RNA–Protein interactions for RNA: ENST00000248958.4

SDF2L1-201, Transcript of stromal cell derived factor 2 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2L1, Length 865 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2L1-201ENST00000248958 ASB1Q9Y576 335 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 HEMK1Q9Y5R4 338 aaPredicted RBP23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 MED13Q9UHV7 2174 aa23.05■■□□□ 1.28
SDF2L1-201ENST00000248958 IDSB3KWA1 339 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 SGK494L7N484 410 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 SOX8P57073 446 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 HYAL2Q12891 473 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 AIMP2Q13155 320 aaKnown RBP23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 KIRREL2Q6UWL6 708 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 LAPTM4BQ86VI4 370 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 PDSS2Q86YH6 399 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 HPS6Q86YV9 775 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 ACMSDQ8TDX5 336 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 OR1F2PQ96R84 312 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 MRPL57Q9BQC6 102 aaKnown RBP23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 RHBGQ9H310 441 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 ZNF71Q9NQZ8 489 aaPredicted RBP23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 ZNF358Q9NW07 568 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 XPR1Q9UBH6 696 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 TP53TG5Q9Y2B4 290 aa23.04■■□□□ 1.28
SDF2L1-201ENST00000248958 FFAR3O14843 346 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 GPR42O15529 346 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 PRAMEF4O60810 478 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 SMIM24O75264 130 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 WFS1O76024 890 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 ZNF888P0CJ79 500 aaPredicted RBP23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 SMIM10L1P0DMW3 83 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 ACPPP15309 386 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 EPORP19235 508 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 XCR1P46094 333 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 PGDP52209 483 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 SNRPNP63162 240 aaKnown RBP23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 TOR1AIP1Q5JTV8 583 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 PRAMEF9Q5VWM5 478 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 TMEM151BQ8IW70 566 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 TEX9Q8N6V9 391 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 GAL3ST3Q96A11 431 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 SMIM10Q96HG1 83 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 MRPL46Q9H2W6 279 aaKnown RBP23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 GPR83Q9NYM4 423 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 HCN3Q9P1Z3 774 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 FBXL4Q9UKA2 621 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 MKL2Q9ULH7 1088 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 ZNF451Q9Y4E5 1061 aa23.03■■□□□ 1.28
SDF2L1-201ENST00000248958 A0A088AWK7 358 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 A0A1W2PQ72 361 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 STX16-NPEPL1H3BU86 382 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 STX16O14662 325 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 UGDHO60701 494 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 RDH16O75452 317 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 ZNF10P21506 573 aaPredicted RBP23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 SERPINB1P30740 379 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 DEFB134Q4QY38 66 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 ASB18Q6ZVZ8 466 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 ZNF605Q86T29 641 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 GALNT16Q8N428 558 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 FDCSPQ8NFU4 85 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 OR11G2Q8NGC1 345 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 METTL21AQ8WXB1 218 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 CCT6BQ92526 530 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 ADGRE2Q9UHX3 823 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 ANAPC2Q9UJX6 822 aa23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 ZNF490Q9ULM2 529 aaPredicted RBP23.02■■□□□ 1.28
SDF2L1-201ENST00000248958 ALOX12BO75342 701 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 HPP00738 406 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 CD22P20273 847 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 HNF4AP41235 474 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 MYBPC3Q14896 1274 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 LIPJQ5W064 366 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 GRHL2Q6ISB3 625 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 MED27Q6P2C8 311 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 PTGR2Q8N8N7 351 aaPredicted RBP23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 FAR2Q96K12 515 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 C5AR2Q9P296 337 aa23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 C19orf25Q9UFG5 118 aaPredicted RBP23.01■■□□□ 1.27
SDF2L1-201ENST00000248958 LOC102723996A0A087X1L8 192 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 LRIT2A6NDA9 550 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 RAB8AP61006 207 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 TGM3Q08188 693 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 KLRB1Q12918 225 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 GTF2H2Q13888 395 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 RASA2Q15283 850 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 ADPRMQ3LIE5 342 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 MFSD4BQ5TF39 518 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 GTF2H2CQ6P1K8 395 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 WDR93Q6P2C0 686 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 TMEM205Q6UW68 189 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 NDUFAF7Q7L592 441 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 TDRPQ86YL5 185 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 LAS2Q8IYD9 372 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 SRFBP1Q8NEF9 429 aaKnown RBP23■■□□□ 1.27
SDF2L1-201ENST00000248958 MS4A6EQ96DS6 147 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 SMAD5Q99717 465 aaKnown RBP23■■□□□ 1.27
SDF2L1-201ENST00000248958 KLHL31Q9H511 634 aa23■■□□□ 1.27
SDF2L1-201ENST00000248958 PIEZO2Q9H5I5 2752 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 A6NL46 340 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 E2F3O00716 465 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 ALPPP05187 535 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 GSTA1P08263 222 aa22.99■■□□□ 1.27
SDF2L1-201ENST00000248958 C8orf89P0DMQ9 161 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms