RNA–Protein interactions for RNA: ENST00000620552.4

AGRN-210, Transcript of agrin, humanhuman

TSL 5 BASIC

Gene AGRN, Length 7,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-210ENST00000620552 TMEM87AQ8NBN3 555 aa16.48■□□□□ 0.23
AGRN-210ENST00000620552 CCDC97Q96F63 343 aaPredicted RBP16.48■□□□□ 0.23
AGRN-210ENST00000620552 UPF3BQ9BZI7 483 aaKnown RBP16.48■□□□□ 0.23
AGRN-210ENST00000620552 CTCFLQ8NI51 663 aaPredicted RBP16.47■□□□□ 0.23
AGRN-210ENST00000620552 WDR70Q9NW82 654 aa16.47■□□□□ 0.23
AGRN-210ENST00000620552 SSRP1Q08945 709 aaKnown RBP16.47■□□□□ 0.23
AGRN-210ENST00000620552 CCDC191Q8NCU4 936 aa16.47■□□□□ 0.23
AGRN-210ENST00000620552 DNAAF4Q8WXU2 420 aa16.47■□□□□ 0.23
AGRN-210ENST00000620552 FEZ1Q99689 392 aa16.47■□□□□ 0.23
AGRN-210ENST00000620552 CHRNA2Q15822 529 aa16.47■□□□□ 0.23
AGRN-210ENST00000620552 ACSBG1Q96GR2 724 aa16.47■□□□□ 0.23
AGRN-210ENST00000620552 FANCAO15360 1455 aa16.46■□□□□ 0.23
AGRN-210ENST00000620552 SMTNL1A8MU46 457 aa16.46■□□□□ 0.23
AGRN-210ENST00000620552 FAM193AP78312 1265 aa16.46■□□□□ 0.23
AGRN-210ENST00000620552 ATP5J2-PTCD1G3V325 749 aa16.46■□□□□ 0.23
AGRN-210ENST00000620552 TAX1BP1Q86VP1 789 aa16.46■□□□□ 0.23
AGRN-210ENST00000620552 CCDC184Q52MB2 194 aa16.46■□□□□ 0.23
AGRN-210ENST00000620552 EHMT1Q9H9B1 1298 aa16.46■□□□□ 0.23
AGRN-210ENST00000620552 CFAP65Q6ZU64 1925 aaKnown RBP16.46■□□□□ 0.23
AGRN-210ENST00000620552 TRMT1LQ7Z2T5 733 aaKnown RBP16.46■□□□□ 0.22
AGRN-210ENST00000620552 CCDC144CPQ8IYA2 1237 aa16.46■□□□□ 0.22
AGRN-210ENST00000620552 TSG101Q99816 390 aa16.46■□□□□ 0.22
AGRN-210ENST00000620552 CWC25Q9NXE8 425 aaPredicted RBP16.45■□□□□ 0.22
AGRN-210ENST00000620552 ABCC5O15440 1437 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 NOS1P29475 1434 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 CCDC196A0A1B0GTZ2 297 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 NLRP5P59047 1200 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 KLHL10Q6JEL2 608 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 ANKRD24Q8TF21 1146 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 VAT1LQ9HCJ6 419 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 GRIN2AQ12879 1464 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 JAKMIP3Q5VZ66 844 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 CATIPQ7Z7H3 387 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
AGRN-210ENST00000620552 DBF4Q9UBU7 674 aaPredicted RBP16.45■□□□□ 0.22
AGRN-210ENST00000620552 ADGRF5Q8IZF2 1346 aa16.45■□□□□ 0.22
AGRN-210ENST00000620552 IFIT3O14879 490 aaKnown RBP16.44■□□□□ 0.22
AGRN-210ENST00000620552 PPP1R42Q7Z4L9 355 aa16.44■□□□□ 0.22
AGRN-210ENST00000620552 MSH6P52701 1360 aa16.44■□□□□ 0.22
AGRN-210ENST00000620552 CCDC150Q8NCX0 1101 aa16.44■□□□□ 0.22
AGRN-210ENST00000620552 EPB41L2O43491 1005 aaKnown RBP16.44■□□□□ 0.22
AGRN-210ENST00000620552 JARID2Q92833 1246 aaPredicted RBP16.44■□□□□ 0.22
AGRN-210ENST00000620552 TSPYL1Q9H0U9 437 aa16.44■□□□□ 0.22
AGRN-210ENST00000620552 DENND4BO75064 1496 aaPredicted RBP16.44■□□□□ 0.22
AGRN-210ENST00000620552 NKTRP30414 1462 aaKnown RBP16.44■□□□□ 0.22
AGRN-210ENST00000620552 IDI1Q13907 227 aa16.44■□□□□ 0.22
AGRN-210ENST00000620552 ALDH1L2Q3SY69 923 aa16.44■□□□□ 0.22
AGRN-210ENST00000620552 SSH1Q8WYL5 1049 aa16.44■□□□□ 0.22
AGRN-210ENST00000620552 CWC15Q9P013 229 aaKnown RBP16.44■□□□□ 0.22
AGRN-210ENST00000620552 IFNL2Q8IZJ0 200 aa16.43■□□□□ 0.22
AGRN-210ENST00000620552 TMEM266Q2M3C6 531 aa16.43■□□□□ 0.22
AGRN-210ENST00000620552 C8orf76Q96K31 380 aa16.43■□□□□ 0.22
AGRN-210ENST00000620552 CCT2P78371 535 aaKnown RBP16.43■□□□□ 0.22
AGRN-210ENST00000620552 CFAP100Q494V2 611 aa16.43■□□□□ 0.22
AGRN-210ENST00000620552 ITSN2Q9NZM3 1697 aa16.42■□□□□ 0.22
AGRN-210ENST00000620552 FERMT3Q86UX7 667 aa16.42■□□□□ 0.22
AGRN-210ENST00000620552 GOLIM4O00461 696 aa16.42■□□□□ 0.22
AGRN-210ENST00000620552 MYO1BO43795 1136 aa16.42■□□□□ 0.22
AGRN-210ENST00000620552 ABCA10Q8WWZ4 1543 aa16.42■□□□□ 0.22
AGRN-210ENST00000620552 LEKR1Q6ZMV7 388 aa16.42■□□□□ 0.22
AGRN-210ENST00000620552 C8orf37Q96NL8 207 aa16.42■□□□□ 0.22
AGRN-210ENST00000620552 RNF41Q9H4P4 317 aaPredicted RBP16.42■□□□□ 0.22
AGRN-210ENST00000620552 LDHAL6AQ6ZMR3 332 aa16.42■□□□□ 0.22
AGRN-210ENST00000620552 TEX13AQ9BXU3 409 aaPredicted RBP16.42■□□□□ 0.22
AGRN-210ENST00000620552 IQCEQ6IPM2 695 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 TAF4BQ92750 862 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 GOLGA8BA8MQT2 603 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 GOLGA8AA7E2F4 631 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 NBPF6Q5VWK0 638 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 NBPF5PQ86XG9 351 aaPredicted RBP16.41■□□□□ 0.22
AGRN-210ENST00000620552 NBPF4Q96M43 638 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 LARP6Q9BRS8 491 aaKnown RBP16.41■□□□□ 0.22
AGRN-210ENST00000620552 WWC3Q9ULE0 1092 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 ATP6V1AP38606 617 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 MAP3K11Q16584 847 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 RAB34Q9BZG1 259 aa16.41■□□□□ 0.22
AGRN-210ENST00000620552 FILIP1Q7Z7B0 1213 aa16.4■□□□□ 0.22
AGRN-210ENST00000620552 HMGB1P09429 215 aaKnown RBP16.4■□□□□ 0.22
AGRN-210ENST00000620552 TTF1Q15361 905 aaPredicted RBP16.4■□□□□ 0.22
AGRN-210ENST00000620552 TTC21BQ7Z4L5 1316 aa16.4■□□□□ 0.22
AGRN-210ENST00000620552 BAG3O95817 575 aa16.4■□□□□ 0.22
AGRN-210ENST00000620552 ANAPC15P60006 121 aa16.4■□□□□ 0.22
AGRN-210ENST00000620552 BACH2Q9BYV9 841 aa16.4■□□□□ 0.22
AGRN-210ENST00000620552 PTPRCP08575 1304 aa16.4■□□□□ 0.22
AGRN-210ENST00000620552 BAG4O95429 457 aaKnown RBP16.4■□□□□ 0.22
AGRN-210ENST00000620552 UBAP1LF5GYI3 381 aa16.4■□□□□ 0.22
AGRN-210ENST00000620552 ECM2O94769 699 aaPredicted RBP16.4■□□□□ 0.22
AGRN-210ENST00000620552 CACNA2D4Q7Z3S7 1137 aa16.4■□□□□ 0.22
AGRN-210ENST00000620552 ACEP12821 1306 aa16.39■□□□□ 0.22
AGRN-210ENST00000620552 HLA-DOAP06340 250 aa16.39■□□□□ 0.22
AGRN-210ENST00000620552 FKBP15Q5T1M5 1219 aa16.39■□□□□ 0.22
AGRN-210ENST00000620552 DRC1Q96MC2 740 aa16.39■□□□□ 0.22
AGRN-210ENST00000620552 SAMM50Q9Y512 469 aa16.39■□□□□ 0.22
AGRN-210ENST00000620552 CABP5Q9NP86 173 aa16.39■□□□□ 0.21
AGRN-210ENST00000620552 UNC13AQ9UPW8 1703 aa16.39■□□□□ 0.21
AGRN-210ENST00000620552 TSPY2A6NKD2 308 aa16.39■□□□□ 0.21
AGRN-210ENST00000620552 RARSP54136 660 aaKnown RBP16.39■□□□□ 0.21
AGRN-210ENST00000620552 KAT14Q9H8E8 782 aa16.39■□□□□ 0.21
AGRN-210ENST00000620552 CCDC194A0A1B0GVG4 234 aa16.39■□□□□ 0.21
AGRN-210ENST00000620552 FLIIQ13045 1269 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms