RNA–Protein interactions for RNA: ENST00000503341.1

ARHGEF28-205, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 2

Gene ARHGEF28, Length 1,926 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-205ENST00000503341 NOP58Q9Y2X3 529 aaKnown RBP23.77■■□□□ 1.4
ARHGEF28-205ENST00000503341 DDX54Q8TDD1 881 aaKnown RBP23.76■■□□□ 1.39
ARHGEF28-205ENST00000503341 ZBTB47Q9UFB7 747 aaPredicted RBP23.76■■□□□ 1.39
ARHGEF28-205ENST00000503341 LRRFIP2Q9Y608 721 aaKnown RBP23.76■■□□□ 1.39
ARHGEF28-205ENST00000503341 BMP2KLQ5H9B9 411 aa23.75■■□□□ 1.39
ARHGEF28-205ENST00000503341 MAP3K2Q9Y2U5 619 aa23.75■■□□□ 1.39
ARHGEF28-205ENST00000503341 COL16A1Q07092 1604 aaPredicted RBP23.75■■□□□ 1.39
ARHGEF28-205ENST00000503341 DDRGK1Q96HY6 314 aa23.74■■□□□ 1.39
ARHGEF28-205ENST00000503341 USP35Q9P2H5 1018 aa23.74■■□□□ 1.39
ARHGEF28-205ENST00000503341 USP16Q9Y5T5 823 aa23.74■■□□□ 1.39
ARHGEF28-205ENST00000503341 PNMA6EA0A0J9YXQ4 647 aa23.73■■□□□ 1.39
ARHGEF28-205ENST00000503341 PLEKHM2Q8IWE5 1019 aa23.72■■□□□ 1.39
ARHGEF28-205ENST00000503341 ALDH1L1O75891 902 aa23.72■■□□□ 1.39
ARHGEF28-205ENST00000503341 DDX58O95786 925 aaKnown RBP23.72■■□□□ 1.39
ARHGEF28-205ENST00000503341 GLI3P10071 1580 aa23.72■■□□□ 1.39
ARHGEF28-205ENST00000503341 PHLPP1O60346 1717 aa23.71■■□□□ 1.39
ARHGEF28-205ENST00000503341 NBPF7P0C2Y1 421 aaPredicted RBP23.71■■□□□ 1.39
ARHGEF28-205ENST00000503341 C16orf71Q8IYS4 520 aaPredicted RBP23.71■■□□□ 1.39
ARHGEF28-205ENST00000503341 ERICH6Q7L0X2 663 aa23.71■■□□□ 1.39
ARHGEF28-205ENST00000503341 AIMP1Q12904 312 aaKnown RBP23.7■■□□□ 1.38
ARHGEF28-205ENST00000503341 DISP2A7MBM2 1401 aa23.69■■□□□ 1.38
ARHGEF28-205ENST00000503341 SMARCA5O60264 1052 aaPredicted RBP23.69■■□□□ 1.38
ARHGEF28-205ENST00000503341 MYL6BP14649 208 aa23.69■■□□□ 1.38
ARHGEF28-205ENST00000503341 LRP10Q7Z4F1 713 aa23.69■■□□□ 1.38
ARHGEF28-205ENST00000503341 UPF2Q9HAU5 1272 aaKnown RBP23.69■■□□□ 1.38
ARHGEF28-205ENST00000503341 APBB1O00213 710 aa23.69■■□□□ 1.38
ARHGEF28-205ENST00000503341 SSH3Q8TE77 659 aa23.68■■□□□ 1.38
ARHGEF28-205ENST00000503341 UBR2Q8IWV8 1755 aa23.67■■□□□ 1.38
ARHGEF28-205ENST00000503341 TOM1O60784 492 aa23.67■■□□□ 1.38
ARHGEF28-205ENST00000503341 LINS1Q8NG48 757 aa23.67■■□□□ 1.38
ARHGEF28-205ENST00000503341 XAGE3Q8WTP9 111 aa23.67■■□□□ 1.38
ARHGEF28-205ENST00000503341 EXOC6BQ9Y2D4 811 aa23.67■■□□□ 1.38
ARHGEF28-205ENST00000503341 PAPPAQ13219 1627 aa23.67■■□□□ 1.38
ARHGEF28-205ENST00000503341 COPS6Q7L5N1 327 aa23.67■■□□□ 1.38
ARHGEF28-205ENST00000503341 LAMB4A4D0S4 1761 aa23.66■■□□□ 1.38
ARHGEF28-205ENST00000503341 POLA2Q14181 598 aa23.66■■□□□ 1.38
ARHGEF28-205ENST00000503341 OTUD7AQ8TE49 926 aaPredicted RBP23.66■■□□□ 1.38
ARHGEF28-205ENST00000503341 TBC1D32Q96NH3 1257 aa23.66■■□□□ 1.38
ARHGEF28-205ENST00000503341 KCPQ6ZWJ8 1503 aa23.66■■□□□ 1.38
ARHGEF28-205ENST00000503341 CWF19L2Q2TBE0 894 aaKnown RBP23.65■■□□□ 1.38
ARHGEF28-205ENST00000503341 PPP1R42Q7Z4L9 355 aa23.65■■□□□ 1.38
ARHGEF28-205ENST00000503341 RIC3Q7Z5B4 369 aa23.65■■□□□ 1.38
ARHGEF28-205ENST00000503341 IBTKQ9P2D0 1353 aaPredicted RBP23.65■■□□□ 1.38
ARHGEF28-205ENST00000503341 TOGARAM1Q9Y4F4 1720 aa23.65■■□□□ 1.38
ARHGEF28-205ENST00000503341 TNS2Q63HR2 1409 aa23.64■■□□□ 1.37
ARHGEF28-205ENST00000503341 GSPT1P15170 499 aaKnown RBP23.64■■□□□ 1.37
ARHGEF28-205ENST00000503341 TTC22Q5TAA0 569 aa23.64■■□□□ 1.37
ARHGEF28-205ENST00000503341 C9orf78Q9NZ63 289 aaPredicted RBP23.64■■□□□ 1.37
ARHGEF28-205ENST00000503341 PLCH1Q4KWH8 1693 aa23.64■■□□□ 1.37
ARHGEF28-205ENST00000503341 ERBB4Q15303 1308 aa23.63■■□□□ 1.37
ARHGEF28-205ENST00000503341 LRRCC1Q9C099 1032 aa23.63■■□□□ 1.37
ARHGEF28-205ENST00000503341 BCL11AQ9H165 835 aa23.63■■□□□ 1.37
ARHGEF28-205ENST00000503341 ADAMTS2O95450 1211 aa23.63■■□□□ 1.37
ARHGEF28-205ENST00000503341 PIP4K2AP48426 406 aaPredicted RBP23.63■■□□□ 1.37
ARHGEF28-205ENST00000503341 PIP4K2BP78356 416 aa23.63■■□□□ 1.37
ARHGEF28-205ENST00000503341 UTYO14607 1347 aa23.62■■□□□ 1.37
ARHGEF28-205ENST00000503341 IGKV5-2P06315 115 aa23.62■■□□□ 1.37
ARHGEF28-205ENST00000503341 MFAP1P55081 439 aaKnown RBP23.62■■□□□ 1.37
ARHGEF28-205ENST00000503341 ANKRD13DQ6ZTN6 518 aa23.62■■□□□ 1.37
ARHGEF28-205ENST00000503341 METTL22Q9BUU2 404 aaPredicted RBP23.62■■□□□ 1.37
ARHGEF28-205ENST00000503341 TMOD3Q9NYL9 352 aa23.62■■□□□ 1.37
ARHGEF28-205ENST00000503341 HDAC5Q9UQL6 1122 aa23.62■■□□□ 1.37
ARHGEF28-205ENST00000503341 SRGAP3O43295 1099 aa23.61■■□□□ 1.37
ARHGEF28-205ENST00000503341 MTX1Q13505 466 aa23.61■■□□□ 1.37
ARHGEF28-205ENST00000503341 ANP32EQ9BTT0 268 aa23.61■■□□□ 1.37
ARHGEF28-205ENST00000503341 GRM8O00222 908 aa23.6■■□□□ 1.37
ARHGEF28-205ENST00000503341 NEXNQ0ZGT2 675 aa23.6■■□□□ 1.37
ARHGEF28-205ENST00000503341 OSBPL3Q9H4L5 887 aa23.6■■□□□ 1.37
ARHGEF28-205ENST00000503341 NBPF26B4DH59 902 aa23.59■■□□□ 1.37
ARHGEF28-205ENST00000503341 PTCD1O75127 700 aaKnown RBP23.59■■□□□ 1.37
ARHGEF28-205ENST00000503341 NBPF14Q5TI25 921 aa23.59■■□□□ 1.37
ARHGEF28-205ENST00000503341 NBPF10Q6P3W6 841 aaKnown RBP23.59■■□□□ 1.37
ARHGEF28-205ENST00000503341 NBPF15Q8N660 670 aa23.59■■□□□ 1.37
ARHGEF28-205ENST00000503341 EXOC5O00471 708 aa23.59■■□□□ 1.37
ARHGEF28-205ENST00000503341 SALL3Q9BXA9 1300 aa23.58■■□□□ 1.37
ARHGEF28-205ENST00000503341 NEURL1BA8MQ27 555 aa23.58■■□□□ 1.37
ARHGEF28-205ENST00000503341 RAB11FIP3O75154 756 aa23.58■■□□□ 1.37
ARHGEF28-205ENST00000503341 TBC1D9Q6ZT07 1266 aa23.58■■□□□ 1.37
ARHGEF28-205ENST00000503341 PIGBQ92521 554 aa23.58■■□□□ 1.37
ARHGEF28-205ENST00000503341 MYD88Q99836 296 aa23.58■■□□□ 1.37
ARHGEF28-205ENST00000503341 C22orf23Q9BZE7 217 aa23.58■■□□□ 1.37
ARHGEF28-205ENST00000503341 NRAPQ86VF7 1730 aa23.58■■□□□ 1.36
ARHGEF28-205ENST00000503341 CDC45O75419 566 aa23.57■■□□□ 1.36
ARHGEF28-205ENST00000503341 SURF6O75683 361 aaKnown RBP23.57■■□□□ 1.36
ARHGEF28-205ENST00000503341 PDE1AP54750 535 aa23.57■■□□□ 1.36
ARHGEF28-205ENST00000503341 WNK3Q9BYP7 1800 aa23.57■■□□□ 1.36
ARHGEF28-205ENST00000503341 NUTM2BA6NNL0 878 aaPredicted RBP23.56■■□□□ 1.36
ARHGEF28-205ENST00000503341 NUTM2EB1AL46 878 aaPredicted RBP23.56■■□□□ 1.36
ARHGEF28-205ENST00000503341 NUTM2AQ8IVF1 878 aaPredicted RBP23.56■■□□□ 1.36
ARHGEF28-205ENST00000503341 PLBD2Q8NHP8 589 aa23.56■■□□□ 1.36
ARHGEF28-205ENST00000503341 SPATA31A1Q5TZJ5 1347 aa23.56■■□□□ 1.36
ARHGEF28-205ENST00000503341 GCKRQ14397 625 aa23.55■■□□□ 1.36
ARHGEF28-205ENST00000503341 KAZALD1Q96I82 304 aa23.55■■□□□ 1.36
ARHGEF28-205ENST00000503341 SUCLG2Q96I99 432 aa23.55■■□□□ 1.36
ARHGEF28-205ENST00000503341 CDCA7Q9BWT1 371 aaPredicted RBP23.55■■□□□ 1.36
ARHGEF28-205ENST00000503341 THRAP3Q9Y2W1 955 aaKnown RBP23.55■■□□□ 1.36
ARHGEF28-205ENST00000503341 LRP6O75581 1613 aa23.55■■□□□ 1.36
ARHGEF28-205ENST00000503341 A1BGP04217 495 aa23.55■■□□□ 1.36
ARHGEF28-205ENST00000503341 ASAP1Q9ULH1 1129 aa23.55■■□□□ 1.36
ARHGEF28-205ENST00000503341 SLC4A3P48751 1232 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms