RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 LARP1Q6PKG0 1096 aaKnown RBP19.22■□□□□ 0.67
SCN8A-206ENST00000550891 C22orf23Q9BZE7 217 aa19.22■□□□□ 0.67
SCN8A-206ENST00000550891 SLC4A3P48751 1232 aa19.21■□□□□ 0.67
SCN8A-206ENST00000550891 BEND3Q5T5X7 828 aa19.21■□□□□ 0.67
SCN8A-206ENST00000550891 PLEKHM2Q8IWE5 1019 aa19.21■□□□□ 0.67
SCN8A-206ENST00000550891 PROSER3Q2NL68 480 aa19.21■□□□□ 0.67
SCN8A-206ENST00000550891 MYL6BP14649 208 aa19.2■□□□□ 0.66
SCN8A-206ENST00000550891 RIC3Q7Z5B4 369 aa19.2■□□□□ 0.66
SCN8A-206ENST00000550891 LRRCC1Q9C099 1032 aa19.2■□□□□ 0.66
SCN8A-206ENST00000550891 NEXNQ0ZGT2 675 aa19.2■□□□□ 0.66
SCN8A-206ENST00000550891 C16orf71Q8IYS4 520 aaPredicted RBP19.2■□□□□ 0.66
SCN8A-206ENST00000550891 CASC1Q6TDU7 716 aa19.19■□□□□ 0.66
SCN8A-206ENST00000550891 PNMA6EA0A0J9YXQ4 647 aa19.19■□□□□ 0.66
SCN8A-206ENST00000550891 CDC45O75419 566 aa19.19■□□□□ 0.66
SCN8A-206ENST00000550891 ALDH1L1O75891 902 aa19.19■□□□□ 0.66
SCN8A-206ENST00000550891 BTG4Q9NY30 223 aa19.19■□□□□ 0.66
SCN8A-206ENST00000550891 ADCY9O60503 1353 aa19.18■□□□□ 0.66
SCN8A-206ENST00000550891 TTC22Q5TAA0 569 aa19.18■□□□□ 0.66
SCN8A-206ENST00000550891 SCN11AQ9UI33 1791 aa19.18■□□□□ 0.66
SCN8A-206ENST00000550891 SRGAP3O43295 1099 aa19.17■□□□□ 0.66
SCN8A-206ENST00000550891 ADAMTS7Q9UKP4 1686 aa19.17■□□□□ 0.66
SCN8A-206ENST00000550891 NBPF7P0C2Y1 421 aaPredicted RBP19.17■□□□□ 0.66
SCN8A-206ENST00000550891 NBR1Q14596 966 aa19.17■□□□□ 0.66
SCN8A-206ENST00000550891 ERVV-2B6SEH9 535 aa19.17■□□□□ 0.66
SCN8A-206ENST00000550891 PPP1R42Q7Z4L9 355 aa19.17■□□□□ 0.66
SCN8A-206ENST00000550891 NHSL1Q5SYE7 1610 aa19.16■□□□□ 0.66
SCN8A-206ENST00000550891 LINS1Q8NG48 757 aa19.16■□□□□ 0.66
SCN8A-206ENST00000550891 SURF6O75683 361 aaKnown RBP19.16■□□□□ 0.66
SCN8A-206ENST00000550891 TBC1D9Q6ZT07 1266 aa19.15■□□□□ 0.66
SCN8A-206ENST00000550891 OS9Q13438 667 aaPredicted RBP19.15■□□□□ 0.66
SCN8A-206ENST00000550891 OTUD7AQ8TE49 926 aaPredicted RBP19.15■□□□□ 0.66
SCN8A-206ENST00000550891 SIPA1L3O60292 1781 aaPredicted RBP19.15■□□□□ 0.66
SCN8A-206ENST00000550891 PKD1L3Q7Z443 1732 aa19.15■□□□□ 0.66
SCN8A-206ENST00000550891 RTL5Q5HYW3 569 aaPredicted RBP19.15■□□□□ 0.66
SCN8A-206ENST00000550891 XAGE3Q8WTP9 111 aa19.15■□□□□ 0.66
SCN8A-206ENST00000550891 PARP4Q9UKK3 1724 aaKnown RBP19.14■□□□□ 0.66
SCN8A-206ENST00000550891 HSP90AB4PQ58FF6 505 aa19.14■□□□□ 0.65
SCN8A-206ENST00000550891 COPS6Q7L5N1 327 aa19.14■□□□□ 0.65
SCN8A-206ENST00000550891 USP16Q9Y5T5 823 aa19.14■□□□□ 0.65
SCN8A-206ENST00000550891 SSH3Q8TE77 659 aa19.14■□□□□ 0.65
SCN8A-206ENST00000550891 GSPT1P15170 499 aaKnown RBP19.13■□□□□ 0.65
SCN8A-206ENST00000550891 CWF19L2Q2TBE0 894 aaKnown RBP19.13■□□□□ 0.65
SCN8A-206ENST00000550891 MRC1P22897 1456 aa19.13■□□□□ 0.65
SCN8A-206ENST00000550891 RAB11FIP3O75154 756 aa19.13■□□□□ 0.65
SCN8A-206ENST00000550891 IBTKQ9P2D0 1353 aaPredicted RBP19.13■□□□□ 0.65
SCN8A-206ENST00000550891 PDIA6Q15084 440 aa19.12■□□□□ 0.65
SCN8A-206ENST00000550891 GRM8O00222 908 aa19.12■□□□□ 0.65
SCN8A-206ENST00000550891 PDE1AP54750 535 aa19.12■□□□□ 0.65
SCN8A-206ENST00000550891 ANKRD13DQ6ZTN6 518 aa19.12■□□□□ 0.65
SCN8A-206ENST00000550891 TMOD3Q9NYL9 352 aa19.12■□□□□ 0.65
SCN8A-206ENST00000550891 PTCD1O75127 700 aaKnown RBP19.11■□□□□ 0.65
SCN8A-206ENST00000550891 MX1P20591 662 aa19.11■□□□□ 0.65
SCN8A-206ENST00000550891 NKX1-1Q15270 411 aaPredicted RBP19.11■□□□□ 0.65
SCN8A-206ENST00000550891 ABCA3Q99758 1704 aa19.11■□□□□ 0.65
SCN8A-206ENST00000550891 PIP4K2AP48426 406 aaPredicted RBP19.1■□□□□ 0.65
SCN8A-206ENST00000550891 MYT1Q01538 1121 aa19.1■□□□□ 0.65
SCN8A-206ENST00000550891 N4BP2Q86UW6 1770 aaPredicted RBP19.1■□□□□ 0.65
SCN8A-206ENST00000550891 KIF1BPQ96EK5 621 aa19.1■□□□□ 0.65
SCN8A-206ENST00000550891 MYD88Q99836 296 aa19.1■□□□□ 0.65
SCN8A-206ENST00000550891 SDSP20132 328 aa19.09■□□□□ 0.65
SCN8A-206ENST00000550891 IL1RAPL2Q9NP60 686 aa19.09■□□□□ 0.65
SCN8A-206ENST00000550891 POLA2Q14181 598 aa19.09■□□□□ 0.65
SCN8A-206ENST00000550891 OSBPL3Q9H4L5 887 aa19.08■□□□□ 0.65
SCN8A-206ENST00000550891 ROBO1Q9Y6N7 1651 aa19.08■□□□□ 0.65
SCN8A-206ENST00000550891 METTL22Q9BUU2 404 aaPredicted RBP19.08■□□□□ 0.64
SCN8A-206ENST00000550891 ERBB4Q15303 1308 aa19.08■□□□□ 0.64
SCN8A-206ENST00000550891 TRIM6-TRIM34B2RNG4 842 aa19.07■□□□□ 0.64
SCN8A-206ENST00000550891 HSCBQ8IWL3 235 aa19.07■□□□□ 0.64
SCN8A-206ENST00000550891 ADAMTS2O95450 1211 aa19.07■□□□□ 0.64
SCN8A-206ENST00000550891 RBM25P49756 843 aaKnown RBP19.07■□□□□ 0.64
SCN8A-206ENST00000550891 RHPN1Q8TCX5 695 aa19.07■□□□□ 0.64
SCN8A-206ENST00000550891 TOM1O60784 492 aa19.06■□□□□ 0.64
SCN8A-206ENST00000550891 PIP4K2BP78356 416 aa19.06■□□□□ 0.64
SCN8A-206ENST00000550891 NEURL1BA8MQ27 555 aa19.05■□□□□ 0.64
SCN8A-206ENST00000550891 EXOC5O00471 708 aa19.05■□□□□ 0.64
SCN8A-206ENST00000550891 MTX1Q13505 466 aa19.05■□□□□ 0.64
SCN8A-206ENST00000550891 ERC1Q8IUD2 1116 aa19.05■□□□□ 0.64
SCN8A-206ENST00000550891 RILPL2Q969X0 211 aa19.05■□□□□ 0.64
SCN8A-206ENST00000550891 REC8O95072 547 aa19.05■□□□□ 0.64
SCN8A-206ENST00000550891 TSHZ3Q63HK5 1081 aa19.05■□□□□ 0.64
SCN8A-206ENST00000550891 GCKRQ14397 625 aa19.04■□□□□ 0.64
SCN8A-206ENST00000550891 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
SCN8A-206ENST00000550891 TBC1D2Q9BYX2 928 aa19.04■□□□□ 0.64
SCN8A-206ENST00000550891 IGKV5-2P06315 115 aa19.04■□□□□ 0.64
SCN8A-206ENST00000550891 PLBD2Q8NHP8 589 aa19.04■□□□□ 0.64
SCN8A-206ENST00000550891 C5P01031 1676 aa19.04■□□□□ 0.64
SCN8A-206ENST00000550891 NUTM1Q86Y26 1132 aa19.03■□□□□ 0.64
SCN8A-206ENST00000550891 SUCLG2Q96I99 432 aa19.03■□□□□ 0.64
SCN8A-206ENST00000550891 AHDC1Q5TGY3 1603 aaPredicted RBP19.03■□□□□ 0.64
SCN8A-206ENST00000550891 NUTM2BA6NNL0 878 aaPredicted RBP19.03■□□□□ 0.64
SCN8A-206ENST00000550891 NUTM2EB1AL46 878 aaPredicted RBP19.03■□□□□ 0.64
SCN8A-206ENST00000550891 NUTM2AQ8IVF1 878 aaPredicted RBP19.03■□□□□ 0.64
SCN8A-206ENST00000550891 ZNF330Q9Y3S2 320 aaPredicted RBP19.03■□□□□ 0.64
SCN8A-206ENST00000550891 G3BP1Q13283 466 aaKnown RBP eCLIP19.03■□□□□ 0.64
SCN8A-206ENST00000550891 SLKQ9H2G2 1235 aaPredicted RBP19.03■□□□□ 0.64
SCN8A-206ENST00000550891 BICC1Q9H694 974 aaKnown RBP19.03■□□□□ 0.64
SCN8A-206ENST00000550891 SYTL4Q96C24 671 aaPredicted RBP19.02■□□□□ 0.64
SCN8A-206ENST00000550891 GPATCH3Q96I76 525 aa19.02■□□□□ 0.64
SCN8A-206ENST00000550891 COL14A1Q05707 1796 aaKnown RBP19.02■□□□□ 0.63
SCN8A-206ENST00000550891 TEX13AQ9BXU3 409 aaPredicted RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms