RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 DNAJC10Q8IXB1 793 aa13.31□□□□□ -0.28
IFT88-203ENST00000389373 MYH14Q7Z406 1995 aaKnown RBP13.31□□□□□ -0.28
IFT88-203ENST00000389373 KDM6AO15550 1401 aaPredicted RBP13.3□□□□□ -0.28
IFT88-203ENST00000389373 COL5A3P25940 1745 aaPredicted RBP13.3□□□□□ -0.28
IFT88-203ENST00000389373 H0YIN7 160 aa13.3□□□□□ -0.28
IFT88-203ENST00000389373 NFKBIEO00221 500 aa13.3□□□□□ -0.28
IFT88-203ENST00000389373 ERFEQ4G0M1 354 aa13.3□□□□□ -0.28
IFT88-203ENST00000389373 BICDL1Q6ZP65 573 aa13.3□□□□□ -0.28
IFT88-203ENST00000389373 ZNF622Q969S3 477 aaKnown RBP eCLIP13.3□□□□□ -0.28
IFT88-203ENST00000389373 CREBZFQ9NS37 354 aa13.3□□□□□ -0.28
IFT88-203ENST00000389373 CHADLQ6NUI6 762 aa13.29□□□□□ -0.28
IFT88-203ENST00000389373 AIDAQ96BJ3 306 aa13.29□□□□□ -0.28
IFT88-203ENST00000389373 ZNF831Q5JPB2 1677 aa13.28□□□□□ -0.28
IFT88-203ENST00000389373 C21orf2O43822 256 aa13.28□□□□□ -0.28
IFT88-203ENST00000389373 POTEIP0CG38 1075 aa13.28□□□□□ -0.28
IFT88-203ENST00000389373 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
IFT88-203ENST00000389373 DDNO94850 711 aaPredicted RBP13.27□□□□□ -0.29
IFT88-203ENST00000389373 AEBP1Q8IUX7 1158 aa13.27□□□□□ -0.29
IFT88-203ENST00000389373 PRDM10Q9NQV6 1147 aa13.27□□□□□ -0.29
IFT88-203ENST00000389373 NARFQ9UHQ1 456 aa13.27□□□□□ -0.29
IFT88-203ENST00000389373 SOS1Q07889 1333 aaPredicted RBP13.27□□□□□ -0.29
IFT88-203ENST00000389373 CYP19A1P11511 503 aaPredicted RBP13.26□□□□□ -0.29
IFT88-203ENST00000389373 CTCFP49711 727 aaPredicted RBP13.26□□□□□ -0.29
IFT88-203ENST00000389373 SLC39A6Q13433 755 aa13.26□□□□□ -0.29
IFT88-203ENST00000389373 CCDC24Q8N4L8 307 aa13.26□□□□□ -0.29
IFT88-203ENST00000389373 SLC34A2O95436 690 aa13.25□□□□□ -0.29
IFT88-203ENST00000389373 CANXP27824 592 aaKnown RBP13.25□□□□□ -0.29
IFT88-203ENST00000389373 LBX1P52954 281 aa13.25□□□□□ -0.29
IFT88-203ENST00000389373 SULT6B1Q6IMI4 303 aa13.25□□□□□ -0.29
IFT88-203ENST00000389373 BCL2L12Q9HB09 334 aa13.25□□□□□ -0.29
IFT88-203ENST00000389373 ZBTB1Q9Y2K1 713 aa13.25□□□□□ -0.29
IFT88-203ENST00000389373 ANKRD26Q9UPS8 1709 aa13.25□□□□□ -0.29
IFT88-203ENST00000389373 COL15A1P39059 1388 aa13.24□□□□□ -0.29
IFT88-203ENST00000389373 CNTNAP1P78357 1384 aa13.24□□□□□ -0.29
IFT88-203ENST00000389373 VEGFBP49765 207 aa13.24□□□□□ -0.29
IFT88-203ENST00000389373 LGR6Q9HBX8 967 aa13.24□□□□□ -0.29
IFT88-203ENST00000389373 CARMIL3Q8ND23 1372 aa13.23□□□□□ -0.29
IFT88-203ENST00000389373 TJP1Q07157 1748 aa13.23□□□□□ -0.29
IFT88-203ENST00000389373 TIAM2Q8IVF5 1701 aa13.23□□□□□ -0.29
IFT88-203ENST00000389373 NPHP1O15259 732 aa13.23□□□□□ -0.29
IFT88-203ENST00000389373 FAM161AQ3B820 660 aa13.23□□□□□ -0.29
IFT88-203ENST00000389373 CLEC11AQ9Y240 323 aa13.23□□□□□ -0.29
IFT88-203ENST00000389373 CCDC88AQ3V6T2 1871 aa13.23□□□□□ -0.29
IFT88-203ENST00000389373 PCNTO95613 3336 aa13.22□□□□□ -0.29
IFT88-203ENST00000389373 TMEM88BA6NKF7 163 aa13.22□□□□□ -0.29
IFT88-203ENST00000389373 PDE6BP35913 854 aa13.22□□□□□ -0.29
IFT88-203ENST00000389373 EAPPQ56P03 285 aaPredicted RBP13.22□□□□□ -0.29
IFT88-203ENST00000389373 SLC52A2Q9HAB3 445 aa13.22□□□□□ -0.29
IFT88-203ENST00000389373 ZNF330Q9Y3S2 320 aaPredicted RBP13.22□□□□□ -0.29
IFT88-203ENST00000389373 AFDNP55196 1824 aaKnown RBP13.21□□□□□ -0.29
IFT88-203ENST00000389373 AKAP4Q5JQC9 854 aa13.21□□□□□ -0.29
IFT88-203ENST00000389373 TBC1D9BQ66K14 1250 aa13.21□□□□□ -0.29
IFT88-203ENST00000389373 TAOK3Q9H2K8 898 aa13.21□□□□□ -0.29
IFT88-203ENST00000389373 IQCA1LA6NCM1 817 aa13.2□□□□□ -0.3
IFT88-203ENST00000389373 RNMTO43148 476 aaKnown RBP13.2□□□□□ -0.3
IFT88-203ENST00000389373 LDHDQ86WU2 507 aa13.2□□□□□ -0.3
IFT88-203ENST00000389373 ABHD8Q96I13 439 aa13.2□□□□□ -0.3
IFT88-203ENST00000389373 BRIP1Q9BX63 1249 aa13.2□□□□□ -0.3
IFT88-203ENST00000389373 WBP1LQ9NX94 342 aa13.2□□□□□ -0.3
IFT88-203ENST00000389373 ADAMTS7Q9UKP4 1686 aa13.19□□□□□ -0.3
IFT88-203ENST00000389373 MORC1Q86VD1 984 aa13.19□□□□□ -0.3
IFT88-203ENST00000389373 TAF1DQ9H5J8 278 aaPredicted RBP13.19□□□□□ -0.3
IFT88-203ENST00000389373 PDZRN3Q9UPQ7 1066 aa13.19□□□□□ -0.3
IFT88-203ENST00000389373 TBC1D2BQ9UPU7 963 aa13.19□□□□□ -0.3
IFT88-203ENST00000389373 PASKQ96RG2 1323 aa13.18□□□□□ -0.3
IFT88-203ENST00000389373 A0A087WZG4 1122 aa13.18□□□□□ -0.3
IFT88-203ENST00000389373 CCDC85CA6NKD9 419 aa13.18□□□□□ -0.3
IFT88-203ENST00000389373 HSPA8P11142 646 aaKnown RBP13.18□□□□□ -0.3
IFT88-203ENST00000389373 DEFB115Q30KQ5 88 aa13.18□□□□□ -0.3
IFT88-203ENST00000389373 PRR5LQ6MZQ0 368 aa13.18□□□□□ -0.3
IFT88-203ENST00000389373 CNKSR1Q969H4 720 aa13.18□□□□□ -0.3
IFT88-203ENST00000389373 NRXN2Q9P2S2 1712 aa13.17□□□□□ -0.3
IFT88-203ENST00000389373 STARD3NLO95772 234 aa13.17□□□□□ -0.3
IFT88-203ENST00000389373 PANK3Q9H999 370 aa13.17□□□□□ -0.3
IFT88-203ENST00000389373 DLEC1Q9Y238 1755 aa13.17□□□□□ -0.3
IFT88-203ENST00000389373 LTBP3Q9NS15 1303 aa13.16□□□□□ -0.3
IFT88-203ENST00000389373 ITGBL1O95965 494 aaPredicted RBP13.16□□□□□ -0.3
IFT88-203ENST00000389373 HMOX1P09601 288 aa13.16□□□□□ -0.3
IFT88-203ENST00000389373 EIF5P55010 431 aaKnown RBP13.16□□□□□ -0.3
IFT88-203ENST00000389373 PRPF40BQ6NWY9 871 aaKnown RBP13.16□□□□□ -0.3
IFT88-203ENST00000389373 PAXIP1Q6ZW49 1069 aaPredicted RBP13.16□□□□□ -0.3
IFT88-203ENST00000389373 NPM2Q86SE8 214 aaKnown RBP13.16□□□□□ -0.3
IFT88-203ENST00000389373 TTC5Q8N0Z6 440 aa13.16□□□□□ -0.3
IFT88-203ENST00000389373 ABT1Q9ULW3 272 aaKnown RBP13.16□□□□□ -0.3
IFT88-203ENST00000389373 IL13P35225 146 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 ST5P78524 1137 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 MAP2K1Q02750 393 aaPredicted RBP13.15□□□□□ -0.3
IFT88-203ENST00000389373 MLLT1Q03111 559 aaPredicted RBP13.15□□□□□ -0.3
IFT88-203ENST00000389373 GRM1Q13255 1194 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 SOGA3Q5TF21 947 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 MAP1SQ66K74 1059 aaPredicted RBP13.15□□□□□ -0.3
IFT88-203ENST00000389373 STYK1Q6J9G0 422 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 VSIG10Q8N0Z9 540 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 CNBD1Q8NA66 436 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 CFAP44Q96MT7 982 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 SETDB2Q96T68 719 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 HACL1Q9UJ83 578 aa13.15□□□□□ -0.3
IFT88-203ENST00000389373 WDR33Q9C0J8 1336 aaKnown RBP13.14□□□□□ -0.31
IFT88-203ENST00000389373 EPHX2P34913 555 aa13.14□□□□□ -0.31
IFT88-203ENST00000389373 CNTROBQ8N137 903 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms