RNA–Protein interactions for RNA: ENST00000393780.3

GAP43-202, Transcript of growth associated protein 43, humanhuman

TSL 1 (best) BASIC

Gene GAP43, Length 1,901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43-202ENST00000393780 HS1BP3Q53T59 392 aa17.06■□□□□ 0.32
GAP43-202ENST00000393780 PLEKHG5O94827 1062 aa17.05■□□□□ 0.32
GAP43-202ENST00000393780 NCLP19338 710 aaKnown RBP17.05■□□□□ 0.32
GAP43-202ENST00000393780 PPP1R42Q7Z4L9 355 aa17.05■□□□□ 0.32
GAP43-202ENST00000393780 UNC5CLQ8IV45 518 aa17.05■□□□□ 0.32
GAP43-202ENST00000393780 KIF1BPQ96EK5 621 aa17.05■□□□□ 0.32
GAP43-202ENST00000393780 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
GAP43-202ENST00000393780 HSP90AB4PQ58FF6 505 aa17.04■□□□□ 0.32
GAP43-202ENST00000393780 NUTM2GQ5VZR2 741 aa17.04■□□□□ 0.32
GAP43-202ENST00000393780 PI4K2BQ8TCG2 481 aa17.04■□□□□ 0.32
GAP43-202ENST00000393780 RHPN1Q8TCX5 695 aa17.04■□□□□ 0.32
GAP43-202ENST00000393780 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
GAP43-202ENST00000393780 NCAPD2Q15021 1401 aa17.04■□□□□ 0.32
GAP43-202ENST00000393780 RGPD2P0DJD1 1756 aa17.04■□□□□ 0.32
GAP43-202ENST00000393780 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
GAP43-202ENST00000393780 SURF6O75683 361 aaKnown RBP17.03■□□□□ 0.32
GAP43-202ENST00000393780 BEND3Q5T5X7 828 aa17.03■□□□□ 0.32
GAP43-202ENST00000393780 LRSAM1Q6UWE0 723 aa17.03■□□□□ 0.32
GAP43-202ENST00000393780 ZSCAN30Q86W11 494 aa17.03■□□□□ 0.32
GAP43-202ENST00000393780 PDLIM2Q96JY6 352 aa17.03■□□□□ 0.32
GAP43-202ENST00000393780 LMTK3Q96Q04 1460 aa17.03■□□□□ 0.32
GAP43-202ENST00000393780 RAD50Q92878 1312 aa17.02■□□□□ 0.32
GAP43-202ENST00000393780 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.32
GAP43-202ENST00000393780 NAP1L5Q96NT1 182 aaPredicted RBP17.02■□□□□ 0.32
GAP43-202ENST00000393780 RBSNQ9H1K0 784 aa17.02■□□□□ 0.32
GAP43-202ENST00000393780 CAMTA1Q9Y6Y1 1673 aa17.02■□□□□ 0.31
GAP43-202ENST00000393780 SGSM2O43147 1006 aa17.02■□□□□ 0.31
GAP43-202ENST00000393780 MTX1Q13505 466 aa17.02■□□□□ 0.31
GAP43-202ENST00000393780 KCNH5Q8NCM2 988 aa17.02■□□□□ 0.31
GAP43-202ENST00000393780 IL1RAPL2Q9NP60 686 aa17.02■□□□□ 0.31
GAP43-202ENST00000393780 PRIM1P49642 420 aaKnown RBP17.01■□□□□ 0.31
GAP43-202ENST00000393780 AKAP4Q5JQC9 854 aa17.01■□□□□ 0.31
GAP43-202ENST00000393780 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
GAP43-202ENST00000393780 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
GAP43-202ENST00000393780 TMEM63CQ9P1W3 806 aa17.01■□□□□ 0.31
GAP43-202ENST00000393780 TTC41PQ6P2S7 1318 aa17■□□□□ 0.31
GAP43-202ENST00000393780 NBPF6Q5VWK0 638 aa17■□□□□ 0.31
GAP43-202ENST00000393780 CNTROBQ8N137 903 aa17■□□□□ 0.31
GAP43-202ENST00000393780 NBPF4Q96M43 638 aa17■□□□□ 0.31
GAP43-202ENST00000393780 SIPA1L3O60292 1781 aaPredicted RBP17■□□□□ 0.31
GAP43-202ENST00000393780 SRGAP3O43295 1099 aa17■□□□□ 0.31
GAP43-202ENST00000393780 CHPF2Q9P2E5 772 aa17■□□□□ 0.31
GAP43-202ENST00000393780 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
GAP43-202ENST00000393780 ADCY9O60503 1353 aa16.99■□□□□ 0.31
GAP43-202ENST00000393780 WDR33Q9C0J8 1336 aaKnown RBP16.99■□□□□ 0.31
GAP43-202ENST00000393780 ZNF142P52746 1687 aaPredicted RBP16.99■□□□□ 0.31
GAP43-202ENST00000393780 SLIT3O75094 1523 aa16.99■□□□□ 0.31
GAP43-202ENST00000393780 IL25Q9H293 177 aa16.99■□□□□ 0.31
GAP43-202ENST00000393780 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
GAP43-202ENST00000393780 ADAMTS7Q9UKP4 1686 aa16.99■□□□□ 0.31
GAP43-202ENST00000393780 ALDH1L1O75891 902 aa16.98■□□□□ 0.31
GAP43-202ENST00000393780 PLEKHO1Q53GL0 409 aaPredicted RBP16.98■□□□□ 0.31
GAP43-202ENST00000393780 LSG1Q9H089 658 aaKnown RBP16.98■□□□□ 0.31
GAP43-202ENST00000393780 PI4KAP2A4QPH2 592 aa16.98■□□□□ 0.31
GAP43-202ENST00000393780 NBPF7P0C2Y1 421 aaPredicted RBP16.98■□□□□ 0.31
GAP43-202ENST00000393780 EIF2S2P20042 333 aaKnown RBP16.98■□□□□ 0.31
GAP43-202ENST00000393780 AMOTQ4VCS5 1084 aa16.98■□□□□ 0.31
GAP43-202ENST00000393780 PI4KAP1Q8N8J0 262 aa16.98■□□□□ 0.31
GAP43-202ENST00000393780 SYAP1Q96A49 352 aaPredicted RBP16.98■□□□□ 0.31
GAP43-202ENST00000393780 TTC14Q96N46 770 aa16.98■□□□□ 0.31
GAP43-202ENST00000393780 HDAC5Q9UQL6 1122 aa16.98■□□□□ 0.31
GAP43-202ENST00000393780 HEG1Q9ULI3 1381 aa16.98■□□□□ 0.31
GAP43-202ENST00000393780 TMEM87AQ8NBN3 555 aa16.97■□□□□ 0.31
GAP43-202ENST00000393780 SNX14Q9Y5W7 946 aa16.97■□□□□ 0.31
GAP43-202ENST00000393780 GLRX3O76003 335 aaKnown RBP16.96■□□□□ 0.31
GAP43-202ENST00000393780 TEFQ10587 303 aa16.96■□□□□ 0.31
GAP43-202ENST00000393780 UPF3BQ9BZI7 483 aaKnown RBP16.96■□□□□ 0.31
GAP43-202ENST00000393780 DBF4Q9UBU7 674 aaPredicted RBP16.96■□□□□ 0.31
GAP43-202ENST00000393780 NSFL1CQ9UNZ2 370 aaKnown RBP16.96■□□□□ 0.31
GAP43-202ENST00000393780 SETD1BQ9UPS6 1966 aaKnown RBP16.96■□□□□ 0.31
GAP43-202ENST00000393780 BTBD11A6QL63 1104 aa16.96■□□□□ 0.3
GAP43-202ENST00000393780 C14orf37Q86TY3 774 aa16.96■□□□□ 0.3
GAP43-202ENST00000393780 RPAP1Q9BWH6 1393 aaPredicted RBP16.95■□□□□ 0.3
GAP43-202ENST00000393780 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
GAP43-202ENST00000393780 ERC1Q8IUD2 1116 aa16.95■□□□□ 0.3
GAP43-202ENST00000393780 KLHL34Q8N239 644 aa16.95■□□□□ 0.3
GAP43-202ENST00000393780 SYCE3A1L190 88 aa16.94■□□□□ 0.3
GAP43-202ENST00000393780 RNMTO43148 476 aaKnown RBP16.94■□□□□ 0.3
GAP43-202ENST00000393780 TPM2P07951 284 aa16.94■□□□□ 0.3
GAP43-202ENST00000393780 RUFY2Q8WXA3 655 aa16.94■□□□□ 0.3
GAP43-202ENST00000393780 KCNB2Q92953 911 aa16.94■□□□□ 0.3
GAP43-202ENST00000393780 CHAMP1Q96JM3 812 aa16.94■□□□□ 0.3
GAP43-202ENST00000393780 NOL7Q9UMY1 257 aaKnown RBP16.94■□□□□ 0.3
GAP43-202ENST00000393780 KCNQ3O43525 872 aa16.94■□□□□ 0.3
GAP43-202ENST00000393780 PHF14O94880 888 aa16.94■□□□□ 0.3
GAP43-202ENST00000393780 MSNP26038 577 aaKnown RBP16.94■□□□□ 0.3
GAP43-202ENST00000393780 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
GAP43-202ENST00000393780 KIAA1211Q6ZU35 1233 aa16.94■□□□□ 0.3
GAP43-202ENST00000393780 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
GAP43-202ENST00000393780 TCHHQ07283 1943 aa16.93■□□□□ 0.3
GAP43-202ENST00000393780 PXDNQ92626 1479 aa16.93■□□□□ 0.3
GAP43-202ENST00000393780 NOL8Q76FK4 1167 aaKnown RBP16.93■□□□□ 0.3
GAP43-202ENST00000393780 LIMCH1Q9UPQ0 1083 aa16.93■□□□□ 0.3
GAP43-202ENST00000393780 OFD1O75665 1012 aa16.92■□□□□ 0.3
GAP43-202ENST00000393780 MAP4K4O95819 1239 aaPredicted RBP16.92■□□□□ 0.3
GAP43-202ENST00000393780 MCM5P33992 734 aa16.92■□□□□ 0.3
GAP43-202ENST00000393780 KSR2Q6VAB6 950 aa16.92■□□□□ 0.3
GAP43-202ENST00000393780 CLASRPQ8N2M8 674 aaKnown RBP16.92■□□□□ 0.3
GAP43-202ENST00000393780 GPATCH3Q96I76 525 aa16.92■□□□□ 0.3
GAP43-202ENST00000393780 TM6SF1Q9BZW5 370 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms