RNA–Protein interactions for RNA: ENST00000624683.1

KDM4B-212, Transcript of lysine demethylase 4B, humanhuman

Gene KDM4B, Length 5,076 nt, Biotype TEC, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-212ENST00000624683 SSFA2P28290 1259 aa17.05■□□□□ 0.32
KDM4B-212ENST00000624683 PIP4K2AP48426 406 aaPredicted RBP17.05■□□□□ 0.32
KDM4B-212ENST00000624683 MAST1Q9Y2H9 1570 aa17.05■□□□□ 0.32
KDM4B-212ENST00000624683 NAP1L1P55209 391 aaKnown RBP17.05■□□□□ 0.32
KDM4B-212ENST00000624683 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
KDM4B-212ENST00000624683 ANKRD44Q8N8A2 993 aa17.04■□□□□ 0.32
KDM4B-212ENST00000624683 TNPO1Q92973 898 aaKnown RBP17.04■□□□□ 0.32
KDM4B-212ENST00000624683 ZBTB3Q9H5J0 574 aa17.04■□□□□ 0.32
KDM4B-212ENST00000624683 NOL7Q9UMY1 257 aaKnown RBP17.04■□□□□ 0.32
KDM4B-212ENST00000624683 SYCE3A1L190 88 aa17.04■□□□□ 0.32
KDM4B-212ENST00000624683 SERPINC1P01008 464 aa17.04■□□□□ 0.32
KDM4B-212ENST00000624683 ZFYVE9O95405 1425 aa17.04■□□□□ 0.32
KDM4B-212ENST00000624683 EPS15P42566 896 aa17.04■□□□□ 0.32
KDM4B-212ENST00000624683 TRMT112Q9UI30 125 aaKnown RBP17.04■□□□□ 0.32
KDM4B-212ENST00000624683 TSHZ3Q63HK5 1081 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 WASF1Q92558 559 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 SNRPA1P09661 255 aaKnown RBP17.03■□□□□ 0.32
KDM4B-212ENST00000624683 DACH1Q9UI36 760 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 YTHDC2Q9H6S0 1430 aaKnown RBP17.03■□□□□ 0.32
KDM4B-212ENST00000624683 ESPNB1AK53 854 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 HMGB1P09429 215 aaKnown RBP17.03■□□□□ 0.32
KDM4B-212ENST00000624683 ATP2B2Q01814 1243 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 MPNDQ8N594 471 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 NPC1L1Q9UHC9 1359 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 CCDC66A2RUB6 948 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 OFD1O75665 1012 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 TNNQ9UQP3 1299 aa17.03■□□□□ 0.32
KDM4B-212ENST00000624683 VAMP4O75379 141 aa17.02■□□□□ 0.32
KDM4B-212ENST00000624683 CEP57L1Q8IYX8 460 aa17.02■□□□□ 0.32
KDM4B-212ENST00000624683 MAGEC2Q9UBF1 373 aaPredicted RBP17.02■□□□□ 0.32
KDM4B-212ENST00000624683 RLBP1P12271 317 aa17.02■□□□□ 0.32
KDM4B-212ENST00000624683 CHRNA2Q15822 529 aa17.02■□□□□ 0.32
KDM4B-212ENST00000624683 UBE3BQ7Z3V4 1068 aa17.02■□□□□ 0.32
KDM4B-212ENST00000624683 RHPN1Q8TCX5 695 aa17.02■□□□□ 0.32
KDM4B-212ENST00000624683 SMARCE1Q969G3 411 aa17.02■□□□□ 0.32
KDM4B-212ENST00000624683 CHPF2Q9P2E5 772 aa17.02■□□□□ 0.32
KDM4B-212ENST00000624683 FLT4P35916 1363 aa17.02■□□□□ 0.32
KDM4B-212ENST00000624683 ATP5J2-PTCD1G3V325 749 aa17.02■□□□□ 0.31
KDM4B-212ENST00000624683 MAP3K11Q16584 847 aa17.02■□□□□ 0.31
KDM4B-212ENST00000624683 CWC15Q9P013 229 aaKnown RBP17.02■□□□□ 0.31
KDM4B-212ENST00000624683 BRPF1P55201 1214 aaPredicted RBP17.02■□□□□ 0.31
KDM4B-212ENST00000624683 MTHFSDQ2M296 383 aaKnown RBP17.02■□□□□ 0.31
KDM4B-212ENST00000624683 TEX13AQ9BXU3 409 aaPredicted RBP17.01■□□□□ 0.31
KDM4B-212ENST00000624683 PHACTR3Q96KR7 559 aa17.01■□□□□ 0.31
KDM4B-212ENST00000624683 BCL11BQ9C0K0 894 aaPredicted RBP17.01■□□□□ 0.31
KDM4B-212ENST00000624683 SCAND2PQ9GZW5 306 aaPredicted RBP17.01■□□□□ 0.31
KDM4B-212ENST00000624683 CWC25Q9NXE8 425 aaPredicted RBP17.01■□□□□ 0.31
KDM4B-212ENST00000624683 SDSP20132 328 aa17.01■□□□□ 0.31
KDM4B-212ENST00000624683 SOGA3Q5TF21 947 aa17.01■□□□□ 0.31
KDM4B-212ENST00000624683 ATP7AQ04656 1500 aa17.01■□□□□ 0.31
KDM4B-212ENST00000624683 ANKRD18BA2A2Z9 1011 aa17.01■□□□□ 0.31
KDM4B-212ENST00000624683 EXOC5O00471 708 aa17■□□□□ 0.31
KDM4B-212ENST00000624683 TSPYL6Q8N831 410 aa17■□□□□ 0.31
KDM4B-212ENST00000624683 ANKRD13DQ6ZTN6 518 aa17■□□□□ 0.31
KDM4B-212ENST00000624683 NAPBQ9H115 298 aa17■□□□□ 0.31
KDM4B-212ENST00000624683 MAGI3Q5TCQ9 1506 aa17■□□□□ 0.31
KDM4B-212ENST00000624683 CAVIN4Q5BKX8 364 aa17■□□□□ 0.31
KDM4B-212ENST00000624683 AKAP4Q5JQC9 854 aa17■□□□□ 0.31
KDM4B-212ENST00000624683 ANO8Q9HCE9 1232 aaPredicted RBP17■□□□□ 0.31
KDM4B-212ENST00000624683 MAP3K12Q12852 859 aa16.99■□□□□ 0.31
KDM4B-212ENST00000624683 ADAMTS2O95450 1211 aa16.99■□□□□ 0.31
KDM4B-212ENST00000624683 GPTP24298 496 aa16.99■□□□□ 0.31
KDM4B-212ENST00000624683 PDE1AP54750 535 aa16.99■□□□□ 0.31
KDM4B-212ENST00000624683 CCAR1Q8IX12 1150 aaKnown RBP16.99■□□□□ 0.31
KDM4B-212ENST00000624683 C8orf34Q49A92 452 aa16.99■□□□□ 0.31
KDM4B-212ENST00000624683 TTLL5Q6EMB2 1281 aa16.99■□□□□ 0.31
KDM4B-212ENST00000624683 SLC5A1P13866 664 aa16.98■□□□□ 0.31
KDM4B-212ENST00000624683 ATP8B2P98198 1209 aa16.98■□□□□ 0.31
KDM4B-212ENST00000624683 ZMYM3Q14202 1370 aa16.98■□□□□ 0.31
KDM4B-212ENST00000624683 KRT18P05783 430 aaKnown RBP16.98■□□□□ 0.31
KDM4B-212ENST00000624683 STIM1Q13586 685 aa16.98■□□□□ 0.31
KDM4B-212ENST00000624683 GOLIM4O00461 696 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 ZNF213O14771 459 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 ZPR1O75312 459 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 CCDC183Q5T5S1 534 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 ALDH1L1O75891 902 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 CAMK4Q16566 473 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 CCDC112Q8NEF3 446 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 LARP6Q9BRS8 491 aaKnown RBP16.97■□□□□ 0.31
KDM4B-212ENST00000624683 MINDY4BA8MYZ0 360 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 CBFA2T2O43439 604 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 ZBTB40Q9NUA8 1239 aa16.97■□□□□ 0.31
KDM4B-212ENST00000624683 CAGE1Q8TC20 777 aa16.96■□□□□ 0.31
KDM4B-212ENST00000624683 NCKAP5LQ9HCH0 1330 aa16.96■□□□□ 0.31
KDM4B-212ENST00000624683 LDHAL6AQ6ZMR3 332 aa16.96■□□□□ 0.31
KDM4B-212ENST00000624683 ZSCAN30Q86W11 494 aa16.96■□□□□ 0.31
KDM4B-212ENST00000624683 PPFIBP1Q86W92 1011 aa16.96■□□□□ 0.31
KDM4B-212ENST00000624683 XAGE3Q8WTP9 111 aa16.96■□□□□ 0.31
KDM4B-212ENST00000624683 C8orf76Q96K31 380 aa16.96■□□□□ 0.31
KDM4B-212ENST00000624683 EYA1Q99502 592 aa16.96■□□□□ 0.31
KDM4B-212ENST00000624683 CEP170Q5SW79 1584 aa16.96■□□□□ 0.31
KDM4B-212ENST00000624683 NPHP3Q7Z494 1330 aa16.95■□□□□ 0.3
KDM4B-212ENST00000624683 KSR2Q6VAB6 950 aa16.95■□□□□ 0.3
KDM4B-212ENST00000624683 JARID2Q92833 1246 aaPredicted RBP16.95■□□□□ 0.3
KDM4B-212ENST00000624683 KRT24Q2M2I5 525 aa16.95■□□□□ 0.3
KDM4B-212ENST00000624683 COPS6Q7L5N1 327 aa16.95■□□□□ 0.3
KDM4B-212ENST00000624683 CCDC196A0A1B0GTZ2 297 aa16.95■□□□□ 0.3
KDM4B-212ENST00000624683 RBM5P52756 815 aaKnown RBP eCLIP16.95■□□□□ 0.3
KDM4B-212ENST00000624683 DCTPP1Q9H773 170 aa16.95■□□□□ 0.3
KDM4B-212ENST00000624683 CEP131Q9UPN4 1083 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms