RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 FAM71E1Q6IPT2 247 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 LPCAT2Q7L5N7 544 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 CAMKMTQ7Z624 323 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 CALHM3Q86XJ0 350 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 GOLM1Q8NBJ4 401 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 FBXO30Q8TB52 745 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 NCLNQ969V3 563 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 CCDC115Q96NT0 180 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 SLC29A1Q99808 456 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 MYNNQ9NPC7 610 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 A6NCN8 305 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 SAC3D1A6NKF1 404 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 FAM170BA6NMN3 283 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 CHURC1-FNTBB4DL54 471 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 HAT1O14929 419 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 F3P13726 295 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 BCL6P41182 706 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 MPEG1Q2M385 716 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 LEXMQ3ZCV2 418 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 KIAA1614Q5VZ46 1190 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 WASH2PQ6VEQ5 465 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 ADGRF3Q8IZF5 1079 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 VPS37AQ8NEZ2 397 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 LHX9Q9NQ69 397 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 AGPAT4Q9NRZ5 378 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 ATP6V1HQ9UI12 483 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 PCOLCE2Q9UKZ9 415 aa21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 ARHGEF17Q96PE2 2063 aaPredicted RBP21.44■■□□□ 1.02
PDLIM2-203ENST00000339162 EVPLLA8MZ36 301 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 BTN3A3O00478 584 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 EPN2O95208 641 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 NTRK1P04629 796 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 CHRM5P08912 532 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 THEGLP0DJG4 465 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 UQCRBP14927 111 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 ZNF26P17031 533 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 FASP25445 335 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 BSGP35613 385 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 CCR5P51681 352 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 PLA2G16P53816 162 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 FOLH1Q04609 750 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 GAB1Q13480 694 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 ENPP6Q6UWR7 440 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 AMER3Q8N944 861 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 NETO1Q8TDF5 533 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 FAM162AQ96A26 154 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 PPCDCQ96CD2 204 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 DPH2Q9BQC3 489 aaPredicted RBP21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 SYNPO2LQ9H987 977 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 TRNAU1APQ9NX07 287 aaKnown RBP21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 AHSPQ9NZD4 102 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 FBXL21Q9UKT6 434 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 CASP9P55211 416 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 ILF3Q12906 894 aaKnown RBP eCLIP21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 CATSPER1Q8NEC5 780 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 OR4A15Q8NGL6 344 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 CHID1Q9BWS9 393 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 AICDAQ9GZX7 198 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 ABCG4Q9H172 646 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 SRMSQ9H3Y6 488 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 GORASP2Q9H8Y8 452 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 TPT1P8Q9HAU6 139 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 LTB4R2Q9NPC1 389 aa21.43■■□□□ 1.02
PDLIM2-203ENST00000339162 FANCMQ8IYD8 2048 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 FAM220BPB1ANY3 271 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 NDUFS4O43181 175 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 UMPSP11172 480 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 MAPK12P53778 367 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 HBA1P69905 142 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 PRKCQQ04759 706 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 EIF2B5Q13144 721 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 C16orf72Q14CZ0 275 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 PLCL1Q15111 1095 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 PRRT3Q5FWE3 981 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 ANXA8L1Q5VT79 327 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 IRAK1BP1Q5VVH5 260 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 ZCCHC8Q6NZY4 707 aaKnown RBP21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 UBE3DQ7Z6J8 389 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 TNIP2Q8NFZ5 429 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 OR10Q1Q8NGQ4 319 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 CREB3L4Q8TEY5 395 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 KLHL31Q9H511 634 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 NT5DC2Q9H857 520 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 BTNL2Q9UIR0 455 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 PLXND1Q9Y4D7 1925 aa21.42■■□□□ 1.02
PDLIM2-203ENST00000339162 IGHV1OR15-9A0A0B4J2B8 117 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 PDLIM1O00151 329 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 C6orf47O95873 294 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 TNFP01375 233 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 UBTFL6P0CB48 400 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 SHMT2P34897 504 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 ABHD18Q0P651 414 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 C1orf61Q13536 156 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 N4BP2L2Q92802 583 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 SLC6A18Q96N87 628 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 C17orf62Q9BQA9 187 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 BHLHE41Q9C0J9 482 aaPredicted RBP21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 MIEF1Q9NQG6 463 aa21.41■■□□□ 1.02
PDLIM2-203ENST00000339162 AASDHPPTQ9NRN7 309 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms