RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 ZNF213O14771 459 aa17.39■□□□□ 0.37
LRRK1-201ENST00000388948 ECM2O94769 699 aaPredicted RBP17.39■□□□□ 0.37
LRRK1-201ENST00000388948 ZNF771Q7L3S4 317 aaPredicted RBP17.39■□□□□ 0.37
LRRK1-201ENST00000388948 ERCC4Q92889 916 aaPredicted RBP17.39■□□□□ 0.37
LRRK1-201ENST00000388948 RNF41Q9H4P4 317 aaPredicted RBP17.39■□□□□ 0.37
LRRK1-201ENST00000388948 HSPA2P54652 639 aa17.39■□□□□ 0.37
LRRK1-201ENST00000388948 CCDC150Q8NCX0 1101 aa17.39■□□□□ 0.37
LRRK1-201ENST00000388948 RAB34Q9BZG1 259 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 TSPY26PQ9H489 355 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 LAMC3Q9Y6N6 1575 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 LMTK3Q96Q04 1460 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 NASPP49321 788 aaPredicted RBP17.38■□□□□ 0.37
LRRK1-201ENST00000388948 SPATA32Q96LK8 384 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 VAT1LQ9HCJ6 419 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 FANCAO15360 1455 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 F8W031 263 aaPredicted RBP17.38■□□□□ 0.37
LRRK1-201ENST00000388948 CCP110O43303 1012 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 SAMM50Q9Y512 469 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 CCDC152Q4G0S7 254 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 SLC12A7Q9Y666 1083 aa17.38■□□□□ 0.37
LRRK1-201ENST00000388948 TMEM57Q8N5G2 664 aa17.37■□□□□ 0.37
LRRK1-201ENST00000388948 F6X3S4 739 aa17.37■□□□□ 0.37
LRRK1-201ENST00000388948 ZSCAN31Q96LW9 406 aaPredicted RBP17.37■□□□□ 0.37
LRRK1-201ENST00000388948 MAP3K2Q9Y2U5 619 aa17.37■□□□□ 0.37
LRRK1-201ENST00000388948 PARP3Q9Y6F1 533 aa17.37■□□□□ 0.37
LRRK1-201ENST00000388948 EIF5P55010 431 aaKnown RBP17.37■□□□□ 0.37
LRRK1-201ENST00000388948 TMEM266Q2M3C6 531 aa17.37■□□□□ 0.37
LRRK1-201ENST00000388948 TOP2BQ02880 1626 aa17.37■□□□□ 0.37
LRRK1-201ENST00000388948 CATIPQ7Z7H3 387 aa17.37■□□□□ 0.37
LRRK1-201ENST00000388948 SMARCC1Q92922 1105 aaPredicted RBP17.37■□□□□ 0.37
LRRK1-201ENST00000388948 RBM26Q5T8P6 1007 aaKnown RBP17.36■□□□□ 0.37
LRRK1-201ENST00000388948 SPC24Q8NBT2 197 aa17.36■□□□□ 0.37
LRRK1-201ENST00000388948 JDP2Q8WYK2 163 aa17.36■□□□□ 0.37
LRRK1-201ENST00000388948 CCDC192P0DO97 292 aa17.36■□□□□ 0.37
LRRK1-201ENST00000388948 ACEP12821 1306 aa17.36■□□□□ 0.37
LRRK1-201ENST00000388948 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
LRRK1-201ENST00000388948 TSPY2A6NKD2 308 aa17.35■□□□□ 0.37
LRRK1-201ENST00000388948 SNRPA1P09661 255 aaKnown RBP17.35■□□□□ 0.37
LRRK1-201ENST00000388948 UBE3BQ7Z3V4 1068 aa17.35■□□□□ 0.37
LRRK1-201ENST00000388948 PDE4BQ07343 736 aa17.35■□□□□ 0.37
LRRK1-201ENST00000388948 NFKBIBQ15653 356 aa17.35■□□□□ 0.37
LRRK1-201ENST00000388948 NLRP3Q96P20 1036 aa17.35■□□□□ 0.37
LRRK1-201ENST00000388948 WDR70Q9NW82 654 aa17.35■□□□□ 0.37
LRRK1-201ENST00000388948 TTC21BQ7Z4L5 1316 aa17.35■□□□□ 0.37
LRRK1-201ENST00000388948 NLRP5P59047 1200 aa17.35■□□□□ 0.37
LRRK1-201ENST00000388948 MX1P20591 662 aa17.35■□□□□ 0.37
LRRK1-201ENST00000388948 LRRFIP2Q9Y608 721 aaKnown RBP17.35■□□□□ 0.37
LRRK1-201ENST00000388948 CCDC39Q9UFE4 941 aa17.34■□□□□ 0.37
LRRK1-201ENST00000388948 BAG4O95429 457 aaKnown RBP17.34■□□□□ 0.37
LRRK1-201ENST00000388948 CCDC194A0A1B0GVG4 234 aa17.34■□□□□ 0.37
LRRK1-201ENST00000388948 CAMSAP2Q08AD1 1489 aa17.34■□□□□ 0.37
LRRK1-201ENST00000388948 TTF1Q15361 905 aaPredicted RBP17.34■□□□□ 0.37
LRRK1-201ENST00000388948 LMOD1P29536 600 aaPredicted RBP17.34■□□□□ 0.37
LRRK1-201ENST00000388948 ADGRF5Q8IZF2 1346 aa17.34■□□□□ 0.37
LRRK1-201ENST00000388948 SMARCA5O60264 1052 aaPredicted RBP17.33■□□□□ 0.37
LRRK1-201ENST00000388948 CETN2P41208 172 aa17.33■□□□□ 0.37
LRRK1-201ENST00000388948 ANAPC15P60006 121 aa17.33■□□□□ 0.37
LRRK1-201ENST00000388948 GSTO1P78417 241 aa17.33■□□□□ 0.37
LRRK1-201ENST00000388948 VEZTQ9HBM0 779 aa17.33■□□□□ 0.37
LRRK1-201ENST00000388948 RTCBQ9Y3I0 505 aaKnown RBP17.33■□□□□ 0.36
LRRK1-201ENST00000388948 TSG101Q99816 390 aa17.33■□□□□ 0.36
LRRK1-201ENST00000388948 PRPF40BQ6NWY9 871 aaKnown RBP17.33■□□□□ 0.36
LRRK1-201ENST00000388948 BIN2Q9UBW5 565 aaPredicted RBP17.33■□□□□ 0.36
LRRK1-201ENST00000388948 ENOX2Q16206 610 aaKnown RBP17.32■□□□□ 0.36
LRRK1-201ENST00000388948 MAP3K9P80192 1104 aa17.32■□□□□ 0.36
LRRK1-201ENST00000388948 CABLES1Q8TDN4 633 aa17.32■□□□□ 0.36
LRRK1-201ENST00000388948 SNRKQ9NRH2 765 aa17.32■□□□□ 0.36
LRRK1-201ENST00000388948 GRIN2AQ12879 1464 aa17.32■□□□□ 0.36
LRRK1-201ENST00000388948 GOLGA6L10A6NI86 522 aa17.32■□□□□ 0.36
LRRK1-201ENST00000388948 CBFA2T2O43439 604 aa17.32■□□□□ 0.36
LRRK1-201ENST00000388948 FAM177A1Q8N128 213 aaPredicted RBP17.32■□□□□ 0.36
LRRK1-201ENST00000388948 KAT14Q9H8E8 782 aa17.32■□□□□ 0.36
LRRK1-201ENST00000388948 TEX14Q8IWB6 1497 aa17.32■□□□□ 0.36
LRRK1-201ENST00000388948 JARID2Q92833 1246 aaPredicted RBP17.31■□□□□ 0.36
LRRK1-201ENST00000388948 NIP7Q9Y221 180 aaKnown RBP eCLIP17.31■□□□□ 0.36
LRRK1-201ENST00000388948 GOLIM4O00461 696 aa17.31■□□□□ 0.36
LRRK1-201ENST00000388948 HSP90AA2PQ14568 343 aaPredicted RBP17.31■□□□□ 0.36
LRRK1-201ENST00000388948 AXDND1Q5T1B0 1012 aaPredicted RBP17.31■□□□□ 0.36
LRRK1-201ENST00000388948 K7ELQ4 463 aaPredicted RBP17.31■□□□□ 0.36
LRRK1-201ENST00000388948 PLS1Q14651 629 aa17.31■□□□□ 0.36
LRRK1-201ENST00000388948 CKAP2LQ8IYA6 745 aa17.31■□□□□ 0.36
LRRK1-201ENST00000388948 ZNF397Q8NF99 534 aaPredicted RBP17.31■□□□□ 0.36
LRRK1-201ENST00000388948 KIF5BP33176 963 aa17.31■□□□□ 0.36
LRRK1-201ENST00000388948 TRAK2O60296 914 aa17.3■□□□□ 0.36
LRRK1-201ENST00000388948 SSRP1Q08945 709 aaKnown RBP17.3■□□□□ 0.36
LRRK1-201ENST00000388948 TIAM1Q13009 1591 aa17.3■□□□□ 0.36
LRRK1-201ENST00000388948 PLCD3Q8N3E9 789 aa17.3■□□□□ 0.36
LRRK1-201ENST00000388948 CCDC12Q8WUD4 166 aaPredicted RBP17.3■□□□□ 0.36
LRRK1-201ENST00000388948 CRNKL1Q9BZJ0 848 aaKnown RBP17.3■□□□□ 0.36
LRRK1-201ENST00000388948 NOS1P29475 1434 aa17.3■□□□□ 0.36
LRRK1-201ENST00000388948 GBP2P32456 591 aaPredicted RBP17.3■□□□□ 0.36
LRRK1-201ENST00000388948 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.3■□□□□ 0.36
LRRK1-201ENST00000388948 STX8Q9UNK0 236 aa17.3■□□□□ 0.36
LRRK1-201ENST00000388948 LRRC59Q96AG4 307 aaKnown RBP17.3■□□□□ 0.36
LRRK1-201ENST00000388948 ZC3H12CQ9C0D7 883 aaKnown RBP17.29■□□□□ 0.36
LRRK1-201ENST00000388948 FLIIQ13045 1269 aa17.29■□□□□ 0.36
LRRK1-201ENST00000388948 TTC16Q8NEE8 873 aa17.29■□□□□ 0.36
LRRK1-201ENST00000388948 C8orf76Q96K31 380 aa17.29■□□□□ 0.36
LRRK1-201ENST00000388948 GOLGA8AA7E2F4 631 aa17.29■□□□□ 0.36
LRRK1-201ENST00000388948 GOLGA8BA8MQT2 603 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms