RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 LARP1Q6PKG0 1096 aaKnown RBP9.91□□□□□ -0.82
CKAP2-203ENST00000378037 TBC1D9Q6ZT07 1266 aa9.91□□□□□ -0.82
CKAP2-203ENST00000378037 ZNF496Q96IT1 587 aaPredicted RBP9.91□□□□□ -0.82
CKAP2-203ENST00000378037 MSH6P52701 1360 aa9.91□□□□□ -0.82
CKAP2-203ENST00000378037 ZNF219Q9P2Y4 722 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-203ENST00000378037 MED1Q15648 1581 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-203ENST00000378037 ZBTB7BO15156 539 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-203ENST00000378037 GNAI3P08754 354 aa9.9□□□□□ -0.82
CKAP2-203ENST00000378037 SLAIN2Q9P270 581 aa9.9□□□□□ -0.82
CKAP2-203ENST00000378037 PPP1R1BQ9UD71 204 aaPredicted RBP9.9□□□□□ -0.82
CKAP2-203ENST00000378037 BRPF3Q9ULD4 1205 aa9.9□□□□□ -0.82
CKAP2-203ENST00000378037 TBC1D2Q9BYX2 928 aa9.9□□□□□ -0.83
CKAP2-203ENST00000378037 GDPD2Q9HCC8 539 aa9.9□□□□□ -0.83
CKAP2-203ENST00000378037 CEBPZQ03701 1054 aaKnown RBP9.89□□□□□ -0.83
CKAP2-203ENST00000378037 PHRF1Q9P1Y6 1649 aaKnown RBP9.89□□□□□ -0.83
CKAP2-203ENST00000378037 VPS37CA5D8V6 355 aaPredicted RBP9.89□□□□□ -0.83
CKAP2-203ENST00000378037 RAD21O60216 631 aa9.89□□□□□ -0.83
CKAP2-203ENST00000378037 SAMD1Q6SPF0 538 aaPredicted RBP9.89□□□□□ -0.83
CKAP2-203ENST00000378037 IL27Q8NEV9 243 aa9.89□□□□□ -0.83
CKAP2-203ENST00000378037 IP6K1Q92551 441 aa9.89□□□□□ -0.83
CKAP2-203ENST00000378037 TMOD3Q9NYL9 352 aa9.89□□□□□ -0.83
CKAP2-203ENST00000378037 PLEKHG3A1L390 1219 aa9.89□□□□□ -0.83
CKAP2-203ENST00000378037 CDC45O75419 566 aa9.89□□□□□ -0.83
CKAP2-203ENST00000378037 ZNF594Q96JF6 807 aaPredicted RBP9.89□□□□□ -0.83
CKAP2-203ENST00000378037 LRRC2Q9BYS8 371 aa9.89□□□□□ -0.83
CKAP2-203ENST00000378037 TRPM3Q9HCF6 1732 aaPredicted RBP9.89□□□□□ -0.83
CKAP2-203ENST00000378037 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.89□□□□□ -0.83
CKAP2-203ENST00000378037 BLMP54132 1417 aaPredicted RBP9.88□□□□□ -0.83
CKAP2-203ENST00000378037 MCCP23508 829 aa9.88□□□□□ -0.83
CKAP2-203ENST00000378037 MCTP1Q6DN14 999 aa9.88□□□□□ -0.83
CKAP2-203ENST00000378037 EDC4Q6P2E9 1401 aaKnown RBP9.88□□□□□ -0.83
CKAP2-203ENST00000378037 ADAMTS13Q76LX8 1427 aa9.88□□□□□ -0.83
CKAP2-203ENST00000378037 GOLGA6L22H0YM25 854 aa9.88□□□□□ -0.83
CKAP2-203ENST00000378037 SDSP20132 328 aa9.88□□□□□ -0.83
CKAP2-203ENST00000378037 RNF214Q8ND24 703 aa9.88□□□□□ -0.83
CKAP2-203ENST00000378037 CCT4P50991 539 aaKnown RBP9.88□□□□□ -0.83
CKAP2-203ENST00000378037 DDX46Q7L014 1031 aaKnown RBP9.88□□□□□ -0.83
CKAP2-203ENST00000378037 FERMT3Q86UX7 667 aa9.88□□□□□ -0.83
CKAP2-203ENST00000378037 FAM89AQ96GI7 184 aa9.88□□□□□ -0.83
CKAP2-203ENST00000378037 CHL1O00533 1208 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 CEP85Q6P2H3 762 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 NSD2O96028 1365 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 MX1P20591 662 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 IFNL2Q8IZJ0 200 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 KIAA0232Q92628 1395 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 TULP4Q9NRJ4 1543 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 ALDH1L2Q3SY69 923 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 RNF123Q5XPI4 1314 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 NPHP3Q7Z494 1330 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 PIBF1Q8WXW3 757 aa9.87□□□□□ -0.83
CKAP2-203ENST00000378037 DBF4Q9UBU7 674 aaPredicted RBP9.87□□□□□ -0.83
CKAP2-203ENST00000378037 DDX49Q9Y6V7 483 aaKnown RBP9.87□□□□□ -0.83
CKAP2-203ENST00000378037 ABCC6O95255 1503 aa9.86□□□□□ -0.83
CKAP2-203ENST00000378037 NPHP4O75161 1426 aaPredicted RBP9.86□□□□□ -0.83
CKAP2-203ENST00000378037 INTS3Q68E01 1043 aaKnown RBP9.86□□□□□ -0.83
CKAP2-203ENST00000378037 SIRT2Q8IXJ6 389 aa9.86□□□□□ -0.83
CKAP2-203ENST00000378037 ZCRB1Q8TBF4 217 aaKnown RBP9.86□□□□□ -0.83
CKAP2-203ENST00000378037 AKAP12Q02952 1782 aa9.86□□□□□ -0.83
CKAP2-203ENST00000378037 NRKQ7Z2Y5 1582 aa9.86□□□□□ -0.83
CKAP2-203ENST00000378037 RNMTO43148 476 aaKnown RBP9.86□□□□□ -0.83
CKAP2-203ENST00000378037 FAM98CQ17RN3 349 aaKnown RBP9.86□□□□□ -0.83
CKAP2-203ENST00000378037 RRP12Q5JTH9 1297 aaKnown RBP9.86□□□□□ -0.83
CKAP2-203ENST00000378037 CCDC82Q8N4S0 544 aa9.86□□□□□ -0.83
CKAP2-203ENST00000378037 CNNM1Q9NRU3 951 aa9.86□□□□□ -0.83
CKAP2-203ENST00000378037 COL16A1Q07092 1604 aaPredicted RBP9.86□□□□□ -0.83
CKAP2-203ENST00000378037 KDM2BQ8NHM5 1336 aa9.86□□□□□ -0.83
CKAP2-203ENST00000378037 GCC1Q96CN9 775 aa9.86□□□□□ -0.83
CKAP2-203ENST00000378037 UTRNP46939 3433 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 TTC21AQ8NDW8 1320 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 ST18O60284 1047 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 HAND2P61296 217 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 TIMM10P62072 90 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 SLFNL1Q499Z3 407 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 LMBR1LQ6UX01 489 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 ANKRD13DQ6ZTN6 518 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 GPATCH3Q96I76 525 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 SNAP23O00161 211 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 ATP2B1P20020 1258 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 PRIM1P49642 420 aaKnown RBP9.85□□□□□ -0.83
CKAP2-203ENST00000378037 TTLL7Q6ZT98 887 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 CHST3Q7LGC8 479 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 SYNE4Q8N205 404 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 ANP32BQ92688 251 aaKnown RBP9.85□□□□□ -0.83
CKAP2-203ENST00000378037 USP32Q8NFA0 1604 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 INSRP06213 1382 aa9.85□□□□□ -0.83
CKAP2-203ENST00000378037 ZNF790Q6PG37 636 aa9.84□□□□□ -0.83
CKAP2-203ENST00000378037 ASAP1Q9ULH1 1129 aa9.84□□□□□ -0.83
CKAP2-203ENST00000378037 EXOC5O00471 708 aa9.84□□□□□ -0.83
CKAP2-203ENST00000378037 PRPF40BQ6NWY9 871 aaKnown RBP9.84□□□□□ -0.83
CKAP2-203ENST00000378037 DDX11Q96FC9 970 aa9.84□□□□□ -0.83
CKAP2-203ENST00000378037 PHF23Q9BUL5 403 aaPredicted RBP9.84□□□□□ -0.83
CKAP2-203ENST00000378037 ABCF2Q9UG63 623 aa9.84□□□□□ -0.83
CKAP2-203ENST00000378037 IDH1O75874 414 aaKnown RBP9.84□□□□□ -0.83
CKAP2-203ENST00000378037 VPS37DQ86XT2 251 aa9.84□□□□□ -0.83
CKAP2-203ENST00000378037 DNAJC10Q8IXB1 793 aa9.84□□□□□ -0.83
CKAP2-203ENST00000378037 TRMT2AQ8IZ69 625 aaKnown RBP9.84□□□□□ -0.83
CKAP2-203ENST00000378037 BICC1Q9H694 974 aaKnown RBP9.84□□□□□ -0.83
CKAP2-203ENST00000378037 USP6P35125 1406 aa9.84□□□□□ -0.83
CKAP2-203ENST00000378037 ALS2Q96Q42 1657 aa9.84□□□□□ -0.83
CKAP2-203ENST00000378037 WNK3Q9BYP7 1800 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms