RNA–Protein interactions for RNA: ENST00000623539.1

AP000648.3-201, humanhuman

BASIC

Gene AP000648.3, Length 4,507 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000648.3-201ENST00000623539 GAS6Q14393 721 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 B4GALNT3Q6L9W6 998 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 MAP4K3Q8IVH8 894 aa2.83□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L3A6NCW0 530 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L4A6NCW7 530 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L2Q6R6M4 530 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L1Q7RTZ2 530 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 ZSCAN1Q8NBB4 408 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 ZNF837Q96EG3 531 aaPredicted RBP2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 ZSCAN10Q96SZ4 725 aaPredicted RBP2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 PURBQ96QR8 312 aaKnown RBP2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 SEC13P55735 322 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 LINC00114Q6XXX2 140 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 ANKMY2Q8IV38 441 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 WNT8BQ93098 351 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 PBXIP1Q96AQ6 731 aa2.82□□□□□ -1.96
AP000648.3-201ENST00000623539 ATP4AP20648 1035 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 CTSOP43234 321 aaPredicted RBP2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 OIP5O43482 229 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 NOS2P35228 1153 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 ZDHHC1Q8WTX9 485 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L15C9J2P7 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L10C9JJH3 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L13C9JLJ4 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L12C9JPN9 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L11C9JVI0 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L21D6R901 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L18D6R9N7 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L22D6RA61 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L17D6RBQ6 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L19D6RCP7 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L20D6RJB6 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 GMPRP36959 345 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 KRT76Q01546 638 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 USP17L24Q0WX57 530 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 C4orf17Q53FE4 359 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 SCARF2Q96GP6 870 aaPredicted RBP2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 GDPD2Q9HCC8 539 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 PHF20L1A8MW92 1017 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 GTF2IP78347 998 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 DBN1Q16643 649 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 CSPP1Q1MSJ5 1256 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 TMPRSS4Q9NRS4 437 aa2.81□□□□□ -1.96
AP000648.3-201ENST00000623539 BMP2P12643 396 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 HDGFL1Q5TGJ6 251 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 GLMNQ92990 594 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 PMEPA1Q969W9 287 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 DNMT3AQ9Y6K1 912 aaPredicted RBP2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 PTPN12Q05209 780 aaKnown RBP2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 OCLNQ16625 522 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 ZNF468Q5VIY5 522 aaPredicted RBP2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 LARP1Q6PKG0 1096 aaKnown RBP2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 Q6ZS46 218 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 CNKSR1Q969H4 720 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 TRERF1Q96PN7 1200 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 SOX17Q9H6I2 414 aaPredicted RBP2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 TIMMDC1Q9NPL8 285 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 GTF3C3Q9Y5Q9 886 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 GPR161Q8N6U8 529 aaKnown RBP2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 ALKBH8Q96BT7 664 aaKnown RBP2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 NUCKS1Q9H1E3 243 aaKnown RBP2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 AGERQ15109 404 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 NBPF1Q3BBV0 1214 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 C11orf91Q3C1V1 193 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 C20orf204Q6ZNR8 217 aa2.8□□□□□ -1.96
AP000648.3-201ENST00000623539 TGFBR3LH3BV60 316 aa2.79□□□□□ -1.96
AP000648.3-201ENST00000623539 KIF4AO95239 1232 aa2.79□□□□□ -1.96
AP000648.3-201ENST00000623539 FRMD6Q96NE9 622 aa2.79□□□□□ -1.96
AP000648.3-201ENST00000623539 TATP17735 454 aaPredicted RBP2.79□□□□□ -1.96
AP000648.3-201ENST00000623539 CLDN10P78369 228 aa2.79□□□□□ -1.96
AP000648.3-201ENST00000623539 CXXC1Q9P0U4 656 aaPredicted RBP2.79□□□□□ -1.96
AP000648.3-201ENST00000623539 CELA2BP08218 269 aaPredicted RBP2.79□□□□□ -1.96
AP000648.3-201ENST00000623539 TBC1D9Q6ZT07 1266 aa2.79□□□□□ -1.96
AP000648.3-201ENST00000623539 TRAIPQ9BWF2 469 aa2.79□□□□□ -1.96
AP000648.3-201ENST00000623539 SERTM1A2A2V5 107 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 C21orf2O43822 256 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 VAC14Q08AM6 782 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 CBLBQ13191 982 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 KLRG1Q96E93 195 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 ERBB4Q15303 1308 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 NEFLP07196 543 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 SCTRP47872 440 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 MUC3BQ9H195 1237 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 TMEM88BA6NKF7 163 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 SKIP12755 728 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 SF3B2Q13435 895 aaKnown RBP2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 CHMP3Q9Y3E7 222 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 ATAD2Q6PL18 1390 aa2.78□□□□□ -1.96
AP000648.3-201ENST00000623539 COL9A3Q14050 684 aaPredicted RBP2.78□□□□□ -1.97
AP000648.3-201ENST00000623539 POM121Q96HA1 1249 aa2.78□□□□□ -1.97
AP000648.3-201ENST00000623539 ADAM19Q9H013 955 aa2.78□□□□□ -1.97
AP000648.3-201ENST00000623539 FGD1P98174 961 aa2.77□□□□□ -1.97
AP000648.3-201ENST00000623539 KCNA1Q09470 495 aa2.77□□□□□ -1.97
AP000648.3-201ENST00000623539 TRPM4Q8TD43 1214 aa2.77□□□□□ -1.97
AP000648.3-201ENST00000623539 ZFYVE1Q9HBF4 777 aa2.77□□□□□ -1.97
AP000648.3-201ENST00000623539 ATXN7O15265 892 aaPredicted RBP2.77□□□□□ -1.97
AP000648.3-201ENST00000623539 EPXP11678 715 aa2.77□□□□□ -1.97
AP000648.3-201ENST00000623539 VEGFBP49765 207 aa2.77□□□□□ -1.97
AP000648.3-201ENST00000623539 EFHC2Q5JST6 749 aa2.77□□□□□ -1.97
AP000648.3-201ENST00000623539 ALKBH2Q6NS38 261 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms