RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 RBM18Q96H35 190 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 C3orf30Q96M34 536 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 PRAP1Q96NZ9 151 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 CRISPLD2Q9H0B8 497 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ADAM30Q9UKF2 790 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 UTS2RQ9UKP6 389 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ITM2BQ9Y287 266 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 KRT87PA6NCN2 255 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 RHPN2P1A8MT19 583 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 H3BNC9 293 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 PPP6CO00743 305 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 SCAMP2O15127 329 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 DENRO43583 198 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 OLFM2O95897 454 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 C8BP07358 591 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 DRD2P14416 443 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 GGT1P19440 569 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 GSTM2P28161 218 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ALDH4A1P30038 563 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 MMP12P39900 470 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ARSFP54793 590 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ITGA1P56199 1179 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 NFE2L1Q14494 772 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 UBXN2BQ14CS0 331 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 TOR1AIP1Q5JTV8 583 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 REEP3Q6NUK4 255 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 NIPAL1Q6NVV3 410 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 LCTLQ6UWM7 567 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 SBSNQ6UWP8 590 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC9B2Q86UD5 537 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 RANBP3LQ86VV4 465 aaPredicted RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 OR7G3Q8NG95 312 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ZCCHC10Q8TBK6 192 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 IPCEF1Q8WWN9 437 aaPredicted RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 FCGR1BQ92637 280 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 TMEM125Q96AQ2 219 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 C1QTNF3Q9BXJ4 246 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 TMEM245Q9H330 911 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ANKHQ9HCJ1 492 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 MS4A12Q9NXJ0 267 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 GSTK1Q9Y2Q3 226 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 RBMX2Q9Y388 322 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 AP1M2Q9Y6Q5 423 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 RLFQ13129 1914 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 A0A0J9YVX5 310 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 EFCAB10A6NFE3 127 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 E7EQ34 232 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 M0QX08 132 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 GPR39O43194 453 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 FZD6O60353 706 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 RASAL1O95294 804 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 C6orf47O95873 294 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 JUNP05412 331 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 RETP07949 1114 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 NR2F6P10588 404 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF12P17014 697 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 KDELR2P33947 212 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 EIF2DP41214 584 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 KCNC1P48547 511 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 CCT3P49368 545 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 CLK3P49761 638 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 TXNL4AP83876 142 aaKnown RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 KCNC4Q03721 635 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 AAK1Q2M2I8 961 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 CEACAM20Q6UY09 585 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 ZNF730Q6ZMV8 503 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 GATAD2AQ86YP4 633 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 OR4E2Q8NGC2 313 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 OR10G2Q8NGC3 310 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 NACC2Q96BF6 587 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 HSH2DQ96JZ2 352 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 KCNC2Q96PR1 638 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 TMEM27Q9HBJ8 222 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 CMTM6Q9NX76 183 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 PLAGL1Q9UM63 463 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 POFUT2Q9Y2G5 429 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 PIAS3Q9Y6X2 628 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 PTPRFP10586 1907 aa5.12□□□□□ -1.59
SMNDC1-202ENST00000369603 BOLA2-SMG1P6H3BVE0 249 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 LSM1O15116 133 aaKnown RBP5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 NME6O75414 186 aaPredicted RBP5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 ALPPP05187 535 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 MTHFD2P13995 350 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 EN2P19622 333 aaPredicted RBP5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 OXTRP30559 389 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 GJA4P35212 333 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 MAGEA8P43361 318 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 CTSCP53634 463 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 OR4D2P58180 307 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 LSM3P62310 102 aaKnown RBP5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 MS4A2Q01362 244 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 TMEM44Q2T9K0 475 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 CYBRD1Q53TN4 286 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 PNCKQ6P2M8 343 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 TMEM207Q6UWW9 146 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 SLC22A15Q8IZD6 547 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 PELI3Q8N2H9 469 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 FAM46DQ8NEK8 389 aa5.11□□□□□ -1.59
SMNDC1-202ENST00000369603 OR52J3Q8NH60 311 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms