RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 RDH11Q8TC12 318 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 STT3BQ8TCJ2 826 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 UTP15Q8TED0 518 aaKnown RBP14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 PPP4R1Q8TF05 950 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 ZNF483Q8TF39 744 aaPredicted RBP14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 GAL3ST3Q96A11 431 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 MIEF2Q96C03 454 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 APOPT1Q96IL0 206 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 MAGEB10Q96LZ2 347 aaPredicted RBP14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 IP6K3Q96PC2 410 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 SMC6Q96SB8 1091 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 SPSB2Q99619 263 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 NTMT1Q9BV86 223 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 SENP1Q9P0U3 644 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 EMCNQ9ULC0 261 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 MAN2B2Q9Y2E5 1009 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 NAALAD2Q9Y3Q0 740 aa14.26□□□□□ -0.13
IGHV3-53-201ENST00000390627 A0A088AWK7 358 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 SGK494L7N484 410 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 OR7A17O14581 309 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 RGS16O15492 202 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 PLIN3O60664 434 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 GALR3O60755 368 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 SUPT7LO94864 414 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 CLDN9O95484 217 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 OTCP00480 354 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 IGHEP01854 428 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 FURINP09958 794 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 ZGLP1P0C6A0 271 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 ZNF10P21506 573 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 OTX2P32243 289 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 SNRPNP63162 240 aaKnown RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 TGM3Q08188 693 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 HYAL2Q12891 473 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 RBBP7Q16576 425 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 DEFB109BQ30KR1 87 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 DEFB134Q4QY38 66 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 ZNF678Q5SXM1 525 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 CEP85LQ5SZL2 805 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 FAM69BQ5VUD6 431 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 TRIM40Q6P9F5 258 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 LRIG3Q6UXM1 1119 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 VN1R5Q7Z5H4 357 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 BANPQ8N9N5 519 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 OR7G3Q8NG95 312 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 ADAMTS17Q8TE56 1095 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 NACC2Q96BF6 587 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 NSUN5Q96P11 429 aaKnown RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 ZIM3Q96PE6 472 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 TMEM237Q96Q45 408 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 UBL7Q96S82 380 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 CRB3Q9BUF7 120 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 TGIF2Q9GZN2 237 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 REXO4Q9GZR2 422 aaKnown RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 SOX17Q9H6I2 414 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 CLK4Q9HAZ1 481 aaKnown RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 ZBTB26Q9HCK0 441 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 SEMA4BQ9NPR2 832 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 SEMA3GQ9NS98 782 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 STK38LQ9Y2H1 464 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 TSC22D4Q9Y3Q8 395 aa14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 KMT2BQ9UMN6 2715 aaPredicted RBP14.25□□□□□ -0.13
IGHV3-53-201ENST00000390627 LRIT2A6NDA9 550 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 H0YIV9 168 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 ERI3O43414 337 aaKnown RBP14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 RDH16O75452 317 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 MLYCDO95822 493 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 UMODP07911 640 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 SMIM10L1P0DMW3 83 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 IMPDH1P20839 514 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 IL10P22301 178 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 HNRNPH1P31943 449 aaKnown RBP14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 CCR10P46092 362 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 CDH13P55290 713 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 RAB8AP61006 207 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 NAA20P61599 178 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 MAT1AQ00266 395 aaKnown RBP14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 CLCQ05315 142 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 TRAF3Q13114 568 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 CPSF6Q16630 551 aaKnown RBP eCLIP14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 TBR1Q16650 682 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 SYT16Q17RD7 645 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 ADPRMQ3LIE5 342 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 GGTA1PQ4G0N0 100 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 UNC50Q53HI1 259 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 VWA2Q5GFL6 755 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 BEND6Q5SZJ8 279 aaPredicted RBP14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 ADNP2Q6IQ32 1131 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 MILR1Q7Z6M3 343 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 PDSS2Q86YH6 399 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 SRFBP1Q8NEF9 429 aaKnown RBP14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 OR2L5Q8NG80 312 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 OR52B6Q8NGF0 335 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 OR51Q1Q8NH59 317 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 ZNF473Q8WTR7 871 aaKnown RBP14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 APOBEC4Q8WW27 367 aaKnown RBP14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 TTC9Q92623 222 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 EXTL1Q92935 676 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 MS4A6EQ96DS6 147 aa14.24□□□□□ -0.13
IGHV3-53-201ENST00000390627 L3HYPDHQ96EM0 354 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms