RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 TUBB6Q9BUF5 446 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 SLC29A3Q9BZD2 475 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 SLC6A16Q9GZN6 736 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 ACSS3Q9H6R3 686 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 ALG9Q9H6U8 611 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 ZBTB20Q9HC78 741 aaPredicted RBP15.89■□□□□ 0.13
HMGN4-201ENST00000377575 NINJ2Q9NZG7 142 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 NUDT4Q9NZJ9 180 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 MAP10Q9P2G4 905 aa15.89■□□□□ 0.13
HMGN4-201ENST00000377575 DMGDHQ9UI17 866 aaKnown RBP15.89■□□□□ 0.13
HMGN4-201ENST00000377575 RELNP78509 3460 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 FLNCQ14315 2725 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 TAPBPO15533 448 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 KERAO60938 352 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 SERPINA6P08185 405 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 TFEBP19484 476 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 JAK1P23458 1154 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 HPDP32754 393 aaPredicted RBP15.88■□□□□ 0.13
HMGN4-201ENST00000377575 HSPA7P48741 367 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 STXBP1P61764 594 aaKnown RBP15.88■□□□□ 0.13
HMGN4-201ENST00000377575 MFAP5Q13361 173 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 INPP5JQ15735 1006 aaPredicted RBP15.88■□□□□ 0.13
HMGN4-201ENST00000377575 PDK4Q16654 411 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 MROH9Q5TGP6 573 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 TMIGD1Q6UXZ0 262 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 Q6ZS92 163 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 LRRC70Q7Z2Q7 622 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.88■□□□□ 0.13
HMGN4-201ENST00000377575 GALNT11Q8NCW6 608 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 UTP15Q8TED0 518 aaKnown RBP15.88■□□□□ 0.13
HMGN4-201ENST00000377575 IFT81Q8WYA0 676 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 MRRFQ96E11 262 aaKnown RBP15.88■□□□□ 0.13
HMGN4-201ENST00000377575 PEX11GQ96HA9 241 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 RBCK1Q9BYM8 510 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 EHD1Q9H4M9 534 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 CLK4Q9HAZ1 481 aaKnown RBP15.88■□□□□ 0.13
HMGN4-201ENST00000377575 ACOT9Q9Y305 439 aa15.88■□□□□ 0.13
HMGN4-201ENST00000377575 CCDC189A1A4V9 331 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 SYCE1LA8MT33 242 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 SUPT3HB4E1H0 165 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 SUPT3HO75486 399 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 FHP07954 510 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 SERPINB8P50452 374 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 EFNA3P52797 238 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 BMPR2Q13873 1038 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 FAM83EQ2M2I3 478 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 PLEKHN1Q494U1 663 aaPredicted RBP15.87■□□□□ 0.13
HMGN4-201ENST00000377575 PRR30Q53SZ7 412 aaPredicted RBP15.87■□□□□ 0.13
HMGN4-201ENST00000377575 TOR1AIP1Q5JTV8 583 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 LANCL3Q6ZV70 420 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 CPEB2Q7Z5Q1 589 aaKnown RBP15.87■□□□□ 0.13
HMGN4-201ENST00000377575 CEP112Q8N8E3 955 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 OR5T3Q8NGG3 340 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 BRIX1Q8TDN6 353 aaKnown RBP15.87■□□□□ 0.13
HMGN4-201ENST00000377575 CREB3L4Q8TEY5 395 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 CCT6BQ92526 530 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 TBC1D20Q96BZ9 403 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 PTCD3Q96EY7 689 aaKnown RBP15.87■□□□□ 0.13
HMGN4-201ENST00000377575 LMF1Q96S06 567 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 EFCAB11Q9BUY7 163 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 CDC42EP4Q9H3Q1 356 aaKnown RBP15.87■□□□□ 0.13
HMGN4-201ENST00000377575 NT5DC2Q9H857 520 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 SNX15Q9NRS6 342 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 IGSF5Q9NSI5 407 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 COPG2Q9UBF2 871 aa15.87■□□□□ 0.13
HMGN4-201ENST00000377575 PTBP2Q9UKA9 531 aaKnown RBP15.87■□□□□ 0.13
HMGN4-201ENST00000377575 RP1L1Q8IWN7 2480 aaPredicted RBP15.87■□□□□ 0.13
HMGN4-201ENST00000377575 CNTRLQ7Z7A1 2325 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 A0A088AWK7 358 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 CCNT2O60583 730 aaKnown RBP15.86■□□□□ 0.13
HMGN4-201ENST00000377575 CDC123O75794 336 aaPredicted RBP15.86■□□□□ 0.13
HMGN4-201ENST00000377575 WFS1O76024 890 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 ACSL3O95573 720 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 ZNF10P21506 573 aaPredicted RBP15.86■□□□□ 0.13
HMGN4-201ENST00000377575 SOX11P35716 441 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 HNF4AP41235 474 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 RHAGQ02094 409 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 HYAL2Q12891 473 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 DLG1Q12959 904 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 LAPTM5Q13571 262 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 ABRAXAS2Q15018 415 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 FBXO48Q5FWF7 155 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 XKR6Q5GH73 641 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 PAGE2BQ5JRK9 111 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 KLC3Q6P597 504 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 LINC00696Q6ZRV3 163 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 TAOK1Q7L7X3 1001 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 ANKRD37Q7Z713 158 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 ISCA2Q86U28 154 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 CUZD1Q86UP6 607 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 DNAJB14Q8TBM8 379 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 UBTD2Q8WUN7 234 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 GAL3ST3Q96A11 431 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 FAR2Q96K12 515 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 CNDP1Q96KN2 507 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 ATOH8Q96SQ7 321 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 FUT8Q9BYC5 575 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 CD244Q9BZW8 370 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 PTGFRNQ9P2B2 879 aa15.86■□□□□ 0.13
HMGN4-201ENST00000377575 PCDHGA10Q9Y5H3 936 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms