RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 USTQ9Y2C2 406 aa9.45□□□□□ -0.9
MSL3-210ENST00000468149 RREB1Q92766 1687 aa9.45□□□□□ -0.9
MSL3-210ENST00000468149 SF3B2Q13435 895 aaKnown RBP9.45□□□□□ -0.9
MSL3-210ENST00000468149 SH3D19Q5HYK7 790 aa9.45□□□□□ -0.9
MSL3-210ENST00000468149 MARCH10Q8NA82 808 aaPredicted RBP9.45□□□□□ -0.9
MSL3-210ENST00000468149 RAPGEF4Q8WZA2 1011 aa9.45□□□□□ -0.9
MSL3-210ENST00000468149 EYA1Q99502 592 aa9.45□□□□□ -0.9
MSL3-210ENST00000468149 FARP1Q9Y4F1 1045 aaPredicted RBP9.45□□□□□ -0.9
MSL3-210ENST00000468149 IGSF1Q8N6C5 1336 aa9.45□□□□□ -0.9
MSL3-210ENST00000468149 IVNS1ABPQ9Y6Y0 642 aa9.44□□□□□ -0.9
MSL3-210ENST00000468149 PARD3Q8TEW0 1356 aa9.44□□□□□ -0.9
MSL3-210ENST00000468149 COL3A1P02461 1466 aaPredicted RBP9.43□□□□□ -0.9
MSL3-210ENST00000468149 RBM47A0AV96 593 aaKnown RBP9.43□□□□□ -0.9
MSL3-210ENST00000468149 TATP17735 454 aaPredicted RBP9.43□□□□□ -0.9
MSL3-210ENST00000468149 DDX10Q13206 875 aaKnown RBP9.43□□□□□ -0.9
MSL3-210ENST00000468149 RASEFQ8IZ41 740 aa9.43□□□□□ -0.9
MSL3-210ENST00000468149 USHBP1Q8N6Y0 703 aa9.43□□□□□ -0.9
MSL3-210ENST00000468149 ZCRB1Q8TBF4 217 aaKnown RBP9.43□□□□□ -0.9
MSL3-210ENST00000468149 TOGARAM1Q9Y4F4 1720 aa9.43□□□□□ -0.9
MSL3-210ENST00000468149 KDRP35968 1356 aa9.43□□□□□ -0.9
MSL3-210ENST00000468149 SCN11AQ9UI33 1791 aa9.43□□□□□ -0.9
MSL3-210ENST00000468149 LY75O60449 1722 aa9.42□□□□□ -0.9
MSL3-210ENST00000468149 IL13P35225 146 aa9.42□□□□□ -0.9
MSL3-210ENST00000468149 DDX27Q96GQ7 796 aaKnown RBP9.42□□□□□ -0.9
MSL3-210ENST00000468149 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.42□□□□□ -0.92e-8■■■■■ 35.5
MSL3-210ENST00000468149 NUP188Q5SRE5 1749 aa9.42□□□□□ -0.9
MSL3-210ENST00000468149 SPDYE5A6NIY4 337 aa9.42□□□□□ -0.9
MSL3-210ENST00000468149 TRIM37O94972 964 aa9.42□□□□□ -0.9
MSL3-210ENST00000468149 BAG6P46379 1132 aa9.42□□□□□ -0.9
MSL3-210ENST00000468149 TTLL12Q14166 644 aaPredicted RBP9.42□□□□□ -0.9
MSL3-210ENST00000468149 PCDH11XQ9BZA7 1347 aa9.41□□□□□ -0.9
MSL3-210ENST00000468149 PCDH11YQ9BZA8 1340 aa9.41□□□□□ -0.9
MSL3-210ENST00000468149 DIAPH1O60610 1272 aaKnown RBP9.41□□□□□ -0.9
MSL3-210ENST00000468149 PPP2R1AP30153 589 aa9.41□□□□□ -0.9
MSL3-210ENST00000468149 CNGB1Q14028 1251 aaPredicted RBP9.41□□□□□ -0.9
MSL3-210ENST00000468149 PIP4P2Q8N4L2 257 aa9.41□□□□□ -0.9
MSL3-210ENST00000468149 RALBP1Q15311 655 aa9.4□□□□□ -0.9
MSL3-210ENST00000468149 DDX54Q8TDD1 881 aaKnown RBP9.4□□□□□ -0.9
MSL3-210ENST00000468149 CFAP53Q96M91 514 aa9.4□□□□□ -0.9
MSL3-210ENST00000468149 SPG7Q9UQ90 795 aa9.4□□□□□ -0.9
MSL3-210ENST00000468149 DLG5Q8TDM6 1919 aa9.4□□□□□ -0.91
MSL3-210ENST00000468149 MS4A1P11836 297 aa9.39□□□□□ -0.91
MSL3-210ENST00000468149 CALR3Q96L12 384 aaKnown RBP9.39□□□□□ -0.91
MSL3-210ENST00000468149 TAF1LQ8IZX4 1826 aa9.39□□□□□ -0.91
MSL3-210ENST00000468149 PLSCR1O15162 318 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 APBA3O96018 575 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 PDAP1Q13442 181 aaKnown RBP9.38□□□□□ -0.91
MSL3-210ENST00000468149 AMOTQ4VCS5 1084 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 SULT6B1Q6IMI4 303 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 DEFB132Q7Z7B7 95 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 PBXIP1Q96AQ6 731 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 SPATA32Q96LK8 384 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 ADAMTS7Q9UKP4 1686 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 CYP27B1O15528 508 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 SMARCA5O60264 1052 aaPredicted RBP9.38□□□□□ -0.91
MSL3-210ENST00000468149 EN1Q05925 392 aaPredicted RBP9.38□□□□□ -0.91
MSL3-210ENST00000468149 OXER1Q8TDS5 423 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 CAMKK2Q96RR4 588 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 CRISPLD2Q9H0B8 497 aa9.38□□□□□ -0.91
MSL3-210ENST00000468149 PLEKHO1Q53GL0 409 aaPredicted RBP9.37□□□□□ -0.91
MSL3-210ENST00000468149 GIGYF2Q6Y7W6 1299 aaKnown RBP9.37□□□□□ -0.91
MSL3-210ENST00000468149 ZNF467Q7Z7K2 595 aaPredicted RBP9.37□□□□□ -0.91
MSL3-210ENST00000468149 IFNL2Q8IZJ0 200 aa9.37□□□□□ -0.91
MSL3-210ENST00000468149 FBXO22Q8NEZ5 403 aa9.37□□□□□ -0.91
MSL3-210ENST00000468149 NUDCQ9Y266 331 aa9.37□□□□□ -0.91
MSL3-210ENST00000468149 QSER1Q2KHR3 1735 aa9.37□□□□□ -0.91
MSL3-210ENST00000468149 SIPA1L3O60292 1781 aaPredicted RBP9.36□□□□□ -0.91
MSL3-210ENST00000468149 KCNQ2O43526 872 aa9.36□□□□□ -0.91
MSL3-210ENST00000468149 PHKG2P15735 406 aa9.36□□□□□ -0.91
MSL3-210ENST00000468149 CERS3Q8IU89 383 aa9.36□□□□□ -0.91
MSL3-210ENST00000468149 ACSBG1Q96GR2 724 aa9.36□□□□□ -0.91
MSL3-210ENST00000468149 DRC1Q96MC2 740 aa9.36□□□□□ -0.91
MSL3-210ENST00000468149 ZNF831Q5JPB2 1677 aa9.36□□□□□ -0.91
MSL3-210ENST00000468149 MYBBP1AQ9BQG0 1328 aaKnown RBP9.35□□□□□ -0.91
MSL3-210ENST00000468149 C5P01031 1676 aa9.35□□□□□ -0.91
MSL3-210ENST00000468149 HSP90AB1P08238 724 aaKnown RBP9.35□□□□□ -0.91
MSL3-210ENST00000468149 SKIV2LQ15477 1246 aaKnown RBP9.35□□□□□ -0.91
MSL3-210ENST00000468149 EZH2Q15910 746 aaKnown RBP9.35□□□□□ -0.91
MSL3-210ENST00000468149 PTF1AQ7RTS3 328 aa9.35□□□□□ -0.91
MSL3-210ENST00000468149 PRKRIP1Q9H875 184 aaPredicted RBP9.35□□□□□ -0.91
MSL3-210ENST00000468149 KIAA1522Q9P206 1035 aaPredicted RBP9.35□□□□□ -0.91
MSL3-210ENST00000468149 PAPPAQ13219 1627 aa9.35□□□□□ -0.91
MSL3-210ENST00000468149 U2SURPO15042 1029 aaKnown RBP9.34□□□□□ -0.91
MSL3-210ENST00000468149 HMOX1P09601 288 aa9.34□□□□□ -0.91
MSL3-210ENST00000468149 TBC1D12O60347 775 aa9.34□□□□□ -0.91
MSL3-210ENST00000468149 NCLP19338 710 aaKnown RBP9.34□□□□□ -0.91
MSL3-210ENST00000468149 PRIM1P49642 420 aaKnown RBP9.34□□□□□ -0.91
MSL3-210ENST00000468149 ANKRD13AQ8IZ07 590 aa9.34□□□□□ -0.91
MSL3-210ENST00000468149 SYTL4Q96C24 671 aaPredicted RBP9.34□□□□□ -0.91
MSL3-210ENST00000468149 MRRFQ96E11 262 aaKnown RBP9.34□□□□□ -0.91
MSL3-210ENST00000468149 DCAF5Q96JK2 942 aa9.34□□□□□ -0.91
MSL3-210ENST00000468149 TUBGCP6Q96RT7 1819 aa9.34□□□□□ -0.92
MSL3-210ENST00000468149 FCHSD2O94868 740 aa9.33□□□□□ -0.92
MSL3-210ENST00000468149 TAF7LQ5H9L4 462 aa9.33□□□□□ -0.92
MSL3-210ENST00000468149 C1orf141Q5JVX7 400 aa9.33□□□□□ -0.92
MSL3-210ENST00000468149 ZNF530Q6P9A1 599 aaPredicted RBP9.33□□□□□ -0.92
MSL3-210ENST00000468149 KDM6AO15550 1401 aaPredicted RBP9.32□□□□□ -0.92
MSL3-210ENST00000468149 UBR2Q8IWV8 1755 aa9.32□□□□□ -0.92
MSL3-210ENST00000468149 ERVV-2B6SEH9 535 aa9.32□□□□□ -0.92
MSL3-210ENST00000468149 U2AF1L5P0DN76 240 aaPredicted RBP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms