RNA–Protein interactions for RNA: ENST00000619300.4

PSPC1-206, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PSPC1, Length 2,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-206ENST00000619300 MAP3K2Q9Y2U5 619 aa23.66■■□□□ 1.38
PSPC1-206ENST00000619300 PNMA6EA0A0J9YXQ4 647 aa23.66■■□□□ 1.38
PSPC1-206ENST00000619300 APBB1O00213 710 aa23.66■■□□□ 1.38
PSPC1-206ENST00000619300 NKX1-1Q15270 411 aaPredicted RBP23.66■■□□□ 1.38
PSPC1-206ENST00000619300 FMNL2Q96PY5 1086 aa23.66■■□□□ 1.38
PSPC1-206ENST00000619300 PARP4Q9UKK3 1724 aaKnown RBP23.66■■□□□ 1.38
PSPC1-206ENST00000619300 SMARCA5O60264 1052 aaPredicted RBP23.65■■□□□ 1.38
PSPC1-206ENST00000619300 ERVV-2B6SEH9 535 aa23.64■■□□□ 1.38
PSPC1-206ENST00000619300 DDX58O95786 925 aaKnown RBP23.64■■□□□ 1.38
PSPC1-206ENST00000619300 DAXXQ9UER7 740 aaPredicted RBP23.64■■□□□ 1.38
PSPC1-206ENST00000619300 ALDH1L1O75891 902 aa23.64■■□□□ 1.37
PSPC1-206ENST00000619300 NBPF7P0C2Y1 421 aaPredicted RBP23.63■■□□□ 1.37
PSPC1-206ENST00000619300 BTG4Q9NY30 223 aa23.63■■□□□ 1.37
PSPC1-206ENST00000619300 MFAP1P55081 439 aaKnown RBP23.62■■□□□ 1.37
PSPC1-206ENST00000619300 BCL11AQ9H165 835 aa23.62■■□□□ 1.37
PSPC1-206ENST00000619300 DDX54Q8TDD1 881 aaKnown RBP23.62■■□□□ 1.37
PSPC1-206ENST00000619300 EXOC6BQ9Y2D4 811 aa23.62■■□□□ 1.37
PSPC1-206ENST00000619300 USP16Q9Y5T5 823 aa23.62■■□□□ 1.37
PSPC1-206ENST00000619300 TTC22Q5TAA0 569 aa23.61■■□□□ 1.37
PSPC1-206ENST00000619300 OTUD7AQ8TE49 926 aaPredicted RBP23.61■■□□□ 1.37
PSPC1-206ENST00000619300 SSH3Q8TE77 659 aa23.61■■□□□ 1.37
PSPC1-206ENST00000619300 ROBO1Q9Y6N7 1651 aa23.61■■□□□ 1.37
PSPC1-206ENST00000619300 GSPT1P15170 499 aaKnown RBP23.6■■□□□ 1.37
PSPC1-206ENST00000619300 AIMP1Q12904 312 aaKnown RBP23.6■■□□□ 1.37
PSPC1-206ENST00000619300 C22orf23Q9BZE7 217 aa23.6■■□□□ 1.37
PSPC1-206ENST00000619300 LTBP4Q8N2S1 1624 aa23.6■■□□□ 1.37
PSPC1-206ENST00000619300 SLC4A3P48751 1232 aa23.59■■□□□ 1.37
PSPC1-206ENST00000619300 PPP1R42Q7Z4L9 355 aa23.59■■□□□ 1.37
PSPC1-206ENST00000619300 LRRCC1Q9C099 1032 aa23.59■■□□□ 1.37
PSPC1-206ENST00000619300 AHDC1Q5TGY3 1603 aaPredicted RBP23.59■■□□□ 1.37
PSPC1-206ENST00000619300 MYL6BP14649 208 aa23.59■■□□□ 1.37
PSPC1-206ENST00000619300 POLA2Q14181 598 aa23.59■■□□□ 1.37
PSPC1-206ENST00000619300 LINS1Q8NG48 757 aa23.59■■□□□ 1.37
PSPC1-206ENST00000619300 USP35Q9P2H5 1018 aa23.59■■□□□ 1.37
PSPC1-206ENST00000619300 IBTKQ9P2D0 1353 aaPredicted RBP23.58■■□□□ 1.37
PSPC1-206ENST00000619300 TBC1D9Q6ZT07 1266 aa23.57■■□□□ 1.36
PSPC1-206ENST00000619300 C9orf78Q9NZ63 289 aaPredicted RBP23.57■■□□□ 1.36
PSPC1-206ENST00000619300 HDAC5Q9UQL6 1122 aa23.57■■□□□ 1.36
PSPC1-206ENST00000619300 C5P01031 1676 aa23.57■■□□□ 1.36
PSPC1-206ENST00000619300 COPS6Q7L5N1 327 aa23.57■■□□□ 1.36
PSPC1-206ENST00000619300 RIC3Q7Z5B4 369 aa23.57■■□□□ 1.36
PSPC1-206ENST00000619300 XAGE3Q8WTP9 111 aa23.57■■□□□ 1.36
PSPC1-206ENST00000619300 CDC45O75419 566 aa23.56■■□□□ 1.36
PSPC1-206ENST00000619300 CWF19L2Q2TBE0 894 aaKnown RBP23.56■■□□□ 1.36
PSPC1-206ENST00000619300 LRP10Q7Z4F1 713 aa23.56■■□□□ 1.36
PSPC1-206ENST00000619300 OSBPL3Q9H4L5 887 aa23.56■■□□□ 1.36
PSPC1-206ENST00000619300 SRGAP3O43295 1099 aa23.55■■□□□ 1.36
PSPC1-206ENST00000619300 RAB11FIP3O75154 756 aa23.54■■□□□ 1.36
PSPC1-206ENST00000619300 PDE1AP54750 535 aa23.54■■□□□ 1.36
PSPC1-206ENST00000619300 BECN1Q14457 450 aa23.54■■□□□ 1.36
PSPC1-206ENST00000619300 ANKRD13DQ6ZTN6 518 aa23.53■■□□□ 1.36
PSPC1-206ENST00000619300 UTYO14607 1347 aa23.53■■□□□ 1.36
PSPC1-206ENST00000619300 SURF6O75683 361 aaKnown RBP23.52■■□□□ 1.36
PSPC1-206ENST00000619300 NEXNQ0ZGT2 675 aa23.52■■□□□ 1.36
PSPC1-206ENST00000619300 MTX1Q13505 466 aa23.52■■□□□ 1.36
PSPC1-206ENST00000619300 COL14A1Q05707 1796 aaKnown RBP23.52■■□□□ 1.36
PSPC1-206ENST00000619300 COL22A1Q8NFW1 1626 aaPredicted RBP23.52■■□□□ 1.36
PSPC1-206ENST00000619300 GRM8O00222 908 aa23.52■■□□□ 1.36
PSPC1-206ENST00000619300 IGKV5-2P06315 115 aa23.52■■□□□ 1.36
PSPC1-206ENST00000619300 METTL22Q9BUU2 404 aaPredicted RBP23.52■■□□□ 1.36
PSPC1-206ENST00000619300 EIF5BO60841 1220 aaKnown RBP23.51■■□□□ 1.35
PSPC1-206ENST00000619300 SDSP20132 328 aa23.51■■□□□ 1.35
PSPC1-206ENST00000619300 RBM25P49756 843 aaKnown RBP23.51■■□□□ 1.35
PSPC1-206ENST00000619300 ERBB4Q15303 1308 aa23.51■■□□□ 1.35
PSPC1-206ENST00000619300 SALL3Q9BXA9 1300 aa23.51■■□□□ 1.35
PSPC1-206ENST00000619300 PIP4K2AP48426 406 aaPredicted RBP23.5■■□□□ 1.35
PSPC1-206ENST00000619300 SHANK3Q9BYB0 1731 aa23.5■■□□□ 1.35
PSPC1-206ENST00000619300 NEURL1BA8MQ27 555 aa23.49■■□□□ 1.35
PSPC1-206ENST00000619300 HSP90AB4PQ58FF6 505 aa23.49■■□□□ 1.35
PSPC1-206ENST00000619300 TMOD3Q9NYL9 352 aa23.49■■□□□ 1.35
PSPC1-206ENST00000619300 GLI3P10071 1580 aa23.48■■□□□ 1.35
PSPC1-206ENST00000619300 MX1P20591 662 aa23.48■■□□□ 1.35
PSPC1-206ENST00000619300 PTCD1O75127 700 aaKnown RBP23.47■■□□□ 1.35
PSPC1-206ENST00000619300 MYD88Q99836 296 aa23.47■■□□□ 1.35
PSPC1-206ENST00000619300 STAP2Q9UGK3 403 aa23.47■■□□□ 1.35
PSPC1-206ENST00000619300 DISP2A7MBM2 1401 aa23.47■■□□□ 1.35
PSPC1-206ENST00000619300 GCKRQ14397 625 aa23.47■■□□□ 1.35
PSPC1-206ENST00000619300 RHPN1Q8TCX5 695 aa23.47■■□□□ 1.35
PSPC1-206ENST00000619300 KIF1BPQ96EK5 621 aa23.47■■□□□ 1.35
PSPC1-206ENST00000619300 KCPQ6ZWJ8 1503 aa23.46■■□□□ 1.35
PSPC1-206ENST00000619300 NBPF26B4DH59 902 aa23.46■■□□□ 1.35
PSPC1-206ENST00000619300 NBPF14Q5TI25 921 aa23.46■■□□□ 1.35
PSPC1-206ENST00000619300 NBPF10Q6P3W6 841 aaKnown RBP23.46■■□□□ 1.35
PSPC1-206ENST00000619300 NBPF15Q8N660 670 aa23.46■■□□□ 1.35
PSPC1-206ENST00000619300 SUCLG2Q96I99 432 aa23.46■■□□□ 1.35
PSPC1-206ENST00000619300 TNS2Q63HR2 1409 aa23.46■■□□□ 1.35
PSPC1-206ENST00000619300 COL16A1Q07092 1604 aaPredicted RBP23.45■■□□□ 1.34
PSPC1-206ENST00000619300 CASC1Q6TDU7 716 aa23.45■■□□□ 1.34
PSPC1-206ENST00000619300 PLBD2Q8NHP8 589 aa23.45■■□□□ 1.34
PSPC1-206ENST00000619300 KAZALD1Q96I82 304 aa23.45■■□□□ 1.34
PSPC1-206ENST00000619300 IL1RAPL2Q9NP60 686 aa23.45■■□□□ 1.34
PSPC1-206ENST00000619300 UBR2Q8IWV8 1755 aa23.44■■□□□ 1.34
PSPC1-206ENST00000619300 TOM1O60784 492 aa23.43■■□□□ 1.34
PSPC1-206ENST00000619300 TBC1D2Q9BYX2 928 aa23.43■■□□□ 1.34
PSPC1-206ENST00000619300 EXOC5O00471 708 aa23.43■■□□□ 1.34
PSPC1-206ENST00000619300 ADAMTS2O95450 1211 aa23.43■■□□□ 1.34
PSPC1-206ENST00000619300 PIGBQ92521 554 aa23.43■■□□□ 1.34
PSPC1-206ENST00000619300 BICC1Q9H694 974 aaKnown RBP23.43■■□□□ 1.34
PSPC1-206ENST00000619300 LAMB4A4D0S4 1761 aa23.43■■□□□ 1.34
PSPC1-206ENST00000619300 PAPPAQ13219 1627 aa23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms