RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MTX2O75431 263 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 TBC1D3HP0C7X1 549 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 ERVFC1P60507 584 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 LRRC66Q68CR7 880 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 TBC1D3GQ6DHY5 549 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 TBC1D3CQ6IPX1 549 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 TBC1D3Q8IZP1 549 aaPredicted RBP15.55■□□□□ 0.08
NPHP3-201ENST00000337331 OLIG1Q8TAK6 271 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 SLC9A6Q92581 669 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 ZNF599Q96NL3 588 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 CTPS2Q9NRF8 586 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 CMAHPQ9Y471 501 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 ANKRD66B4E2M5 251 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 ALPLP05186 524 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 LAMP2P13473 410 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 CBLP22681 906 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 CSKP41240 450 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 TATDN3Q17R31 274 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 DPY19L1Q2PZI1 675 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 TRPV1Q8NER1 839 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 ACVR1CQ8NER5 493 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 PHPT1Q9NRX4 125 aaPredicted RBP15.55■□□□□ 0.08
NPHP3-201ENST00000337331 SOHLH2Q9NX45 425 aa15.55■□□□□ 0.08
NPHP3-201ENST00000337331 A0A096LPI6 279 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 HAS3O00219 553 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 CLIC1O00299 241 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 CACNB4O00305 520 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 HPRP00739 348 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 C21orf33P30042 268 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 ADARB1P78563 741 aaKnown RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 SNTA1Q13424 505 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 GPR33Q49SQ1 333 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 KIAA1614Q5VZ46 1190 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 OR2T5Q6IEZ7 315 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 OR6F1Q8NGZ6 308 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 OR2T29Q8NH02 315 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 MEAF6Q9HAF1 191 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 ZIM2Q9NZV7 527 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 STON1Q9Y6Q2 735 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 SAGP10523 405 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 SSTR2P30874 369 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 CRTC2Q53ET0 693 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 IKBIPQ70UQ0 350 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 FAM124AQ86V42 546 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 PIAS4Q8N2W9 510 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 CRELD1Q96HD1 420 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 TMEM138Q9NPI0 162 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 ACOT13Q9NPJ3 140 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 PAK6Q9NQU5 681 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 CITO14578 2027 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 PIRO00625 290 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 TPST2O60704 377 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 GADD45GO95257 159 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 TNFAIP8L2Q6P589 184 aaPredicted RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 ARFGAP1Q8N6T3 406 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 SLC5A11Q8WWX8 675 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 AHCYL2Q96HN2 611 aaKnown RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 TEPSINQ96N21 525 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 OAS3Q9Y6K5 1087 aaKnown RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 LTBP4Q8N2S1 1624 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 SCO2O43819 266 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 F2P00734 622 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 EPHX1P07099 455 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 STOMP27105 288 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 STC1P52823 247 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 RPP38P78345 283 aaKnown RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 NXNL2Q5VZ03 156 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 CES5AQ6NT32 575 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 CYS1Q717R9 158 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 PAPD5Q8NDF8 572 aaKnown RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 OR4F6Q8NGB9 312 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 IL4I1Q96RQ9 567 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 STRA6Q9BX79 667 aa15.54■□□□□ 0.08
NPHP3-201ENST00000337331 NSUN3Q9H649 340 aaKnown RBP15.54■□□□□ 0.08
NPHP3-201ENST00000337331 LCHNA4D1U4 455 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 FAM86C2PA6NEL3 165 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 TRIM64A6NGJ6 449 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 TRIM64BA6NI03 449 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 DFNA5O60443 496 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 ZNF780AO75290 641 aaPredicted RBP15.53■□□□□ 0.08
NPHP3-201ENST00000337331 NME6O75414 186 aaPredicted RBP15.53■□□□□ 0.08
NPHP3-201ENST00000337331 CCNB2O95067 398 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 PRNPP04156 253 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 G6PDP11413 515 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 PCSK2P16519 638 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 PRPS1L1P21108 318 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 DNASE1P24855 282 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 HTR1EP28566 365 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 NUDT1P36639 197 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 PSMD4P55036 377 aaKnown RBP15.53■□□□□ 0.08
NPHP3-201ENST00000337331 ZNF33AQ06730 810 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 HEPACAMQ14CZ8 416 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 CYP27C1Q4G0S4 372 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 CDKL4Q5MAI5 379 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 USP30Q70CQ3 517 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 OTOP2Q7RTS6 562 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 PRSS48Q7RTY5 328 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 FAM220AQ7Z4H9 259 aa15.53■□□□□ 0.08
NPHP3-201ENST00000337331 CEP97Q8IW35 865 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms