RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 SLCO4C1Q6ZQN7 724 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 GPSM1Q86YR5 675 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 CREB3L4Q8TEY5 395 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 PPP4R1Q8TF05 950 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 VPS50Q96JG6 964 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 AGAP4Q96P64 663 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 CYTH2Q99418 400 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 AIF1LQ9BQI0 150 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 RBCK1Q9BYM8 510 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 SLC6A16Q9GZN6 736 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 ZNF700Q9H0M5 742 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 KLHL31Q9H511 634 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 LANCL2Q9NS86 450 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 NINJ2Q9NZG7 142 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 ASB1Q9Y576 335 aa13.62□□□□□ -0.23
HMGN3-202ENST00000344726 SPTBN1Q01082 2364 aaKnown RBP13.62□□□□□ -0.23
HMGN3-202ENST00000344726 IGHV3-20A0A0C4DH32 117 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 C8orf89P0DMQ9 161 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 SMIM10L1P0DMW3 83 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 C1GALT1C1LP0DN25 315 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 ALOX12P18054 663 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 ECHS1P30084 290 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 HNF4AP41235 474 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 HSPA7P48741 367 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 CDC16Q13042 620 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 NAB1Q13506 487 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 BMPR2Q13873 1038 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 HERC3Q15034 1050 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 RBBP5Q15291 538 aaKnown RBP13.61□□□□□ -0.23
HMGN3-202ENST00000344726 LINC00696Q6ZRV3 163 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 ISCA2Q86U28 154 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 KBTBD2Q8IY47 623 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.61□□□□□ -0.23
HMGN3-202ENST00000344726 PDPRQ8NCN5 879 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 CATSPER1Q8NEC5 780 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 BRIX1Q8TDN6 353 aaKnown RBP13.61□□□□□ -0.23
HMGN3-202ENST00000344726 UTP15Q8TED0 518 aaKnown RBP13.61□□□□□ -0.23
HMGN3-202ENST00000344726 TM9SF4Q92544 642 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 KIAA1191Q96A73 305 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 MRRFQ96E11 262 aaKnown RBP13.61□□□□□ -0.23
HMGN3-202ENST00000344726 PEX11GQ96HA9 241 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 SMIM10Q96HG1 83 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 IMMP1LQ96LU5 166 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 IGSF5Q9NSI5 407 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 WWOXQ9NZC7 414 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 PTBP2Q9UKA9 531 aaKnown RBP13.61□□□□□ -0.23
HMGN3-202ENST00000344726 POLEQ07864 2286 aa13.61□□□□□ -0.23
HMGN3-202ENST00000344726 ICE1Q9Y2F5 2266 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 CDC123O75794 336 aaPredicted RBP13.6□□□□□ -0.23
HMGN3-202ENST00000344726 CBX6O95503 412 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 TBX6O95947 436 aaPredicted RBP13.6□□□□□ -0.23
HMGN3-202ENST00000344726 SERPINA7P05543 415 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 ITGAMP11215 1152 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 GNAZP19086 355 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 EPORP19235 508 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 TFEBP19484 476 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 GLRBP48167 497 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 RAB8AP61006 207 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 IRF9Q00978 393 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 RHAGQ02094 409 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 RGS1Q08116 209 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 MFAP5Q13361 173 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 SLBPQ14493 270 aaKnown RBP eCLIP13.6□□□□□ -0.23
HMGN3-202ENST00000344726 CDKL4Q5MAI5 379 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 MFSD4BQ5TF39 518 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 IRAK1BP1Q5VVH5 260 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 HIST2H2BCQ6DN03 193 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 SULT1C3Q6IMI6 304 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 ADNP2Q6IQ32 1131 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 RAPH1Q70E73 1250 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 NAV2Q8IVL1 2488 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 CENPLQ8N0S6 344 aaPredicted RBP13.6□□□□□ -0.23
HMGN3-202ENST00000344726 TBC1D19Q8N5T2 526 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 SIRT6Q8N6T7 355 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 EXT2Q93063 718 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 ATOH8Q96SQ7 321 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 ALG9Q9H6U8 611 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 RIC8BQ9NVN3 520 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 CD274Q9NZQ7 290 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 PTGFRNQ9P2B2 879 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 RNF112Q9ULX5 631 aa13.6□□□□□ -0.23
HMGN3-202ENST00000344726 PCDH17O14917 1159 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 CHST10O43529 356 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 STK16O75716 305 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 SEC24DO94855 1032 aaPredicted RBP13.59□□□□□ -0.23
HMGN3-202ENST00000344726 AGFG2O95081 481 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 SERPINA6P08185 405 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 CYC1P08574 325 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 CD22P20273 847 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 CRABP2P29373 138 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 ZNF169Q14929 603 aaPredicted RBP13.59□□□□□ -0.23
HMGN3-202ENST00000344726 TOR1AIP1Q5JTV8 583 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 FHL5Q5TD97 284 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 MROH9Q5TGP6 573 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 B3GNTL1Q67FW5 361 aaPredicted RBP13.59□□□□□ -0.23
HMGN3-202ENST00000344726 ISLR2Q6UXK2 745 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 TMIGD1Q6UXZ0 262 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 ABHD13Q7L211 337 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 VN1R5Q7Z5H4 357 aa13.59□□□□□ -0.23
HMGN3-202ENST00000344726 CPEB2Q7Z5Q1 589 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms