RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 EXOC6BQ9Y2D4 811 aa22.8■■□□□ 1.24
SDR39U1-220ENST00000556548 PDIA6Q15084 440 aa22.8■■□□□ 1.24
SDR39U1-220ENST00000556548 USP16Q9Y5T5 823 aa22.8■■□□□ 1.24
SDR39U1-220ENST00000556548 PXDNLA1KZ92 1463 aa22.8■■□□□ 1.24
SDR39U1-220ENST00000556548 NBPF7P0C2Y1 421 aaPredicted RBP22.79■■□□□ 1.24
SDR39U1-220ENST00000556548 DDRGK1Q96HY6 314 aa22.79■■□□□ 1.24
SDR39U1-220ENST00000556548 DDX21Q9NR30 783 aaKnown RBP eCLIP22.79■■□□□ 1.24
SDR39U1-220ENST00000556548 HYPKQ9NX55 129 aa22.79■■□□□ 1.24
SDR39U1-220ENST00000556548 MFAP1P55081 439 aaKnown RBP22.78■■□□□ 1.24
SDR39U1-220ENST00000556548 DEKP35659 375 aaKnown RBP22.77■■□□□ 1.24
SDR39U1-220ENST00000556548 PLEKHM2Q8IWE5 1019 aa22.77■■□□□ 1.24
SDR39U1-220ENST00000556548 UPF2Q9HAU5 1272 aaKnown RBP22.77■■□□□ 1.24
SDR39U1-220ENST00000556548 ATP8B2P98198 1209 aa22.77■■□□□ 1.24
SDR39U1-220ENST00000556548 FMNL2Q96PY5 1086 aa22.77■■□□□ 1.24
SDR39U1-220ENST00000556548 PLEKHG2Q9H7P9 1386 aa22.77■■□□□ 1.23
SDR39U1-220ENST00000556548 SNRPA1P09661 255 aaKnown RBP22.76■■□□□ 1.23
SDR39U1-220ENST00000556548 BMP2KLQ5H9B9 411 aa22.76■■□□□ 1.23
SDR39U1-220ENST00000556548 KSR2Q6VAB6 950 aa22.76■■□□□ 1.23
SDR39U1-220ENST00000556548 CWF19L2Q2TBE0 894 aaKnown RBP22.76■■□□□ 1.23
SDR39U1-220ENST00000556548 PARP4Q9UKK3 1724 aaKnown RBP22.76■■□□□ 1.23
SDR39U1-220ENST00000556548 LTBP4Q8N2S1 1624 aa22.75■■□□□ 1.23
SDR39U1-220ENST00000556548 PIP4K2BP78356 416 aa22.75■■□□□ 1.23
SDR39U1-220ENST00000556548 MRC1P22897 1456 aa22.75■■□□□ 1.23
SDR39U1-220ENST00000556548 C5P01031 1676 aa22.75■■□□□ 1.23
SDR39U1-220ENST00000556548 ADAMTS2O95450 1211 aa22.73■■□□□ 1.23
SDR39U1-220ENST00000556548 XAGE3Q8WTP9 111 aa22.73■■□□□ 1.23
SDR39U1-220ENST00000556548 GSPT1P15170 499 aaKnown RBP22.73■■□□□ 1.23
SDR39U1-220ENST00000556548 COPS6Q7L5N1 327 aa22.73■■□□□ 1.23
SDR39U1-220ENST00000556548 PPP1R42Q7Z4L9 355 aa22.72■■□□□ 1.23
SDR39U1-220ENST00000556548 RIC3Q7Z5B4 369 aa22.72■■□□□ 1.23
SDR39U1-220ENST00000556548 PTCD1O75127 700 aaKnown RBP22.71■■□□□ 1.23
SDR39U1-220ENST00000556548 DDX58O95786 925 aaKnown RBP22.71■■□□□ 1.23
SDR39U1-220ENST00000556548 TBC1D32Q96NH3 1257 aa22.71■■□□□ 1.23
SDR39U1-220ENST00000556548 C9orf78Q9NZ63 289 aaPredicted RBP22.71■■□□□ 1.23
SDR39U1-220ENST00000556548 ERVV-2B6SEH9 535 aa22.71■■□□□ 1.23
SDR39U1-220ENST00000556548 DAXXQ9UER7 740 aaPredicted RBP22.71■■□□□ 1.23
SDR39U1-220ENST00000556548 NKX1-1Q15270 411 aaPredicted RBP22.7■■□□□ 1.22
SDR39U1-220ENST00000556548 N4BP2Q86UW6 1770 aaPredicted RBP22.7■■□□□ 1.22
SDR39U1-220ENST00000556548 ANO8Q9HCE9 1232 aaPredicted RBP22.7■■□□□ 1.22
SDR39U1-220ENST00000556548 SRGAP3O43295 1099 aa22.69■■□□□ 1.22
SDR39U1-220ENST00000556548 AHDC1Q5TGY3 1603 aaPredicted RBP22.69■■□□□ 1.22
SDR39U1-220ENST00000556548 TTC22Q5TAA0 569 aa22.69■■□□□ 1.22
SDR39U1-220ENST00000556548 NUTM2BA6NNL0 878 aaPredicted RBP22.68■■□□□ 1.22
SDR39U1-220ENST00000556548 NUTM2EB1AL46 878 aaPredicted RBP22.68■■□□□ 1.22
SDR39U1-220ENST00000556548 NUTM2AQ8IVF1 878 aaPredicted RBP22.68■■□□□ 1.22
SDR39U1-220ENST00000556548 C22orf23Q9BZE7 217 aa22.68■■□□□ 1.22
SDR39U1-220ENST00000556548 LRRCC1Q9C099 1032 aa22.68■■□□□ 1.22
SDR39U1-220ENST00000556548 TSHZ3Q63HK5 1081 aa22.68■■□□□ 1.22
SDR39U1-220ENST00000556548 TBC1D9Q6ZT07 1266 aa22.68■■□□□ 1.22
SDR39U1-220ENST00000556548 ALDH1L1O75891 902 aa22.67■■□□□ 1.22
SDR39U1-220ENST00000556548 SSH3Q8TE77 659 aa22.67■■□□□ 1.22
SDR39U1-220ENST00000556548 SURF6O75683 361 aaKnown RBP22.66■■□□□ 1.22
SDR39U1-220ENST00000556548 LRP10Q7Z4F1 713 aa22.66■■□□□ 1.22
SDR39U1-220ENST00000556548 LINS1Q8NG48 757 aa22.66■■□□□ 1.22
SDR39U1-220ENST00000556548 MYD88Q99836 296 aa22.66■■□□□ 1.22
SDR39U1-220ENST00000556548 IGKV5-2P06315 115 aa22.65■■□□□ 1.22
SDR39U1-220ENST00000556548 IBTKQ9P2D0 1353 aaPredicted RBP22.65■■□□□ 1.22
SDR39U1-220ENST00000556548 SHANK3Q9BYB0 1731 aa22.65■■□□□ 1.22
SDR39U1-220ENST00000556548 ANKRD13DQ6ZTN6 518 aa22.65■■□□□ 1.22
SDR39U1-220ENST00000556548 IL1RAPL2Q9NP60 686 aa22.65■■□□□ 1.22
SDR39U1-220ENST00000556548 TMOD3Q9NYL9 352 aa22.65■■□□□ 1.22
SDR39U1-220ENST00000556548 POLA2Q14181 598 aa22.64■■□□□ 1.21
SDR39U1-220ENST00000556548 COL16A1Q07092 1604 aaPredicted RBP22.63■■□□□ 1.21
SDR39U1-220ENST00000556548 A1BGP04217 495 aa22.63■■□□□ 1.21
SDR39U1-220ENST00000556548 COL14A1Q05707 1796 aaKnown RBP22.63■■□□□ 1.21
SDR39U1-220ENST00000556548 GRM8O00222 908 aa22.63■■□□□ 1.21
SDR39U1-220ENST00000556548 PDE1AP54750 535 aa22.63■■□□□ 1.21
SDR39U1-220ENST00000556548 NEXNQ0ZGT2 675 aa22.63■■□□□ 1.21
SDR39U1-220ENST00000556548 JARID2Q92833 1246 aaPredicted RBP22.63■■□□□ 1.21
SDR39U1-220ENST00000556548 NBPF26B4DH59 902 aa22.62■■□□□ 1.21
SDR39U1-220ENST00000556548 CDC45O75419 566 aa22.62■■□□□ 1.21
SDR39U1-220ENST00000556548 SDSP20132 328 aa22.62■■□□□ 1.21
SDR39U1-220ENST00000556548 NBPF14Q5TI25 921 aa22.62■■□□□ 1.21
SDR39U1-220ENST00000556548 NBPF10Q6P3W6 841 aaKnown RBP22.62■■□□□ 1.21
SDR39U1-220ENST00000556548 NBPF15Q8N660 670 aa22.62■■□□□ 1.21
SDR39U1-220ENST00000556548 SUCLG2Q96I99 432 aa22.62■■□□□ 1.21
SDR39U1-220ENST00000556548 NEURL1BA8MQ27 555 aa22.61■■□□□ 1.21
SDR39U1-220ENST00000556548 TOM1O60784 492 aa22.61■■□□□ 1.21
SDR39U1-220ENST00000556548 NBR1Q14596 966 aa22.61■■□□□ 1.21
SDR39U1-220ENST00000556548 PIGBQ92521 554 aa22.61■■□□□ 1.21
SDR39U1-220ENST00000556548 METTL22Q9BUU2 404 aaPredicted RBP22.61■■□□□ 1.21
SDR39U1-220ENST00000556548 ASAP1Q9ULH1 1129 aa22.61■■□□□ 1.21
SDR39U1-220ENST00000556548 PHLPP1O60346 1717 aa22.61■■□□□ 1.21
SDR39U1-220ENST00000556548 GLI3P10071 1580 aa22.61■■□□□ 1.21
SDR39U1-220ENST00000556548 COL22A1Q8NFW1 1626 aaPredicted RBP22.6■■□□□ 1.21
SDR39U1-220ENST00000556548 ATP5J2-PTCD1G3V325 749 aa22.6■■□□□ 1.21
SDR39U1-220ENST00000556548 KCPQ6ZWJ8 1503 aa22.59■■□□□ 1.21
SDR39U1-220ENST00000556548 EXOC5O00471 708 aa22.59■■□□□ 1.21
SDR39U1-220ENST00000556548 NUTM1Q86Y26 1132 aa22.59■■□□□ 1.21
SDR39U1-220ENST00000556548 KAZALD1Q96I82 304 aa22.59■■□□□ 1.21
SDR39U1-220ENST00000556548 BICC1Q9H694 974 aaKnown RBP22.59■■□□□ 1.21
SDR39U1-220ENST00000556548 PA2G4Q9UQ80 394 aaKnown RBP22.59■■□□□ 1.21
SDR39U1-220ENST00000556548 MX1P20591 662 aa22.58■■□□□ 1.21
SDR39U1-220ENST00000556548 GCKRQ14397 625 aa22.58■■□□□ 1.21
SDR39U1-220ENST00000556548 SYTL4Q96C24 671 aaPredicted RBP22.58■■□□□ 1.21
SDR39U1-220ENST00000556548 OS9Q13438 667 aaPredicted RBP22.58■■□□□ 1.2
SDR39U1-220ENST00000556548 TTLL7Q6ZT98 887 aa22.58■■□□□ 1.2
SDR39U1-220ENST00000556548 TOGARAM1Q9Y4F4 1720 aa22.58■■□□□ 1.2
SDR39U1-220ENST00000556548 DISP2A7MBM2 1401 aa22.58■■□□□ 1.2
SDR39U1-220ENST00000556548 RHPN1Q8TCX5 695 aa22.57■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms