RNA–Protein interactions for RNA: ENST00000541347.5

CX3CR1-205, Transcript of C-X3-C motif chemokine receptor 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene CX3CR1, Length 3,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1-205ENST00000541347 KSR2Q6VAB6 950 aa13.36□□□□□ -0.27
CX3CR1-205ENST00000541347 ZNF496Q96IT1 587 aaPredicted RBP13.36□□□□□ -0.27
CX3CR1-205ENST00000541347 C22orf23Q9BZE7 217 aa13.36□□□□□ -0.27
CX3CR1-205ENST00000541347 EXOC6BQ9Y2D4 811 aa13.36□□□□□ -0.27
CX3CR1-205ENST00000541347 MAP3K2Q9Y2U5 619 aa13.36□□□□□ -0.27
CX3CR1-205ENST00000541347 PCDH11XQ9BZA7 1347 aa13.36□□□□□ -0.27
CX3CR1-205ENST00000541347 PCDH11YQ9BZA8 1340 aa13.36□□□□□ -0.27
CX3CR1-205ENST00000541347 NBPF7P0C2Y1 421 aaPredicted RBP13.35□□□□□ -0.27
CX3CR1-205ENST00000541347 CABP4P57796 275 aa13.35□□□□□ -0.27
CX3CR1-205ENST00000541347 TTC22Q5TAA0 569 aa13.35□□□□□ -0.27
CX3CR1-205ENST00000541347 LARP1Q6PKG0 1096 aaKnown RBP13.35□□□□□ -0.27
CX3CR1-205ENST00000541347 C5P01031 1676 aa13.35□□□□□ -0.27
CX3CR1-205ENST00000541347 EVA1CP58658 441 aa13.35□□□□□ -0.27
CX3CR1-205ENST00000541347 TTC5Q8N0Z6 440 aa13.35□□□□□ -0.27
CX3CR1-205ENST00000541347 IL2RBP14784 551 aa13.34□□□□□ -0.27
CX3CR1-205ENST00000541347 TBC1D9Q6ZT07 1266 aa13.34□□□□□ -0.27
CX3CR1-205ENST00000541347 SNRPA1P09661 255 aaKnown RBP13.33□□□□□ -0.27
CX3CR1-205ENST00000541347 IBTKQ9P2D0 1353 aaPredicted RBP13.33□□□□□ -0.28
CX3CR1-205ENST00000541347 SSH3Q8TE77 659 aa13.33□□□□□ -0.28
CX3CR1-205ENST00000541347 FMNL2Q96PY5 1086 aa13.33□□□□□ -0.28
CX3CR1-205ENST00000541347 AIMP1Q12904 312 aaKnown RBP13.33□□□□□ -0.28
CX3CR1-205ENST00000541347 LRRCC1Q9C099 1032 aa13.33□□□□□ -0.28
CX3CR1-205ENST00000541347 USP16Q9Y5T5 823 aa13.33□□□□□ -0.28
CX3CR1-205ENST00000541347 CDC45O75419 566 aa13.32□□□□□ -0.28
CX3CR1-205ENST00000541347 ALDH1L1O75891 902 aa13.32□□□□□ -0.28
CX3CR1-205ENST00000541347 POLA2Q14181 598 aa13.32□□□□□ -0.28
CX3CR1-205ENST00000541347 PPP1R42Q7Z4L9 355 aa13.32□□□□□ -0.28
CX3CR1-205ENST00000541347 DDX58O95786 925 aaKnown RBP13.32□□□□□ -0.28
CX3CR1-205ENST00000541347 MYL6BP14649 208 aa13.32□□□□□ -0.28
CX3CR1-205ENST00000541347 NKX1-1Q15270 411 aaPredicted RBP13.32□□□□□ -0.28
CX3CR1-205ENST00000541347 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
CX3CR1-205ENST00000541347 BECN1Q14457 450 aa13.31□□□□□ -0.28
CX3CR1-205ENST00000541347 NBR1Q14596 966 aa13.31□□□□□ -0.28
CX3CR1-205ENST00000541347 CWF19L2Q2TBE0 894 aaKnown RBP13.31□□□□□ -0.28
CX3CR1-205ENST00000541347 OSBPL3Q9H4L5 887 aa13.31□□□□□ -0.28
CX3CR1-205ENST00000541347 ERVV-2B6SEH9 535 aa13.31□□□□□ -0.28
CX3CR1-205ENST00000541347 RBM25P49756 843 aaKnown RBP13.31□□□□□ -0.28
CX3CR1-205ENST00000541347 LRP10Q7Z4F1 713 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 LINS1Q8NG48 757 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 DDX54Q8TDD1 881 aaKnown RBP13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 BTG4Q9NY30 223 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 GLI3P10071 1580 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 SALL3Q9BXA9 1300 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 SRGAP3O43295 1099 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 SDSP20132 328 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 PDE1AP54750 535 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 SHANK3Q9BYB0 1731 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 RIC3Q7Z5B4 369 aa13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 C9orf78Q9NZ63 289 aaPredicted RBP13.3□□□□□ -0.28
CX3CR1-205ENST00000541347 COPS6Q7L5N1 327 aa13.29□□□□□ -0.28
CX3CR1-205ENST00000541347 USP35Q9P2H5 1018 aa13.29□□□□□ -0.28
CX3CR1-205ENST00000541347 AHDC1Q5TGY3 1603 aaPredicted RBP13.29□□□□□ -0.28
CX3CR1-205ENST00000541347 SURF6O75683 361 aaKnown RBP13.28□□□□□ -0.28
CX3CR1-205ENST00000541347 PIP4K2AP48426 406 aaPredicted RBP13.28□□□□□ -0.28
CX3CR1-205ENST00000541347 TBC1D2Q9BYX2 928 aa13.28□□□□□ -0.28
CX3CR1-205ENST00000541347 LTBP4Q8N2S1 1624 aa13.28□□□□□ -0.28
CX3CR1-205ENST00000541347 RAB11FIP3O75154 756 aa13.28□□□□□ -0.28
CX3CR1-205ENST00000541347 UTYO14607 1347 aa13.28□□□□□ -0.28
CX3CR1-205ENST00000541347 IGKV5-2P06315 115 aa13.28□□□□□ -0.28
CX3CR1-205ENST00000541347 MTX1Q13505 466 aa13.28□□□□□ -0.28
CX3CR1-205ENST00000541347 GRM8O00222 908 aa13.27□□□□□ -0.29
CX3CR1-205ENST00000541347 MX1P20591 662 aa13.27□□□□□ -0.29
CX3CR1-205ENST00000541347 TSHZ3Q63HK5 1081 aa13.27□□□□□ -0.29
CX3CR1-205ENST00000541347 METTL22Q9BUU2 404 aaPredicted RBP13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 COL22A1Q8NFW1 1626 aaPredicted RBP13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 LAMB4A4D0S4 1761 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 COL14A1Q05707 1796 aaKnown RBP13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 ANKRD13DQ6ZTN6 518 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 IL1RAPL2Q9NP60 686 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 NEURL1BA8MQ27 555 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 NEXNQ0ZGT2 675 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 RHPN1Q8TCX5 695 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 STAP2Q9UGK3 403 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 UBR2Q8IWV8 1755 aa13.26□□□□□ -0.29
CX3CR1-205ENST00000541347 PAPPAQ13219 1627 aa13.25□□□□□ -0.29
CX3CR1-205ENST00000541347 KAZALD1Q96I82 304 aa13.25□□□□□ -0.29
CX3CR1-205ENST00000541347 SUCLG2Q96I99 432 aa13.25□□□□□ -0.29
CX3CR1-205ENST00000541347 MYD88Q99836 296 aa13.25□□□□□ -0.29
CX3CR1-205ENST00000541347 EIF5BO60841 1220 aaKnown RBP13.25□□□□□ -0.29
CX3CR1-205ENST00000541347 COL16A1Q07092 1604 aaPredicted RBP13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 KIF1BPQ96EK5 621 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 KIF2CQ99661 725 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 CASC1Q6TDU7 716 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 TNS2Q63HR2 1409 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 ERBB4Q15303 1308 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 NBPF26B4DH59 902 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 GCKRQ14397 625 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 HSP90AB4PQ58FF6 505 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 NBPF14Q5TI25 921 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 NBPF10Q6P3W6 841 aaKnown RBP13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 NBPF15Q8N660 670 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 TOGARAM1Q9Y4F4 1720 aa13.24□□□□□ -0.29
CX3CR1-205ENST00000541347 DISP2A7MBM2 1401 aa13.23□□□□□ -0.29
CX3CR1-205ENST00000541347 PTCD1O75127 700 aaKnown RBP13.23□□□□□ -0.29
CX3CR1-205ENST00000541347 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
CX3CR1-205ENST00000541347 BICC1Q9H694 974 aaKnown RBP13.23□□□□□ -0.29
CX3CR1-205ENST00000541347 AOX1Q06278 1338 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms