RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 FOXD4L4Q8WXT5 416 aaPredicted RBP13.12□□□□□ -0.31
PCDHGC3-202ENST00000611950 RBM25P49756 843 aaKnown RBP13.11□□□□□ -0.31
PCDHGC3-202ENST00000611950 CHAMP1Q96JM3 812 aa13.11□□□□□ -0.31
PCDHGC3-202ENST00000611950 TOPAZ1Q8N9V7 1692 aa13.11□□□□□ -0.31
PCDHGC3-202ENST00000611950 GAS2L3Q86XJ1 694 aa13.11□□□□□ -0.31
PCDHGC3-202ENST00000611950 PEAK1Q9H792 1746 aa13.1□□□□□ -0.31
PCDHGC3-202ENST00000611950 HSP90AB2PQ58FF8 381 aa13.1□□□□□ -0.31
PCDHGC3-202ENST00000611950 F6X3S4 739 aa13.1□□□□□ -0.31
PCDHGC3-202ENST00000611950 FOXO3O43524 673 aa13.1□□□□□ -0.31
PCDHGC3-202ENST00000611950 FNBP4Q8N3X1 1017 aaPredicted RBP13.1□□□□□ -0.31
PCDHGC3-202ENST00000611950 GCC1Q96CN9 775 aa13.1□□□□□ -0.31
PCDHGC3-202ENST00000611950 CARD10Q9BWT7 1032 aa13.1□□□□□ -0.31
PCDHGC3-202ENST00000611950 USP6P35125 1406 aa13.1□□□□□ -0.31
PCDHGC3-202ENST00000611950 NPHP3Q7Z494 1330 aa13.09□□□□□ -0.31
PCDHGC3-202ENST00000611950 PLEKHG3A1L390 1219 aa13.09□□□□□ -0.31
PCDHGC3-202ENST00000611950 MEIS3Q99687 375 aa13.09□□□□□ -0.31
PCDHGC3-202ENST00000611950 NOL8Q76FK4 1167 aaKnown RBP13.08□□□□□ -0.31
PCDHGC3-202ENST00000611950 GRPEL1Q9HAV7 217 aa13.08□□□□□ -0.31
PCDHGC3-202ENST00000611950 FSD2A1L4K1 749 aa13.08□□□□□ -0.32
PCDHGC3-202ENST00000611950 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
PCDHGC3-202ENST00000611950 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC3-202ENST00000611950 SETQ01105 290 aaPredicted RBP13.08□□□□□ -0.32
PCDHGC3-202ENST00000611950 PKP1Q13835 747 aa13.08□□□□□ -0.32
PCDHGC3-202ENST00000611950 TAF3Q5VWG9 929 aa13.08□□□□□ -0.32
PCDHGC3-202ENST00000611950 PLEKHM2Q8IWE5 1019 aa13.08□□□□□ -0.32
PCDHGC3-202ENST00000611950 ATRNO75882 1429 aa13.08□□□□□ -0.32
PCDHGC3-202ENST00000611950 API5Q9BZZ5 524 aaKnown RBP13.08□□□□□ -0.32
PCDHGC3-202ENST00000611950 CDC45O75419 566 aa13.07□□□□□ -0.32
PCDHGC3-202ENST00000611950 DNAJC2Q99543 621 aaKnown RBP13.07□□□□□ -0.32
PCDHGC3-202ENST00000611950 ZSCAN20P17040 1043 aaPredicted RBP13.07□□□□□ -0.32
PCDHGC3-202ENST00000611950 EGFL6Q8IUX8 553 aa13.07□□□□□ -0.32
PCDHGC3-202ENST00000611950 SSH2Q76I76 1423 aa13.06□□□□□ -0.32
PCDHGC3-202ENST00000611950 RGPD1P0DJD0 1748 aa13.06□□□□□ -0.32
PCDHGC3-202ENST00000611950 ZNF526Q8TF50 670 aaPredicted RBP13.06□□□□□ -0.32
PCDHGC3-202ENST00000611950 COL22A1Q8NFW1 1626 aaPredicted RBP13.06□□□□□ -0.32
PCDHGC3-202ENST00000611950 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
PCDHGC3-202ENST00000611950 CHL1O00533 1208 aa13.06□□□□□ -0.32
PCDHGC3-202ENST00000611950 NUTM2GQ5VZR2 741 aa13.06□□□□□ -0.32
PCDHGC3-202ENST00000611950 GBP4Q96PP9 640 aa13.06□□□□□ -0.32
PCDHGC3-202ENST00000611950 MARF1Q9Y4F3 1742 aaKnown RBP13.06□□□□□ -0.32
PCDHGC3-202ENST00000611950 SLC4A2P04920 1241 aa13.05□□□□□ -0.32
PCDHGC3-202ENST00000611950 SLC20A2Q08357 652 aa13.05□□□□□ -0.32
PCDHGC3-202ENST00000611950 G2E3Q7L622 706 aa13.05□□□□□ -0.32
PCDHGC3-202ENST00000611950 BCL9LQ86UU0 1499 aa13.05□□□□□ -0.32
PCDHGC3-202ENST00000611950 DDIT3P35638 169 aa13.05□□□□□ -0.32
PCDHGC3-202ENST00000611950 RAB3GAP1Q15042 981 aa13.05□□□□□ -0.32
PCDHGC3-202ENST00000611950 FOXD4L6Q3SYB3 417 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-202ENST00000611950 FOXD4L3Q6VB84 417 aaPredicted RBP13.05□□□□□ -0.32
PCDHGC3-202ENST00000611950 SNX21Q969T3 373 aa13.05□□□□□ -0.32
PCDHGC3-202ENST00000611950 MCTP1Q6DN14 999 aa13.04□□□□□ -0.32
PCDHGC3-202ENST00000611950 GJD4Q96KN9 370 aaPredicted RBP13.04□□□□□ -0.32
PCDHGC3-202ENST00000611950 MAP3K19Q56UN5 1328 aa13.04□□□□□ -0.32
PCDHGC3-202ENST00000611950 MRE11P49959 708 aa13.04□□□□□ -0.32
PCDHGC3-202ENST00000611950 ZGPATQ8N5A5 531 aaKnown RBP13.04□□□□□ -0.32
PCDHGC3-202ENST00000611950 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
PCDHGC3-202ENST00000611950 SH3BP1Q9Y3L3 701 aa13.04□□□□□ -0.32
PCDHGC3-202ENST00000611950 DDX49Q9Y6V7 483 aaKnown RBP13.04□□□□□ -0.32
PCDHGC3-202ENST00000611950 ERBB4Q15303 1308 aa13.04□□□□□ -0.32
PCDHGC3-202ENST00000611950 SDSP20132 328 aa13.03□□□□□ -0.32
PCDHGC3-202ENST00000611950 ANAPC15P60006 121 aa13.03□□□□□ -0.32
PCDHGC3-202ENST00000611950 INTS3Q68E01 1043 aaKnown RBP13.03□□□□□ -0.32
PCDHGC3-202ENST00000611950 PXDNQ92626 1479 aa13.03□□□□□ -0.32
PCDHGC3-202ENST00000611950 CRB1P82279 1406 aa13.03□□□□□ -0.32
PCDHGC3-202ENST00000611950 TTC22Q5TAA0 569 aa13.03□□□□□ -0.32
PCDHGC3-202ENST00000611950 ATP10DQ9P241 1426 aa13.03□□□□□ -0.32
PCDHGC3-202ENST00000611950 CEP85Q6P2H3 762 aa13.03□□□□□ -0.32
PCDHGC3-202ENST00000611950 CWC22Q9HCG8 908 aaKnown RBP13.03□□□□□ -0.32
PCDHGC3-202ENST00000611950 KIF24Q5T7B8 1368 aa13.02□□□□□ -0.32
PCDHGC3-202ENST00000611950 LETM1O95202 739 aaPredicted RBP13.02□□□□□ -0.33
PCDHGC3-202ENST00000611950 CCDC125Q86Z20 511 aa13.02□□□□□ -0.33
PCDHGC3-202ENST00000611950 GPATCH11Q8N954 259 aa13.02□□□□□ -0.33
PCDHGC3-202ENST00000611950 LTV1Q96GA3 475 aaPredicted RBP13.02□□□□□ -0.33
PCDHGC3-202ENST00000611950 GTPBP4Q9BZE4 634 aaKnown RBP13.02□□□□□ -0.33
PCDHGC3-202ENST00000611950 DCTPP1Q9H773 170 aa13.02□□□□□ -0.33
PCDHGC3-202ENST00000611950 KIAA0232Q92628 1395 aa13.02□□□□□ -0.33
PCDHGC3-202ENST00000611950 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
PCDHGC3-202ENST00000611950 TRIM44Q96DX7 344 aaPredicted RBP13.01□□□□□ -0.33
PCDHGC3-202ENST00000611950 DTNBO60941 627 aa13.01□□□□□ -0.33
PCDHGC3-202ENST00000611950 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
PCDHGC3-202ENST00000611950 RGPD8O14715 1765 aaPredicted RBP13.01□□□□□ -0.33
PCDHGC3-202ENST00000611950 CC2D2BQ6DHV5 1058 aa13□□□□□ -0.33
PCDHGC3-202ENST00000611950 CAVIN1Q6NZI2 390 aaKnown RBP13□□□□□ -0.33
PCDHGC3-202ENST00000611950 UNC5CLQ8IV45 518 aa13□□□□□ -0.33
PCDHGC3-202ENST00000611950 CHMP4CQ96CF2 233 aa13□□□□□ -0.33
PCDHGC3-202ENST00000611950 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
PCDHGC3-202ENST00000611950 IRF6O14896 467 aa13□□□□□ -0.33
PCDHGC3-202ENST00000611950 BAG4O95429 457 aaKnown RBP13□□□□□ -0.33
PCDHGC3-202ENST00000611950 FMN2Q9NZ56 1722 aa13□□□□□ -0.33
PCDHGC3-202ENST00000611950 TTC21AQ8NDW8 1320 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 PRR29P0C7W0 189 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 LMOD2Q6P5Q4 547 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 ANKRD44Q8N8A2 993 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 YY1AP1Q9H869 796 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 GEMIN8Q9NWZ8 242 aaKnown RBP12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 SBNO1A3KN83 1393 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 FLT4P35916 1363 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 NBPF20Q3BBV1 942 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 DEFB132Q7Z7B7 95 aa12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 NGDNQ8NEJ9 315 aaKnown RBP12.99□□□□□ -0.33
PCDHGC3-202ENST00000611950 USP26Q9BXU7 913 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms