RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 PTPRCP08575 1304 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 EPS15P42566 896 aa13.37□□□□□ -0.27
PTPRK-221ENST00000532331 UTP14AQ9BVJ6 771 aaKnown RBP13.37□□□□□ -0.27
PTPRK-221ENST00000532331 OGFOD1Q8N543 542 aa13.36□□□□□ -0.27
PTPRK-221ENST00000532331 ZNF444Q8N0Y2 327 aaPredicted RBP13.36□□□□□ -0.27
PTPRK-221ENST00000532331 NFATC2IPQ8NCF5 419 aa13.36□□□□□ -0.27
PTPRK-221ENST00000532331 YEATS2Q9ULM3 1422 aa13.36□□□□□ -0.27
PTPRK-221ENST00000532331 APBA3O96018 575 aa13.36□□□□□ -0.27
PTPRK-221ENST00000532331 CWC27Q6UX04 472 aaKnown RBP13.36□□□□□ -0.27
PTPRK-221ENST00000532331 TARBP1Q13395 1621 aaKnown RBP13.36□□□□□ -0.27
PTPRK-221ENST00000532331 HOXC9P31274 260 aa13.36□□□□□ -0.27
PTPRK-221ENST00000532331 GRM1Q13255 1194 aa13.36□□□□□ -0.27
PTPRK-221ENST00000532331 BAG3O95817 575 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 PI4KAP2A4QPH2 592 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 PI4KAP1Q8N8J0 262 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 SSH1Q8WYL5 1049 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 NAPBQ9H115 298 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 LRRFIP2Q9Y608 721 aaKnown RBP13.35□□□□□ -0.27
PTPRK-221ENST00000532331 DDX17Q92841 729 aaKnown RBP13.35□□□□□ -0.27
PTPRK-221ENST00000532331 FEZ1Q99689 392 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 PRAG1Q86YV5 1406 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 GLRX3O76003 335 aaKnown RBP13.35□□□□□ -0.27
PTPRK-221ENST00000532331 LETM1O95202 739 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-221ENST00000532331 TNNT3P45378 269 aaPredicted RBP13.35□□□□□ -0.27
PTPRK-221ENST00000532331 XAGE3Q8WTP9 111 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 CDKL5O76039 1030 aa13.35□□□□□ -0.27
PTPRK-221ENST00000532331 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-221ENST00000532331 C11orf95C9JLR9 678 aaPredicted RBP13.34□□□□□ -0.27
PTPRK-221ENST00000532331 MBD3O95983 291 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 BOLA2Q9H3K6 86 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 CABP5Q9NP86 173 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 MBIPQ9NS73 344 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 TSPOAP1O95153 1857 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 HLA-DOAP06340 250 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 NF2P35240 595 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 KRT32Q14532 448 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 COPS6Q7L5N1 327 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 MAST1Q9Y2H9 1570 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 ANXA1P04083 346 aa13.34□□□□□ -0.27
PTPRK-221ENST00000532331 EIF2AK4Q9P2K8 1649 aaKnown RBP13.34□□□□□ -0.27
PTPRK-221ENST00000532331 KINO60870 393 aaKnown RBP13.33□□□□□ -0.28
PTPRK-221ENST00000532331 GSTO1P78417 241 aa13.33□□□□□ -0.28
PTPRK-221ENST00000532331 STK3Q13188 491 aa13.33□□□□□ -0.28
PTPRK-221ENST00000532331 NFKBIBQ15653 356 aa13.33□□□□□ -0.28
PTPRK-221ENST00000532331 ZNF772Q68DY9 489 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-221ENST00000532331 BLOC1S2Q6QNY1 142 aa13.33□□□□□ -0.28
PTPRK-221ENST00000532331 SEC63Q9UGP8 760 aaKnown RBP13.33□□□□□ -0.28
PTPRK-221ENST00000532331 LMOD1P29536 600 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-221ENST00000532331 TTF1Q15361 905 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-221ENST00000532331 CCDC96Q2M329 555 aa13.33□□□□□ -0.28
PTPRK-221ENST00000532331 AEBP1Q8IUX7 1158 aa13.33□□□□□ -0.28
PTPRK-221ENST00000532331 MYCNP04198 464 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-221ENST00000532331 CCDC8Q9H0W5 538 aaPredicted RBP13.33□□□□□ -0.28
PTPRK-221ENST00000532331 CHPF2Q9P2E5 772 aa13.33□□□□□ -0.28
PTPRK-221ENST00000532331 NOL7Q9UMY1 257 aaKnown RBP13.33□□□□□ -0.28
PTPRK-221ENST00000532331 LTKP29376 864 aa13.32□□□□□ -0.28
PTPRK-221ENST00000532331 NAP1L1P55209 391 aaKnown RBP13.32□□□□□ -0.28
PTPRK-221ENST00000532331 POLKQ9UBT6 870 aa13.32□□□□□ -0.28
PTPRK-221ENST00000532331 MAPKBP1O60336 1514 aa13.32□□□□□ -0.28
PTPRK-221ENST00000532331 RSPH6AQ9H0K4 717 aa13.32□□□□□ -0.28
PTPRK-221ENST00000532331 PIBF1Q8WXW3 757 aa13.32□□□□□ -0.28
PTPRK-221ENST00000532331 NPHP4O75161 1426 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-221ENST00000532331 OFD1O75665 1012 aa13.32□□□□□ -0.28
PTPRK-221ENST00000532331 CT47A1Q5JQC4 288 aaPredicted RBP13.32□□□□□ -0.28
PTPRK-221ENST00000532331 RALGAPBQ86X10 1494 aa13.32□□□□□ -0.28
PTPRK-221ENST00000532331 TNIP1Q15025 636 aa13.31□□□□□ -0.28
PTPRK-221ENST00000532331 ZC3H12CQ9C0D7 883 aaKnown RBP13.31□□□□□ -0.28
PTPRK-221ENST00000532331 MX1P20591 662 aa13.31□□□□□ -0.28
PTPRK-221ENST00000532331 STK38Q15208 465 aa13.31□□□□□ -0.28
PTPRK-221ENST00000532331 JARID2Q92833 1246 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-221ENST00000532331 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-221ENST00000532331 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
PTPRK-221ENST00000532331 MTHFSDQ2M296 383 aaKnown RBP13.31□□□□□ -0.28
PTPRK-221ENST00000532331 EYA1Q99502 592 aa13.31□□□□□ -0.28
PTPRK-221ENST00000532331 EYA3Q99504 573 aa13.31□□□□□ -0.28
PTPRK-221ENST00000532331 QTRT2Q9H974 415 aaKnown RBP13.31□□□□□ -0.28
PTPRK-221ENST00000532331 TRPC5Q9UL62 973 aaPredicted RBP13.31□□□□□ -0.28
PTPRK-221ENST00000532331 TMEM94Q12767 1356 aa13.31□□□□□ -0.28
PTPRK-221ENST00000532331 ZNF804AQ7Z570 1209 aa13.31□□□□□ -0.28
PTPRK-221ENST00000532331 JMYQ8N9B5 988 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 CHD1O14646 1710 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 RANBP6O60518 1105 aaKnown RBP13.3□□□□□ -0.28
PTPRK-221ENST00000532331 RARSP54136 660 aaKnown RBP13.3□□□□□ -0.28
PTPRK-221ENST00000532331 ZGPATQ8N5A5 531 aaKnown RBP13.3□□□□□ -0.28
PTPRK-221ENST00000532331 MAP3K19Q56UN5 1328 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 CFAP43Q8NDM7 1665 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 UQCRFS1P1P0C7P4 283 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 CCDC184Q52MB2 194 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 MAGI2Q86UL8 1455 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 MRE11P49959 708 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 WASF1Q92558 559 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 RBM17Q96I25 401 aaKnown RBP13.3□□□□□ -0.28
PTPRK-221ENST00000532331 ZHX3Q9H4I2 956 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 RXRBP28702 533 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 ODF2Q5BJF6 829 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 IQCA1Q86XH1 822 aa13.3□□□□□ -0.28
PTPRK-221ENST00000532331 RNF41Q9H4P4 317 aaPredicted RBP13.3□□□□□ -0.28
PTPRK-221ENST00000532331 MAP3K5Q99683 1374 aa13.29□□□□□ -0.28
PTPRK-221ENST00000532331 PDILTQ8N807 584 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms