RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 PHLDB1Q86UU1 1377 aa9.56□□□□□ -0.88
EPHA4-204ENST00000415749 ZBTB7BO15156 539 aaPredicted RBP9.56□□□□□ -0.88
EPHA4-204ENST00000415749 GNRH1P01148 92 aa9.56□□□□□ -0.88
EPHA4-204ENST00000415749 SEC13P55735 322 aa9.56□□□□□ -0.88
EPHA4-204ENST00000415749 DPYDQ12882 1025 aa9.56□□□□□ -0.88
EPHA4-204ENST00000415749 ESCO1Q5FWF5 840 aa9.56□□□□□ -0.88
EPHA4-204ENST00000415749 KLF16Q9BXK1 252 aaPredicted RBP9.56□□□□□ -0.88
EPHA4-204ENST00000415749 ADH1AP07327 375 aa9.55□□□□□ -0.88
EPHA4-204ENST00000415749 TIMP2P16035 220 aa9.55□□□□□ -0.88
EPHA4-204ENST00000415749 Q6ZVU0 165 aa9.55□□□□□ -0.88
EPHA4-204ENST00000415749 ZMIZ1Q9ULJ6 1067 aa9.55□□□□□ -0.88
EPHA4-204ENST00000415749 UGGT2Q9NYU1 1516 aa9.55□□□□□ -0.88
EPHA4-204ENST00000415749 FAM187AA6NFU0 413 aa9.54□□□□□ -0.88
EPHA4-204ENST00000415749 HPS1Q92902 700 aa9.54□□□□□ -0.88
EPHA4-204ENST00000415749 KIAA1024Q9UPX6 916 aa9.54□□□□□ -0.88
EPHA4-204ENST00000415749 PATL2C9JE40 543 aaKnown RBP9.53□□□□□ -0.88
EPHA4-204ENST00000415749 BACH1O14867 736 aa9.53□□□□□ -0.88
EPHA4-204ENST00000415749 ADD1P35611 737 aaKnown RBP9.53□□□□□ -0.88
EPHA4-204ENST00000415749 TMEM164Q5U3C3 297 aa9.53□□□□□ -0.88
EPHA4-204ENST00000415749 FAM9AQ8IZU1 332 aaPredicted RBP9.53□□□□□ -0.88
EPHA4-204ENST00000415749 STK32AQ8WU08 396 aa9.53□□□□□ -0.88
EPHA4-204ENST00000415749 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
EPHA4-204ENST00000415749 M0R2N6 131 aa9.52□□□□□ -0.89
EPHA4-204ENST00000415749 WASLO00401 505 aaPredicted RBP9.52□□□□□ -0.89
EPHA4-204ENST00000415749 NRG2O14511 850 aaPredicted RBP9.52□□□□□ -0.89
EPHA4-204ENST00000415749 CAPN5O15484 640 aaPredicted RBP9.52□□□□□ -0.89
EPHA4-204ENST00000415749 IGSF3O75054 1194 aa9.52□□□□□ -0.89
EPHA4-204ENST00000415749 GDF10P55107 478 aa9.52□□□□□ -0.89
EPHA4-204ENST00000415749 CBLBQ13191 982 aa9.52□□□□□ -0.89
EPHA4-204ENST00000415749 LAPTM4AQ15012 233 aa9.52□□□□□ -0.89
EPHA4-204ENST00000415749 SWI5Q1ZZU3 235 aa9.52□□□□□ -0.89
EPHA4-204ENST00000415749 GFRA3O60609 400 aa9.51□□□□□ -0.89
EPHA4-204ENST00000415749 DGAT1O75907 488 aa9.51□□□□□ -0.89
EPHA4-204ENST00000415749 DKK1O94907 266 aa9.51□□□□□ -0.89
EPHA4-204ENST00000415749 UPP2O95045 317 aa9.51□□□□□ -0.89
EPHA4-204ENST00000415749 PKDCCQ504Y2 493 aa9.51□□□□□ -0.89
EPHA4-204ENST00000415749 B4GALNT3Q6L9W6 998 aa9.51□□□□□ -0.89
EPHA4-204ENST00000415749 BCORL1Q5H9F3 1711 aa9.51□□□□□ -0.89
EPHA4-204ENST00000415749 KIAA0556O60303 1618 aa9.5□□□□□ -0.89
EPHA4-204ENST00000415749 MADDQ8WXG6 1647 aa9.5□□□□□ -0.89
EPHA4-204ENST00000415749 TMEM88BA6NKF7 163 aa9.5□□□□□ -0.89
EPHA4-204ENST00000415749 INHAP05111 366 aa9.5□□□□□ -0.89
EPHA4-204ENST00000415749 PTGIRP43119 386 aa9.5□□□□□ -0.89
EPHA4-204ENST00000415749 SCNN1DP51172 638 aa9.5□□□□□ -0.89
EPHA4-204ENST00000415749 MEIOBQ8N635 442 aa9.5□□□□□ -0.89
EPHA4-204ENST00000415749 ARHGEF10LQ9HCE6 1279 aa9.5□□□□□ -0.89
EPHA4-204ENST00000415749 RAPGEF2Q9Y4G8 1499 aa9.5□□□□□ -0.89
EPHA4-204ENST00000415749 SFI1A8K8P3 1242 aa9.49□□□□□ -0.89
EPHA4-204ENST00000415749 E9PSI1 815 aa9.49□□□□□ -0.89
EPHA4-204ENST00000415749 AVPP01185 164 aa9.49□□□□□ -0.89
EPHA4-204ENST00000415749 CTC1Q2NKJ3 1217 aa9.49□□□□□ -0.89
EPHA4-204ENST00000415749 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
EPHA4-204ENST00000415749 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
EPHA4-204ENST00000415749 ETNK1Q9HBU6 452 aa9.49□□□□□ -0.89
EPHA4-204ENST00000415749 ZNF358Q9NW07 568 aa9.49□□□□□ -0.89
EPHA4-204ENST00000415749 TMEM229AB2RXF0 380 aa9.48□□□□□ -0.89
EPHA4-204ENST00000415749 BRD1O95696 1058 aa9.48□□□□□ -0.89
EPHA4-204ENST00000415749 KCNA1Q09470 495 aa9.48□□□□□ -0.89
EPHA4-204ENST00000415749 MLECQ14165 292 aa9.48□□□□□ -0.89
EPHA4-204ENST00000415749 CLP1Q92989 425 aaKnown RBP9.48□□□□□ -0.89
EPHA4-204ENST00000415749 HINFPQ9BQA5 517 aa9.48□□□□□ -0.89
EPHA4-204ENST00000415749 ABCA8O94911 1581 aa9.47□□□□□ -0.89
EPHA4-204ENST00000415749 RELBQ01201 579 aa9.47□□□□□ -0.89
EPHA4-204ENST00000415749 CLN3Q13286 438 aa9.47□□□□□ -0.89
EPHA4-204ENST00000415749 XAGE2Q96GT9 111 aa9.47□□□□□ -0.89
EPHA4-204ENST00000415749 AGBL1Q96MI9 1066 aa9.47□□□□□ -0.89
EPHA4-204ENST00000415749 NLRP3Q96P20 1036 aa9.47□□□□□ -0.89
EPHA4-204ENST00000415749 ATP10BO94823 1461 aa9.47□□□□□ -0.89
EPHA4-204ENST00000415749 GOLGA3Q08378 1498 aa9.47□□□□□ -0.89
EPHA4-204ENST00000415749 NEO1Q92859 1461 aa9.47□□□□□ -0.89
EPHA4-204ENST00000415749 RIMS1Q86UR5 1692 aaKnown RBP9.46□□□□□ -0.89
EPHA4-204ENST00000415749 A0A1W2PRU2 124 aa9.46□□□□□ -0.9
EPHA4-204ENST00000415749 CNKSR1Q969H4 720 aa9.46□□□□□ -0.9
EPHA4-204ENST00000415749 SLC4A9Q96Q91 983 aa9.46□□□□□ -0.9
EPHA4-204ENST00000415749 ESYT1Q9BSJ8 1104 aa9.46□□□□□ -0.9
EPHA4-204ENST00000415749 RAB6BQ9NRW1 208 aa9.46□□□□□ -0.9
EPHA4-204ENST00000415749 SERTAD1Q9UHV2 236 aa9.46□□□□□ -0.9
EPHA4-204ENST00000415749 POGZQ7Z3K3 1410 aa9.46□□□□□ -0.9
EPHA4-204ENST00000415749 MEN1O00255 615 aa9.45□□□□□ -0.9
EPHA4-204ENST00000415749 SMCPP49901 116 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-204ENST00000415749 LINC00528Q8N1L1 170 aa9.45□□□□□ -0.9
EPHA4-204ENST00000415749 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
EPHA4-204ENST00000415749 YEATS2Q9ULM3 1422 aa9.45□□□□□ -0.9
EPHA4-204ENST00000415749 IL2RAP01589 272 aa9.44□□□□□ -0.9
EPHA4-204ENST00000415749 GTF2E1P29083 439 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-204ENST00000415749 TSEN2Q8NCE0 465 aaKnown RBP9.44□□□□□ -0.9
EPHA4-204ENST00000415749 ZNF395Q9H8N7 513 aaPredicted RBP9.44□□□□□ -0.9
EPHA4-204ENST00000415749 SPATA31D1Q6ZQQ2 1576 aa9.43□□□□□ -0.9
EPHA4-204ENST00000415749 AXIN1O15169 862 aa9.43□□□□□ -0.9
EPHA4-204ENST00000415749 STAU1O95793 577 aaKnown RBP9.43□□□□□ -0.9
EPHA4-204ENST00000415749 CEBPAP49715 358 aaPredicted RBP9.43□□□□□ -0.9
EPHA4-204ENST00000415749 SMTNP53814 917 aa9.43□□□□□ -0.9
EPHA4-204ENST00000415749 SCARF1Q14162 830 aa9.43□□□□□ -0.9
EPHA4-204ENST00000415749 TLR1Q15399 786 aa9.43□□□□□ -0.9
EPHA4-204ENST00000415749 NBPF15Q8N660 670 aa9.43□□□□□ -0.9
EPHA4-204ENST00000415749 DENND4BO75064 1496 aaPredicted RBP9.42□□□□□ -0.9
EPHA4-204ENST00000415749 CARNS1A5YM72 827 aa9.42□□□□□ -0.9
EPHA4-204ENST00000415749 A6NJY4 79 aa9.42□□□□□ -0.9
EPHA4-204ENST00000415749 SPINT1O43278 529 aa9.42□□□□□ -0.9
EPHA4-204ENST00000415749 BMP2P12643 396 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms