RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PSME1Q06323 249 aa10.9□□□□□ -0.66
NCBP3-204ENST00000574911 RHPN1Q8TCX5 695 aa10.9□□□□□ -0.66
NCBP3-204ENST00000574911 DNAAF4Q8WXU2 420 aa10.9□□□□□ -0.66
NCBP3-204ENST00000574911 ANO2Q9NQ90 1003 aa10.9□□□□□ -0.66
NCBP3-204ENST00000574911 NUTM1Q86Y26 1132 aa10.9□□□□□ -0.66
NCBP3-204ENST00000574911 PI4K2BQ8TCG2 481 aa10.9□□□□□ -0.66
NCBP3-204ENST00000574911 RGPD2P0DJD1 1756 aa10.9□□□□□ -0.67
NCBP3-204ENST00000574911 NBPF7P0C2Y1 421 aaPredicted RBP10.89□□□□□ -0.67
NCBP3-204ENST00000574911 PLEKHO1Q53GL0 409 aaPredicted RBP10.89□□□□□ -0.67
NCBP3-204ENST00000574911 KIF1BPQ96EK5 621 aa10.89□□□□□ -0.67
NCBP3-204ENST00000574911 ZNF142P52746 1687 aaPredicted RBP10.89□□□□□ -0.67
NCBP3-204ENST00000574911 ADCY9O60503 1353 aa10.89□□□□□ -0.67
NCBP3-204ENST00000574911 PI4KAP2A4QPH2 592 aa10.89□□□□□ -0.67
NCBP3-204ENST00000574911 BTBD11A6QL63 1104 aa10.89□□□□□ -0.67
NCBP3-204ENST00000574911 SRGAP3O43295 1099 aa10.89□□□□□ -0.67
NCBP3-204ENST00000574911 ESCO1Q5FWF5 840 aa10.89□□□□□ -0.67
NCBP3-204ENST00000574911 ZNF530Q6P9A1 599 aaPredicted RBP10.89□□□□□ -0.67
NCBP3-204ENST00000574911 PI4KAP1Q8N8J0 262 aa10.89□□□□□ -0.67
NCBP3-204ENST00000574911 INTS4Q96HW7 963 aaKnown RBP10.89□□□□□ -0.67
NCBP3-204ENST00000574911 SLIT3O75094 1523 aa10.89□□□□□ -0.67
NCBP3-204ENST00000574911 OVOS2A0A0G2JMS6 1433 aa10.88□□□□□ -0.67
NCBP3-204ENST00000574911 AMOTQ4VCS5 1084 aa10.88□□□□□ -0.67
NCBP3-204ENST00000574911 LRRC59Q96AG4 307 aaKnown RBP10.88□□□□□ -0.67
NCBP3-204ENST00000574911 RBM33Q96EV2 1170 aaKnown RBP10.88□□□□□ -0.67
NCBP3-204ENST00000574911 IL25Q9H293 177 aa10.88□□□□□ -0.67
NCBP3-204ENST00000574911 USP42Q9H9J4 1324 aaKnown RBP10.88□□□□□ -0.67
NCBP3-204ENST00000574911 RNMTO43148 476 aaKnown RBP10.88□□□□□ -0.67
NCBP3-204ENST00000574911 PRPF40AO75400 957 aaKnown RBP10.88□□□□□ -0.67
NCBP3-204ENST00000574911 BRD1O95696 1058 aa10.88□□□□□ -0.67
NCBP3-204ENST00000574911 HSPA4P34932 840 aa10.88□□□□□ -0.67
NCBP3-204ENST00000574911 TEFQ10587 303 aa10.88□□□□□ -0.67
NCBP3-204ENST00000574911 ZSCAN23Q3MJ62 389 aa10.88□□□□□ -0.67
NCBP3-204ENST00000574911 GPT2Q8TD30 523 aa10.88□□□□□ -0.67
NCBP3-204ENST00000574911 PPP1R9BQ96SB3 815 aa10.88□□□□□ -0.67
NCBP3-204ENST00000574911 CAVIN1Q6NZI2 390 aaKnown RBP10.87□□□□□ -0.67
NCBP3-204ENST00000574911 MPRIPQ6WCQ1 1025 aa10.87□□□□□ -0.67
NCBP3-204ENST00000574911 CRYBG1Q9Y4K1 1723 aa10.87□□□□□ -0.67
NCBP3-204ENST00000574911 PXDNQ92626 1479 aa10.87□□□□□ -0.67
NCBP3-204ENST00000574911 ZBTB7CA1YPR0 619 aa10.87□□□□□ -0.67
NCBP3-204ENST00000574911 NASPP49321 788 aaPredicted RBP10.87□□□□□ -0.67
NCBP3-204ENST00000574911 CCDC173Q0VFZ6 552 aa10.87□□□□□ -0.67
NCBP3-204ENST00000574911 MTX1Q13505 466 aa10.87□□□□□ -0.67
NCBP3-204ENST00000574911 ARHGEF25Q86VW2 580 aa10.87□□□□□ -0.67
NCBP3-204ENST00000574911 HEG1Q9ULI3 1381 aa10.87□□□□□ -0.67
NCBP3-204ENST00000574911 CAMTA1Q9Y6Y1 1673 aa10.87□□□□□ -0.67
NCBP3-204ENST00000574911 SGSM2O43147 1006 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 NCLP19338 710 aaKnown RBP10.86□□□□□ -0.67
NCBP3-204ENST00000574911 HSP90AB4PQ58FF6 505 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 ESPNB1AK53 854 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 MAP4K4O95819 1239 aaPredicted RBP10.86□□□□□ -0.67
NCBP3-204ENST00000574911 GCP02774 474 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 ANXA1P04083 346 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 DBF4Q9UBU7 674 aaPredicted RBP10.86□□□□□ -0.67
NCBP3-204ENST00000574911 ERBB4Q15303 1308 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 RAD50Q92878 1312 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 ALDH1L1O75891 902 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 PLEKHG5O94827 1062 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 CNTROBQ8N137 903 aa10.86□□□□□ -0.67
NCBP3-204ENST00000574911 LMTK3Q96Q04 1460 aa10.85□□□□□ -0.67
NCBP3-204ENST00000574911 TTC41PQ6P2S7 1318 aa10.85□□□□□ -0.67
NCBP3-204ENST00000574911 GIGYF1O75420 1035 aaPredicted RBP10.85□□□□□ -0.67
NCBP3-204ENST00000574911 TRIM44Q96DX7 344 aaPredicted RBP10.85□□□□□ -0.67
NCBP3-204ENST00000574911 CHAMP1Q96JM3 812 aa10.85□□□□□ -0.67
NCBP3-204ENST00000574911 LSG1Q9H089 658 aaKnown RBP10.85□□□□□ -0.67
NCBP3-204ENST00000574911 C1orf141Q5JVX7 400 aa10.85□□□□□ -0.67
NCBP3-204ENST00000574911 ANKRD24Q8TF21 1146 aa10.85□□□□□ -0.67
NCBP3-204ENST00000574911 SIPA1L3O60292 1781 aaPredicted RBP10.84□□□□□ -0.67
NCBP3-204ENST00000574911 ADAMTS7Q9UKP4 1686 aa10.84□□□□□ -0.67
NCBP3-204ENST00000574911 KSR2Q6VAB6 950 aa10.84□□□□□ -0.67
NCBP3-204ENST00000574911 ORAI2Q96SN7 254 aa10.84□□□□□ -0.67
NCBP3-204ENST00000574911 UPF3BQ9BZI7 483 aaKnown RBP10.84□□□□□ -0.67
NCBP3-204ENST00000574911 RBM27Q9P2N5 1060 aaKnown RBP10.84□□□□□ -0.67
NCBP3-204ENST00000574911 MAP3K2Q9Y2U5 619 aa10.84□□□□□ -0.67
NCBP3-204ENST00000574911 PROSER3Q2NL68 480 aa10.84□□□□□ -0.67
NCBP3-204ENST00000574911 SNX14Q9Y5W7 946 aa10.84□□□□□ -0.67
NCBP3-204ENST00000574911 TRPM3Q9HCF6 1732 aaPredicted RBP10.83□□□□□ -0.67
NCBP3-204ENST00000574911 GLRX3O76003 335 aaKnown RBP10.83□□□□□ -0.68
NCBP3-204ENST00000574911 FOXD4L5Q5VV16 416 aaPredicted RBP10.83□□□□□ -0.68
NCBP3-204ENST00000574911 NOL8Q76FK4 1167 aaKnown RBP10.83□□□□□ -0.68
NCBP3-204ENST00000574911 FOXD4L4Q8WXT5 416 aaPredicted RBP10.83□□□□□ -0.68
NCBP3-204ENST00000574911 TTC14Q96N46 770 aa10.83□□□□□ -0.68
NCBP3-204ENST00000574911 RBSNQ9H1K0 784 aa10.83□□□□□ -0.68
NCBP3-204ENST00000574911 NSFL1CQ9UNZ2 370 aaKnown RBP10.83□□□□□ -0.68
NCBP3-204ENST00000574911 MBD3O95983 291 aa10.83□□□□□ -0.68
NCBP3-204ENST00000574911 TMEM63CQ9P1W3 806 aa10.83□□□□□ -0.68
NCBP3-204ENST00000574911 NPHP4O75161 1426 aaPredicted RBP10.83□□□□□ -0.68
NCBP3-204ENST00000574911 PRIM1P49642 420 aaKnown RBP10.82□□□□□ -0.68
NCBP3-204ENST00000574911 HDAC5Q9UQL6 1122 aa10.82□□□□□ -0.68
NCBP3-204ENST00000574911 SETD1BQ9UPS6 1966 aaKnown RBP10.82□□□□□ -0.68
NCBP3-204ENST00000574911 UTYO14607 1347 aa10.82□□□□□ -0.68
NCBP3-204ENST00000574911 PRAMEF22A3QJZ6 481 aa10.82□□□□□ -0.68
NCBP3-204ENST00000574911 OS9Q13438 667 aaPredicted RBP10.82□□□□□ -0.68
NCBP3-204ENST00000574911 LRSAM1Q6UWE0 723 aa10.82□□□□□ -0.68
NCBP3-204ENST00000574911 ERC1Q8IUD2 1116 aa10.82□□□□□ -0.68
NCBP3-204ENST00000574911 CLASRPQ8N2M8 674 aaKnown RBP10.82□□□□□ -0.68
NCBP3-204ENST00000574911 ANP32BQ92688 251 aaKnown RBP10.82□□□□□ -0.68
NCBP3-204ENST00000574911 HYPKQ9NX55 129 aa10.82□□□□□ -0.68
NCBP3-204ENST00000574911 C9orf78Q9NZ63 289 aaPredicted RBP10.82□□□□□ -0.68
NCBP3-204ENST00000574911 MST1RQ04912 1400 aa10.81□□□□□ -0.68
NCBP3-204ENST00000574911 XPCQ01831 940 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms