RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 WWP2O00308 870 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 SCAMP2O15127 329 aaKnown RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 RGS5O15539 181 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 GPX5O75715 221 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 CHRM5P08912 532 aaPredicted RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 OR56A5P0C7T3 313 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 PRKAR2AP13861 404 aaKnown RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 HOXB6P17509 224 aaKnown RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 IDSP22304 550 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 FEN1P39748 380 aaKnown RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 OR2B6P58173 313 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 PRKCDQ05655 676 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 LEXMQ3ZCV2 418 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 SPANXN2Q5MJ10 180 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 RETSATQ6NUM9 610 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 TUBA3EQ6PEY2 450 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 OTOP2Q7RTS6 562 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 NRARPQ7Z6K4 114 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 THOC6Q86W42 341 aaKnown RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 FAM9CQ8IZT9 166 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 CIDECQ96AQ7 238 aaPredicted RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 MGLLQ99685 303 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 EXO1Q9UQ84 846 aaKnown RBP13.49□□□□□ -0.25
USH1C-201ENST00000005226 MAP4K5Q9Y4K4 846 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 N6AMT1Q9Y5N5 214 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 TET1Q8NFU7 2136 aa13.49□□□□□ -0.25
USH1C-201ENST00000005226 ZW10O43264 779 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 CBSLP0DN79 551 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 CBSP35520 551 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 TUFMP49411 452 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 ACLYP53396 1101 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 FKBP1BP68106 108 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 HBA1P69905 142 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 DMPKQ09013 629 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 PTGES3Q15185 160 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 UAP1L1Q3KQV9 507 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 METTL2BQ6P1Q9 378 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 BCDIN3DQ7Z5W3 292 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 DCAF4L2Q8NA75 395 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 WDR20Q8TBZ3 569 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 VOPP1Q96AW1 172 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 CEP44Q9C0F1 390 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 DDX28Q9NUL7 540 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 MUTYHQ9UIF7 546 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 PRAMEF33A0A0G2JMD5 474 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 ARHGAP33O14559 1287 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 PRAMEF10O60809 474 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 RPLP2P05387 115 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 TNFSF8P32971 234 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 SOX3P41225 446 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 PREPP48147 710 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 CSNK2BP67870 215 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 LMAN2Q12907 356 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 MICAQ29983 383 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 NANOGNBQ7Z5D8 188 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 WDR53Q7Z5U6 358 aaPredicted RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 NPAS3Q8IXF0 933 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 HJURPQ8NCD3 748 aaPredicted RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 C11orf65Q8NCR3 313 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 OR4C15Q8NGM1 316 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 WDR36Q8NI36 951 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 CEP19Q96LK0 163 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 OR4K3Q96R72 315 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 ZIC5Q96T25 663 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 C2orf49Q9BVC5 232 aaPredicted RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 VN1R3Q9BXE9 311 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 RERGLQ9H628 205 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 RETREG1Q9H6L5 497 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 CLEC2DQ9UHP7 191 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 LRFN2Q9ULH4 789 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 RUVBL1Q9Y265 456 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 PADI2Q9Y2J8 665 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 MGAT4DA6NG13 374 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 AGAP14A8MT82 685 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 H3BQ06 376 aaPredicted RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 C6orf47O95873 294 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 C8GP07360 202 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 S100A1P23297 94 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 TAB1Q15750 504 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 SSX1Q16384 188 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 MSANTD1Q6ZTZ1 278 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 TMEM150AQ86TG1 271 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 POP5Q969H6 163 aaKnown RBP13.48□□□□□ -0.25
USH1C-201ENST00000005226 FAM129BQ96TA1 746 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 ZDHHC6Q9H6R6 413 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 TBC1D24Q9ULP9 559 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 PEX16Q9Y5Y5 336 aa13.48□□□□□ -0.25
USH1C-201ENST00000005226 FRMPD3Q5JV73 1810 aa13.47□□□□□ -0.25
USH1C-201ENST00000005226 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.47□□□□□ -0.25
USH1C-201ENST00000005226 PDZK1P1A8MUH7 402 aa13.47□□□□□ -0.25
USH1C-201ENST00000005226 ARHGEF33A8MVX0 844 aa13.47□□□□□ -0.25
USH1C-201ENST00000005226 TFECO14948 347 aaPredicted RBP13.47□□□□□ -0.25
USH1C-201ENST00000005226 GREM1O60565 184 aa13.47□□□□□ -0.25
USH1C-201ENST00000005226 GASTP01350 101 aa13.47□□□□□ -0.25
USH1C-201ENST00000005226 KRT8P05787 483 aa13.47□□□□□ -0.25
USH1C-201ENST00000005226 CYP2A7P20853 494 aa13.47□□□□□ -0.25
USH1C-201ENST00000005226 SERPINA4P29622 427 aa13.47□□□□□ -0.25
USH1C-201ENST00000005226 CNR2P34972 360 aa13.47□□□□□ -0.25
USH1C-201ENST00000005226 RPS19P39019 145 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms