RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 ELP5Q8TE02 316 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 TRIB2Q92519 343 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 UGT1A7Q9HAW7 530 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 UGT1A10Q9HAW8 530 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 UGT1A8Q9HAW9 530 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 EPHA6Q9UF33 1036 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 PADI2Q9Y2J8 665 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 MAU2Q9Y6X3 613 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 BORCS7-ASMTA0A0B4J1R7 106 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 ARVCFO00192 962 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 SNNO75324 88 aaPredicted RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 RPS21P63220 83 aaKnown RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 PCBP2Q15366 365 aaKnown RBP eCLIP14.3□□□□□ -0.121e-7■■■■■ 30.1
SEC16A-202ENST00000290037 TAF8Q7Z7C8 310 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 IL12RB2Q99665 862 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 TFECO14948 347 aaPredicted RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 CYP4F2P78329 520 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 VMACQ2NL98 169 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 C5orf46Q6UWT4 87 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 NEK7Q8TDX7 302 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 KLHL5Q96PQ7 755 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 ZNF559Q9BR84 538 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 TPT1P8Q9HAU6 139 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 APOBEC3GQ9HC16 384 aaKnown RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 PIGVQ9NUD9 493 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 PIH1D1Q9NWS0 290 aaKnown RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 ASB6Q9NWX5 421 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 CXorf51AA0A1B0GTR3 108 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 DLX3O60479 287 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 FOXN2P32314 431 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 SLC9A6Q92581 669 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 MSI1O43347 362 aaKnown RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 CLEC6AQ6EIG7 209 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 BLOC1S3Q6QNY0 202 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 METAP1DQ6UB28 335 aaPredicted RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 HS3ST5Q8IZT8 346 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 DDX1Q92499 740 aaKnown RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 EXOC2Q96KP1 924 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 PELI2Q9HAT8 420 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 C1orf226A1L170 272 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 M0R129 80 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 FZD9O00144 591 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 CTC1Q2NKJ3 1217 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 WDR45BQ5MNZ6 344 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 DCP2Q8IU60 420 aaKnown RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 RGS17Q9UGC6 210 aaPredicted RBP14.3□□□□□ -0.12
SEC16A-202ENST00000290037 UBL4AP11441 157 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 ACTR1AP61163 376 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 WSCD2Q2TBF2 565 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 TMBIM1Q969X1 311 aa14.3□□□□□ -0.12
SEC16A-202ENST00000290037 SOD2P04179 222 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 C8AP07357 584 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 ACPPP15309 386 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CDH11P55287 796 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 RALGDSQ12967 914 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 SLBPQ14493 270 aaKnown RBP eCLIP14.29□□□□□ -0.12
SEC16A-202ENST00000290037 GPR151Q8TDV0 419 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 PMM1Q92871 262 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 HERPUD2Q9BSE4 406 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 LCN1P31025 176 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CMTR2Q8IYT2 770 aaKnown RBP14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CYP4X1Q8N118 509 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.29□□□□□ -0.12
SEC16A-202ENST00000290037 TMEM189-UBE2V1I3L0A0 370 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 ENGP17813 658 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CYBRD1Q53TN4 286 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 GPR65Q8IYL9 337 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 VANGL1Q8TAA9 524 aaPredicted RBP14.29□□□□□ -0.12
SEC16A-202ENST00000290037 IRF7Q92985 503 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CPQQ9Y646 472 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 FLRT2O43155 660 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CDC40O60508 579 aaKnown RBP eCLIP14.29□□□□□ -0.122e-6■□□□□ 8.5
SEC16A-202ENST00000290037 HAPLN1P10915 354 aaPredicted RBP14.29□□□□□ -0.12
SEC16A-202ENST00000290037 HTR3AP46098 478 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 TSPAN5P62079 268 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 LRP8Q14114 963 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 DSC3Q14574 896 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 UBQLNLQ8IYU4 475 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 OR8H1Q8NGG4 311 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 ABCD2Q9UBJ2 740 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 SUSD2Q9UGT4 822 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CLCA3PQ9Y6N3 262 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 TMEM74Q96NL1 305 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 ZDHHC7Q9NXF8 308 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 NHSL1Q5SYE7 1610 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CSNK1DP48730 415 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CLDN8P56748 225 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 CREB5Q02930 508 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 TGFBIQ15582 683 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 SLC30A6Q6NXT4 461 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 FBXL22Q6P050 247 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 LRRC69Q6ZNQ3 347 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 C15orf39Q6ZRI6 1047 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 OR5T3Q8NGG3 340 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 OR5L2Q8NGL0 311 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 KCTD12Q96CX2 325 aaKnown RBP14.29□□□□□ -0.12
SEC16A-202ENST00000290037 IL4I1Q96RQ9 567 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 NPAP1Q9NZP6 1156 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 KCNIP3Q9Y2W7 256 aa14.29□□□□□ -0.12
SEC16A-202ENST00000290037 HTR1AP08908 422 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms