RNA–Protein interactions for RNA: ENST00000369733.7

COL17A1-202, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL17A1, Length 5,488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-202ENST00000369733 CPOXP36551 454 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 NR4A2P43354 598 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 GALNTL5Q7Z4T8 443 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 NKD1Q969G9 470 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 SLC30A3Q99726 388 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 STOX2Q9P2F5 926 aaPredicted RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 KELP23276 732 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 MPIP34949 423 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 NOVP48745 357 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 CARD16Q5EG05 197 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 REEP3Q6NUK4 255 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 OR4K1Q8NGD4 311 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 ZCCHC10Q8TBK6 192 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 ACDQ96AP0 544 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 CICQ96RK0 1608 aaPredicted RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 TCRBV3S1A0A5B6 114 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 GMFGO60234 142 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 F8A1P23610 371 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 KCNC4Q03721 635 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 ISCA2Q86U28 154 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 TSPYL5Q86VY4 417 aaPredicted RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 ARMC10Q8N2F6 343 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 FBXO22Q8NEZ5 403 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 PEX13Q92968 403 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 RANBP3Q9H6Z4 567 aaPredicted RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 GPR83Q9NYM4 423 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 PCDHGB6Q9Y5F9 930 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 A0A1W2PRQ8 180 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 NUAK1O60285 661 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 JUNP05412 331 aaKnown RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 SLC35G6P0C7Q6 338 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 PSMD8P48556 350 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 CCR8P51685 355 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 PSMA6P60900 246 aaKnown RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 PRAMEF14Q5SWL7 426 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 GARNL3Q5VVW2 1013 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 PRAMEF13Q5VWM6 474 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 ARFGAP1Q8N6T3 406 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 INO80EQ8NBZ0 244 aaPredicted RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 ZFP90Q8TF47 636 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 TMEM125Q96AQ2 219 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 PIP5K1AQ99755 562 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 ZSCAN5AQ9BUG6 496 aa15.4■□□□□ 0.06
COL17A1-202ENST00000369733 RIOK2Q9BVS4 552 aaKnown RBP15.4■□□□□ 0.06
COL17A1-202ENST00000369733 DUXAA6NLW8 204 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 CENPBD1B2RD01 187 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 GNB5O14775 395 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 B4GAT1O43505 415 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 GIMD1P0DJR0 217 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 GINS1Q14691 196 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 SLC36A3Q495N2 470 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 C22orf42Q6IC83 251 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 QSOX2Q6ZRP7 698 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 ADGRG5Q8IZF4 528 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 SPARTQ8N0X7 666 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 NPWQ8N729 165 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 JPH3Q8WXH2 748 aaPredicted RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 C20orf27Q9GZN8 174 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 MRTO4Q9UKD2 239 aaKnown RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 MYH13Q9UKX3 1938 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 RGPD1P0DJD0 1748 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 C2orf92A0A1B0GVN3 265 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 C5orf51A6NDU8 294 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 VILLO15195 856 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 TCEA1P23193 301 aaKnown RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 RPL10P27635 214 aaKnown RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 ERP29P30040 261 aaKnown RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 PPIGQ13427 754 aaKnown RBP eCLIP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 FATE1Q969F0 183 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 RGMAQ96B86 450 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 CST11Q9H112 138 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 LRRC72A6NJI9 287 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 DUSP11O75319 330 aaKnown RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 EOMESO95936 686 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 GNALP38405 381 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 GRK6P43250 576 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF280AP59817 542 aaPredicted RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 ST3GAL3Q11203 375 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 CDK5R2Q13319 367 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 LRP8Q14114 963 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 HSDL2Q6YN16 418 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 ZNF627Q7L945 461 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 TICAM1Q8IUC6 712 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 MFSD2AQ8NA29 543 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 OR52B6Q8NGF0 335 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 DPH2Q9BQC3 489 aaPredicted RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 OR51B5Q9H339 312 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 OR51I1Q9H343 314 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 SDR39U1Q9NRG7 319 aaPredicted RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 HPF1Q9NWY4 346 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 HEMK1Q9Y5R4 338 aaPredicted RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 AGXTP21549 392 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 CEBPGP53567 150 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 AGTRAPQ6RW13 159 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 CHERPQ8IWX8 916 aaKnown RBP15.39■□□□□ 0.05
COL17A1-202ENST00000369733 GPALPP1Q8IXQ4 340 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 NEIL3Q8TAT5 605 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 ARNTL2Q8WYA1 636 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 CCM2Q9BSQ5 444 aa15.39■□□□□ 0.05
COL17A1-202ENST00000369733 TRPV4Q9HBA0 871 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms