RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 CASZ1Q86V15 1759 aa12.57□□□□□ -0.4
HLA-B-253ENST00000481849 HOXC9P31274 260 aa12.57□□□□□ -0.4
HLA-B-253ENST00000481849 RRS1Q15050 365 aaKnown RBP12.57□□□□□ -0.4
HLA-B-253ENST00000481849 GGNBP2Q9H3C7 697 aa12.57□□□□□ -0.4
HLA-B-253ENST00000481849 WDR90Q96KV7 1748 aa12.57□□□□□ -0.4
HLA-B-253ENST00000481849 SLC24A1O60721 1099 aa12.56□□□□□ -0.4
HLA-B-253ENST00000481849 SLC15A2Q16348 729 aa12.56□□□□□ -0.4
HLA-B-253ENST00000481849 DMRTA1Q5VZB9 504 aa12.56□□□□□ -0.4
HLA-B-253ENST00000481849 ANKRD36BQ8N2N9 1353 aa12.56□□□□□ -0.4
HLA-B-253ENST00000481849 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
HLA-B-253ENST00000481849 TK2O00142 265 aa12.55□□□□□ -0.4
HLA-B-253ENST00000481849 ZNF454Q8N9F8 522 aa12.55□□□□□ -0.4
HLA-B-253ENST00000481849 SYTL4Q96C24 671 aaPredicted RBP12.55□□□□□ -0.4
HLA-B-253ENST00000481849 KLRG1Q96E93 195 aa12.55□□□□□ -0.4
HLA-B-253ENST00000481849 DDX27Q96GQ7 796 aaKnown RBP12.55□□□□□ -0.4
HLA-B-253ENST00000481849 KCNK17Q96T54 332 aa12.55□□□□□ -0.4
HLA-B-253ENST00000481849 PCGF6Q9BYE7 350 aa12.55□□□□□ -0.4
HLA-B-253ENST00000481849 GPBP1L1Q9HC44 474 aaPredicted RBP12.55□□□□□ -0.4
HLA-B-253ENST00000481849 LTN1O94822 1766 aa12.54□□□□□ -0.4
HLA-B-253ENST00000481849 FYB1O15117 783 aa12.54□□□□□ -0.4
HLA-B-253ENST00000481849 USHBP1Q8N6Y0 703 aa12.54□□□□□ -0.4
HLA-B-253ENST00000481849 SBF2Q86WG5 1849 aa12.53□□□□□ -0.4
HLA-B-253ENST00000481849 RGPD3A6NKT7 1758 aaPredicted RBP12.53□□□□□ -0.4
HLA-B-253ENST00000481849 RGPD4Q7Z3J3 1758 aa12.53□□□□□ -0.4
HLA-B-253ENST00000481849 ZNF827Q17R98 1081 aa12.52□□□□□ -0.41
HLA-B-253ENST00000481849 NBPF6Q5VWK0 638 aa12.52□□□□□ -0.41
HLA-B-253ENST00000481849 NBPF4Q96M43 638 aa12.52□□□□□ -0.41
HLA-B-253ENST00000481849 LRRC4BQ9NT99 713 aa12.52□□□□□ -0.41
HLA-B-253ENST00000481849 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
HLA-B-253ENST00000481849 PRIM1P49642 420 aaKnown RBP12.51□□□□□ -0.41
HLA-B-253ENST00000481849 KCNQ4P56696 695 aa12.51□□□□□ -0.41
HLA-B-253ENST00000481849 GPR162Q16538 588 aa12.51□□□□□ -0.41
HLA-B-253ENST00000481849 CDCA8Q53HL2 280 aa12.51□□□□□ -0.41
HLA-B-253ENST00000481849 ZCRB1Q8TBF4 217 aaKnown RBP12.51□□□□□ -0.41
HLA-B-253ENST00000481849 POLR3GLQ9BT43 218 aa12.51□□□□□ -0.41
HLA-B-253ENST00000481849 NHSQ6T4R5 1651 aa12.51□□□□□ -0.41
HLA-B-253ENST00000481849 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
HLA-B-253ENST00000481849 HSP90AB2PQ58FF8 381 aa12.5□□□□□ -0.41
HLA-B-253ENST00000481849 MTFR1LQ9H019 292 aa12.5□□□□□ -0.41
HLA-B-253ENST00000481849 MEGF6O75095 1541 aa12.5□□□□□ -0.41
HLA-B-253ENST00000481849 RTL1A6NKG5 1358 aa12.49□□□□□ -0.41
HLA-B-253ENST00000481849 PPM1GO15355 546 aaPredicted RBP12.49□□□□□ -0.41
HLA-B-253ENST00000481849 EVI5O60447 810 aa12.49□□□□□ -0.41
HLA-B-253ENST00000481849 CARD14Q9BXL6 1004 aa12.49□□□□□ -0.41
HLA-B-253ENST00000481849 HCSTQ9UBK5 93 aa12.49□□□□□ -0.41
HLA-B-253ENST00000481849 SMG6Q86US8 1419 aaKnown RBP12.48□□□□□ -0.41
HLA-B-253ENST00000481849 NSD3Q9BZ95 1437 aa12.48□□□□□ -0.41
HLA-B-253ENST00000481849 MLLT1Q03111 559 aaPredicted RBP12.48□□□□□ -0.41
HLA-B-253ENST00000481849 RAPGEF4Q8WZA2 1011 aa12.48□□□□□ -0.41
HLA-B-253ENST00000481849 HRO43593 1189 aa12.47□□□□□ -0.41
HLA-B-253ENST00000481849 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
HLA-B-253ENST00000481849 EMILIN1Q9Y6C2 1016 aa12.47□□□□□ -0.41
HLA-B-253ENST00000481849 FOSBP53539 338 aa12.46□□□□□ -0.41
HLA-B-253ENST00000481849 MFSD10Q14728 455 aa12.46□□□□□ -0.41
HLA-B-253ENST00000481849 SLC27A3Q5K4L6 730 aa12.46□□□□□ -0.41
HLA-B-253ENST00000481849 NSD2O96028 1365 aa12.45□□□□□ -0.42
HLA-B-253ENST00000481849 INSRP06213 1382 aa12.45□□□□□ -0.42
HLA-B-253ENST00000481849 FLT4P35916 1363 aa12.45□□□□□ -0.42
HLA-B-253ENST00000481849 FAM208AQ9UK61 1670 aaKnown RBP12.45□□□□□ -0.42
HLA-B-253ENST00000481849 ARXQ96QS3 562 aa12.45□□□□□ -0.42
HLA-B-253ENST00000481849 BCL2L12Q9HB09 334 aa12.45□□□□□ -0.42
HLA-B-253ENST00000481849 TFCP2L1Q9NZI6 479 aa12.45□□□□□ -0.42
HLA-B-253ENST00000481849 CCNL1Q9UK58 526 aaPredicted RBP12.45□□□□□ -0.42
HLA-B-253ENST00000481849 PAPPAQ13219 1627 aa12.44□□□□□ -0.42
HLA-B-253ENST00000481849 MAP3K5Q99683 1374 aa12.44□□□□□ -0.42
HLA-B-253ENST00000481849 BTAF1O14981 1849 aa12.44□□□□□ -0.42
HLA-B-253ENST00000481849 HSPA1AP0DMV8 641 aaKnown RBP12.44□□□□□ -0.42
HLA-B-253ENST00000481849 HSPA1BP0DMV9 641 aaKnown RBP12.44□□□□□ -0.42
HLA-B-253ENST00000481849 PTPREP23469 700 aa12.44□□□□□ -0.42
HLA-B-253ENST00000481849 TIMELESSQ9UNS1 1208 aa12.44□□□□□ -0.42
HLA-B-253ENST00000481849 PNPLA7Q6ZV29 1317 aa12.43□□□□□ -0.42
HLA-B-253ENST00000481849 TNNT2P45379 298 aaPredicted RBP12.43□□□□□ -0.42
HLA-B-253ENST00000481849 CUL9Q8IWT3 2517 aa12.43□□□□□ -0.42
HLA-B-253ENST00000481849 CGNL1Q0VF96 1302 aa12.42□□□□□ -0.42
HLA-B-253ENST00000481849 PCDH11XQ9BZA7 1347 aa12.42□□□□□ -0.42
HLA-B-253ENST00000481849 PCDH11YQ9BZA8 1340 aa12.42□□□□□ -0.42
HLA-B-253ENST00000481849 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
HLA-B-253ENST00000481849 ZNF526Q8TF50 670 aaPredicted RBP12.42□□□□□ -0.42
HLA-B-253ENST00000481849 KCTD12Q96CX2 325 aaKnown RBP12.42□□□□□ -0.42
HLA-B-253ENST00000481849 VPS9D1Q9Y2B5 631 aa12.42□□□□□ -0.42
HLA-B-253ENST00000481849 POLD1P28340 1107 aa12.41□□□□□ -0.42
HLA-B-253ENST00000481849 HTRA3P83110 453 aa12.41□□□□□ -0.42
HLA-B-253ENST00000481849 DOT1LQ8TEK3 1739 aa12.41□□□□□ -0.42
HLA-B-253ENST00000481849 PLA2G2EQ9NZK7 142 aa12.41□□□□□ -0.42
HLA-B-253ENST00000481849 ADCY9O60503 1353 aa12.41□□□□□ -0.42
HLA-B-253ENST00000481849 RGPD2P0DJD1 1756 aa12.41□□□□□ -0.42
HLA-B-253ENST00000481849 CYP27B1O15528 508 aa12.4□□□□□ -0.42
HLA-B-253ENST00000481849 HSPA5P11021 654 aaKnown RBP12.4□□□□□ -0.42
HLA-B-253ENST00000481849 CCER1Q8TC90 406 aaPredicted RBP12.4□□□□□ -0.42
HLA-B-253ENST00000481849 ZDHHC16Q969W1 377 aa12.4□□□□□ -0.42
HLA-B-253ENST00000481849 KIF24Q5T7B8 1368 aa12.4□□□□□ -0.42
HLA-B-253ENST00000481849 CLSPNQ9HAW4 1339 aa12.39□□□□□ -0.43
HLA-B-253ENST00000481849 MSL1Q68DK7 614 aa12.39□□□□□ -0.43
HLA-B-253ENST00000481849 SLC16A10Q8TF71 515 aa12.39□□□□□ -0.43
HLA-B-253ENST00000481849 EMILIN3Q9NT22 766 aa12.39□□□□□ -0.43
HLA-B-253ENST00000481849 EIF4G2P78344 907 aaKnown RBP eCLIP12.38□□□□□ -0.43
HLA-B-253ENST00000481849 COL23A1Q86Y22 540 aaPredicted RBP12.38□□□□□ -0.43
HLA-B-253ENST00000481849 BBXQ8WY36 941 aaPredicted RBP12.38□□□□□ -0.43
HLA-B-253ENST00000481849 EYA1Q99502 592 aa12.38□□□□□ -0.43
HLA-B-253ENST00000481849 POLKQ9UBT6 870 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms