RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 CRTC3Q6UUV7 619 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 EIF3MQ7L2H7 374 aaKnown RBP15.68■□□□□ 0.1
LITAF-201ENST00000339430 B3GNT8Q7Z7M8 397 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 CFAP206Q8IYR0 622 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 PARP8Q8N3A8 854 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 SYNPOQ8N3V7 929 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 ATG16L2Q8NAA4 619 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 OR4K1Q8NGD4 311 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 OR56A3Q8NH54 315 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 FKBP10Q96AY3 582 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 FOPNLQ96NB1 174 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 ASPSCR1Q9BZE9 553 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 GABARAPL1Q9H0R8 117 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 SIRT5Q9NXA8 310 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 GMPPBQ9Y5P6 360 aa15.68■□□□□ 0.1
LITAF-201ENST00000339430 TICRRQ7Z2Z1 1910 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 H3BM21 787 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 J3QRK9 145 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 K7ESM1 405 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 UGT2B11O75310 529 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 CRYBA2P53672 197 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 TBPL1P62380 186 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 MEF2AQ02078 507 aaPredicted RBP15.67■□□□□ 0.1
LITAF-201ENST00000339430 ZNF385BQ569K4 471 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 CCDC81Q6ZN84 652 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 SLC16A12Q6ZSM3 486 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 TTC29Q8NA56 475 aaPredicted RBP15.67■□□□□ 0.1
LITAF-201ENST00000339430 OR4A15Q8NGL6 344 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 ZNF480Q8WV37 535 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 UBE2FQ969M7 185 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 REEP1Q9H902 201 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 GPN2Q9H9Y4 310 aaPredicted RBP15.67■□□□□ 0.1
LITAF-201ENST00000339430 BRF2Q9HAW0 419 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 RASSF1Q9NS23 344 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 RAPGEFL1Q9UHV5 662 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 TDRKHQ9Y2W6 561 aaKnown RBP15.67■□□□□ 0.1
LITAF-201ENST00000339430 PLK4O00444 970 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 PCDH7O60245 1069 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 INHBBP09529 407 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 FPR1P21462 350 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 IDSP22304 550 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 BMXP51813 675 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 HNRNPFP52597 415 aaKnown RBP15.67■□□□□ 0.1
LITAF-201ENST00000339430 IL18R1Q13478 541 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 ZNF829Q3KNS6 432 aaPredicted RBP15.67■□□□□ 0.1
LITAF-201ENST00000339430 IER5LQ5T953 404 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 GALNT18Q6P9A2 607 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 NAGSQ8N159 534 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 PGBD3Q8N328 593 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 SNRNP27Q8WVK2 155 aaKnown RBP15.67■□□□□ 0.1
LITAF-201ENST00000339430 VPS35Q96QK1 796 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 KCNK12Q9HB15 430 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 KRT84Q9NSB2 600 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 THUMPD1Q9NXG2 353 aaKnown RBP15.67■□□□□ 0.1
LITAF-201ENST00000339430 HCN2Q9UL51 889 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 KCNE2Q9Y6J6 123 aa15.67■□□□□ 0.1
LITAF-201ENST00000339430 TSPAN11A1L157 253 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 C1orf226A1L170 272 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 QSOX1O00391 747 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 NDUFS2O75306 463 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 BCAS1O75363 584 aaPredicted RBP15.66■□□□□ 0.1
LITAF-201ENST00000339430 OPN1SWP03999 348 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 APODP05090 189 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 CCDC159P0C7I6 412 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 FOSL2P15408 326 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 HOXB6P17509 224 aaKnown RBP15.66■□□□□ 0.1
LITAF-201ENST00000339430 TNFRSF1BP20333 461 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 HPCAL1P37235 193 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 GSSP48637 474 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 C21orf59P57076 290 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 MC1RQ01726 317 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 HNRNPA1L2Q32P51 320 aaKnown RBP15.66■□□□□ 0.1
LITAF-201ENST00000339430 ERAP2Q6P179 960 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 ZNF852Q6ZMS4 543 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 SLCO4C1Q6ZQN7 724 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 TRAPPC5Q8IUR0 188 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 SETD9Q8NE22 299 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 FBLIM1Q8WUP2 373 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 CHTF18Q8WVB6 975 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 FAR1Q8WVX9 515 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 POP5Q969H6 163 aaKnown RBP15.66■□□□□ 0.1
LITAF-201ENST00000339430 BORCS5Q969J3 196 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 OR2AG1Q9H205 316 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 TBC1D23Q9NUY8 699 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 EXO1Q9UQ84 846 aaKnown RBP15.66■□□□□ 0.1
LITAF-201ENST00000339430 ZNF451Q9Y4E5 1061 aa15.66■□□□□ 0.1
LITAF-201ENST00000339430 TCF20Q9UGU0 1960 aaKnown RBP15.65■□□□□ 0.1
LITAF-201ENST00000339430 ZNF99A8MXY4 864 aaPredicted RBP15.65■□□□□ 0.1
LITAF-201ENST00000339430 C1orf105O95561 183 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 TGFB1P01137 390 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 ITIH1P19827 911 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 TIA1P31483 386 aaKnown RBP eCLIP15.65■□□□□ 0.13e-10■■□□□ 11.7
LITAF-201ENST00000339430 ASMTP46597 345 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 ZNF33BQ06732 778 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 RGNQ15493 299 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 NPTX1Q15818 432 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 COX20Q5RI15 118 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 EGFLAMQ63HQ2 1017 aa15.65■□□□□ 0.1
LITAF-201ENST00000339430 CAPN13Q6MZZ7 669 aaPredicted RBP15.65■□□□□ 0.1
LITAF-201ENST00000339430 DUS1LQ6P1R4 473 aaKnown RBP15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms