RNA–Protein interactions for RNA: ENST00000562624.2

LINC02249-202, Transcript of long intergenic non-protein coding RNA 2249, humanhuman

TSL 1 (best) BASIC

Gene LINC02249, Length 4,260 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02249-202ENST00000562624 CDC42BPGQ6DT37 1551 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 PRAMEF22A3QJZ6 481 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 VPS72Q15906 364 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 PIGBQ92521 554 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 R3HCC1Q9Y3T6 440 aaKnown RBP8.32□□□□□ -1.08
LINC02249-202ENST00000562624 KIF16BQ96L93 1317 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 AATKQ6ZMQ8 1374 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 VPS37DQ86XT2 251 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 SRCIN1Q9C0H9 1055 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 IGSF1Q8N6C5 1336 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 DLC1Q96QB1 1528 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 LOC102724428A0A0B4J2F2 783 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 SIK1P57059 783 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 DZIP3Q86Y13 1208 aaKnown RBP8.32□□□□□ -1.08
LINC02249-202ENST00000562624 ZNF622Q969S3 477 aaKnown RBP eCLIP8.32□□□□□ -1.08
LINC02249-202ENST00000562624 NEUROD6Q96NK8 337 aa8.32□□□□□ -1.08
LINC02249-202ENST00000562624 DCCP43146 1447 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 TRAPPC3LQ5T215 181 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 KIAA1211Q6ZU35 1233 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 NIP7Q9Y221 180 aaKnown RBP eCLIP8.31□□□□□ -1.08
LINC02249-202ENST00000562624 FLIIQ13045 1269 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 NBPF5PQ86XG9 351 aaPredicted RBP8.31□□□□□ -1.08
LINC02249-202ENST00000562624 MARCH10Q8NA82 808 aaPredicted RBP8.31□□□□□ -1.08
LINC02249-202ENST00000562624 RWDD1Q9H446 243 aaPredicted RBP8.31□□□□□ -1.08
LINC02249-202ENST00000562624 PHAXQ9H814 394 aaKnown RBP8.31□□□□□ -1.08
LINC02249-202ENST00000562624 ZNF652Q9Y2D9 606 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 SPATA31A1Q5TZJ5 1347 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 NCOA3Q9Y6Q9 1424 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 ANKRD13DQ6ZTN6 518 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 TRIM35Q9UPQ4 493 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 ATF5Q9Y2D1 282 aaPredicted RBP8.31□□□□□ -1.08
LINC02249-202ENST00000562624 MAP3K2Q9Y2U5 619 aa8.31□□□□□ -1.08
LINC02249-202ENST00000562624 A0A087WZG4 1122 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 TRAK2O60296 914 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 HMMRO75330 724 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 RBM10P98175 930 aaKnown RBP8.3□□□□□ -1.08
LINC02249-202ENST00000562624 CASC1Q6TDU7 716 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 SYAP1Q96A49 352 aaPredicted RBP8.3□□□□□ -1.08
LINC02249-202ENST00000562624 TEX13AQ9BXU3 409 aaPredicted RBP8.3□□□□□ -1.08
LINC02249-202ENST00000562624 NPC1L1Q9UHC9 1359 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 POTEAQ6S8J7 498 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 UBE3BQ7Z3V4 1068 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 HDAC5Q9UQL6 1122 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 DDX49Q9Y6V7 483 aaKnown RBP8.3□□□□□ -1.08
LINC02249-202ENST00000562624 CLCN1P35523 988 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 SETDB2Q96T68 719 aa8.3□□□□□ -1.08
LINC02249-202ENST00000562624 ANKRD45Q5TZF3 282 aa8.29□□□□□ -1.08
LINC02249-202ENST00000562624 MFAP1P55081 439 aaKnown RBP8.29□□□□□ -1.08
LINC02249-202ENST00000562624 CNNM1Q9NRU3 951 aa8.29□□□□□ -1.08
LINC02249-202ENST00000562624 CRB1P82279 1406 aa8.29□□□□□ -1.08
LINC02249-202ENST00000562624 SPATA31A5Q5VU36 1347 aa8.29□□□□□ -1.08
LINC02249-202ENST00000562624 SPATA31A7Q8IWB4 1347 aa8.29□□□□□ -1.08
LINC02249-202ENST00000562624 MPHOSPH8Q99549 860 aa8.29□□□□□ -1.08
LINC02249-202ENST00000562624 THRAP3Q9Y2W1 955 aaKnown RBP8.29□□□□□ -1.08
LINC02249-202ENST00000562624 TRIM6-TRIM34B2RNG4 842 aa8.29□□□□□ -1.08
LINC02249-202ENST00000562624 SURF6O75683 361 aaKnown RBP8.29□□□□□ -1.08
LINC02249-202ENST00000562624 ATF7IPQ6VMQ6 1270 aa8.29□□□□□ -1.08
LINC02249-202ENST00000562624 ERVV-2B6SEH9 535 aa8.28□□□□□ -1.08
LINC02249-202ENST00000562624 ZBTB7AO95365 584 aa8.28□□□□□ -1.08
LINC02249-202ENST00000562624 CCDC173Q0VFZ6 552 aa8.28□□□□□ -1.08
LINC02249-202ENST00000562624 G3BP1Q13283 466 aaKnown RBP eCLIP8.28□□□□□ -1.08
LINC02249-202ENST00000562624 HYPKQ9NX55 129 aa8.28□□□□□ -1.08
LINC02249-202ENST00000562624 CWF19L2Q2TBE0 894 aaKnown RBP8.28□□□□□ -1.08
LINC02249-202ENST00000562624 DNAAF4Q8WXU2 420 aa8.28□□□□□ -1.08
LINC02249-202ENST00000562624 DDX19BQ9UMR2 479 aa8.28□□□□□ -1.08
LINC02249-202ENST00000562624 RARSP54136 660 aaKnown RBP8.28□□□□□ -1.08
LINC02249-202ENST00000562624 G2E3Q7L622 706 aa8.28□□□□□ -1.08
LINC02249-202ENST00000562624 GRPEL1Q9HAV7 217 aa8.28□□□□□ -1.08
LINC02249-202ENST00000562624 USP19O94966 1318 aa8.27□□□□□ -1.08
LINC02249-202ENST00000562624 NASPP49321 788 aaPredicted RBP8.27□□□□□ -1.09
LINC02249-202ENST00000562624 CCDC57Q2TAC2 916 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 TMEM57Q8N5G2 664 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 ZBTB1Q9Y2K1 713 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 SSH2Q76I76 1423 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 USP31Q70CQ4 1352 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 HTATSF1O43719 755 aaKnown RBP8.27□□□□□ -1.09
LINC02249-202ENST00000562624 POLD1P28340 1107 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 C20orf194Q5TEA3 1177 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 TAF3Q5VWG9 929 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.27□□□□□ -1.09
LINC02249-202ENST00000562624 CCDC87Q9NVE4 849 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 TNNQ9UQP3 1299 aa8.27□□□□□ -1.09
LINC02249-202ENST00000562624 SRGAP3O43295 1099 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 NRDCO43847 1150 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 R3HDM1Q15032 1099 aaKnown RBP8.26□□□□□ -1.09
LINC02249-202ENST00000562624 NUTM1Q86Y26 1132 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 FAM89AQ96GI7 184 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.26□□□□□ -1.09
LINC02249-202ENST00000562624 RTL1A6NKG5 1358 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 GOLGA6L6A8MZA4 724 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 CRKLP46109 303 aaKnown RBP8.26□□□□□ -1.09
LINC02249-202ENST00000562624 CCDC66A2RUB6 948 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 TXNRD1Q16881 649 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 PTF1AQ7RTS3 328 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 RPGRQ92834 1020 aaKnown RBP8.26□□□□□ -1.09
LINC02249-202ENST00000562624 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.26□□□□□ -1.09
LINC02249-202ENST00000562624 PARP3Q9Y6F1 533 aa8.26□□□□□ -1.09
LINC02249-202ENST00000562624 BLMP54132 1417 aaPredicted RBP8.26□□□□□ -1.09
LINC02249-202ENST00000562624 ARHGEF28Q8N1W1 1705 aaKnown RBP8.26□□□□□ -1.09
LINC02249-202ENST00000562624 GNAI3P08754 354 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms