RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 PPP4R2Q9NY27 417 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 BARGINQ6ZT62 677 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 ZSCAN29Q8IWY8 852 aaPredicted RBP10.03□□□□□ -0.8
SSR2-202ENST00000368311 RBM27Q9P2N5 1060 aaKnown RBP10.03□□□□□ -0.8
SSR2-202ENST00000368311 CTNNA3Q9UI47 895 aa10.03□□□□□ -0.8
SSR2-202ENST00000368311 CHAF1AQ13111 956 aaPredicted RBP10.02□□□□□ -0.8
SSR2-202ENST00000368311 IKQ13123 557 aaPredicted RBP10.02□□□□□ -0.8
SSR2-202ENST00000368311 TNIP1Q15025 636 aa10.02□□□□□ -0.8
SSR2-202ENST00000368311 PODXL2Q9NZ53 605 aa10.02□□□□□ -0.8
SSR2-202ENST00000368311 REC8O95072 547 aa10.02□□□□□ -0.81
SSR2-202ENST00000368311 CRACR2BQ8N4Y2 399 aaPredicted RBP10.02□□□□□ -0.81
SSR2-202ENST00000368311 SH2D4AQ9H788 454 aa10.02□□□□□ -0.81
SSR2-202ENST00000368311 CDC42BPBQ9Y5S2 1711 aa10.02□□□□□ -0.81
SSR2-202ENST00000368311 DZIP1Q86YF9 867 aaKnown RBP10.02□□□□□ -0.81
SSR2-202ENST00000368311 CDK12Q9NYV4 1490 aaPredicted RBP10.01□□□□□ -0.81
SSR2-202ENST00000368311 INSRP06213 1382 aa10.01□□□□□ -0.81
SSR2-202ENST00000368311 AATKQ6ZMQ8 1374 aa10.01□□□□□ -0.81
SSR2-202ENST00000368311 METTL24Q5JXM2 366 aa10.01□□□□□ -0.81
SSR2-202ENST00000368311 ZC3H12CQ9C0D7 883 aaKnown RBP10.01□□□□□ -0.81
SSR2-202ENST00000368311 ALDH1L1O75891 902 aa10.01□□□□□ -0.81
SSR2-202ENST00000368311 TNFAIP1Q13829 316 aa10.01□□□□□ -0.81
SSR2-202ENST00000368311 HSCBQ8IWL3 235 aa10.01□□□□□ -0.81
SSR2-202ENST00000368311 PNMA2Q9UL42 364 aa10.01□□□□□ -0.81
SSR2-202ENST00000368311 RNF123Q5XPI4 1314 aa10.01□□□□□ -0.81
SSR2-202ENST00000368311 H7C1D1 291 aa10.01□□□□□ -0.81
SSR2-202ENST00000368311 SPHKAPQ2M3C7 1700 aa10□□□□□ -0.81
SSR2-202ENST00000368311 SLC4A2P04920 1241 aa10□□□□□ -0.81
SSR2-202ENST00000368311 PSMA5P28066 241 aa10□□□□□ -0.81
SSR2-202ENST00000368311 CABLES1Q8TDN4 633 aa10□□□□□ -0.81
SSR2-202ENST00000368311 NIP7Q9Y221 180 aaKnown RBP eCLIP10□□□□□ -0.81
SSR2-202ENST00000368311 FKBP8Q14318 412 aa10□□□□□ -0.81
SSR2-202ENST00000368311 AMER1Q5JTC6 1135 aaPredicted RBP10□□□□□ -0.81
SSR2-202ENST00000368311 CRB1P82279 1406 aa10□□□□□ -0.81
SSR2-202ENST00000368311 C1orf167Q5SNV9 1468 aa10□□□□□ -0.81
SSR2-202ENST00000368311 RAD21O60216 631 aa10□□□□□ -0.81
SSR2-202ENST00000368311 TRIM21P19474 475 aaKnown RBP10□□□□□ -0.81
SSR2-202ENST00000368311 ZBED9Q6R2W3 1325 aa10□□□□□ -0.81
SSR2-202ENST00000368311 KDM5AP29375 1690 aaKnown RBP9.99□□□□□ -0.81
SSR2-202ENST00000368311 TCERG1O14776 1098 aaKnown RBP9.99□□□□□ -0.81
SSR2-202ENST00000368311 PLIN1O60240 522 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 MAP3K12Q12852 859 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 PABPC4Q13310 644 aaKnown RBP eCLIP9.99□□□□□ -0.811e-8■■■■□ 19.6
SSR2-202ENST00000368311 SAFBQ15424 915 aaKnown RBP eCLIP9.99□□□□□ -0.81
SSR2-202ENST00000368311 RNMTO43148 476 aaKnown RBP9.99□□□□□ -0.81
SSR2-202ENST00000368311 RTKN2Q8IZC4 609 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 RASSF8Q8NHQ8 419 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 R3HCC1Q9Y3T6 440 aaKnown RBP9.99□□□□□ -0.81
SSR2-202ENST00000368311 KDM2BQ8NHM5 1336 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 PARD3Q8TEW0 1356 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 TMPOP42166 694 aaKnown RBP9.99□□□□□ -0.81
SSR2-202ENST00000368311 NCAPD2Q15021 1401 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 METP08581 1390 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 ELL2O00472 640 aaPredicted RBP9.99□□□□□ -0.81
SSR2-202ENST00000368311 TPM4P67936 248 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 DUSP27Q5VZP5 1158 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 ZNF710Q8N1W2 664 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 NECTIN2Q92692 538 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 SLC5A4Q9NY91 659 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 RAI14Q9P0K7 980 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 EMILIN1Q9Y6C2 1016 aa9.99□□□□□ -0.81
SSR2-202ENST00000368311 SLIT1O75093 1534 aa9.98□□□□□ -0.81
SSR2-202ENST00000368311 GCC1Q96CN9 775 aa9.98□□□□□ -0.81
SSR2-202ENST00000368311 MPHOSPH10O00566 681 aaKnown RBP9.98□□□□□ -0.81
SSR2-202ENST00000368311 HSP90AA2PQ14568 343 aaPredicted RBP9.98□□□□□ -0.81
SSR2-202ENST00000368311 USP6P35125 1406 aa9.98□□□□□ -0.81
SSR2-202ENST00000368311 DNAAF4Q8WXU2 420 aa9.98□□□□□ -0.81
SSR2-202ENST00000368311 FYB1O15117 783 aa9.98□□□□□ -0.81
SSR2-202ENST00000368311 ST18O60284 1047 aa9.98□□□□□ -0.81
SSR2-202ENST00000368311 NFXL1Q6ZNB6 911 aa9.98□□□□□ -0.81
SSR2-202ENST00000368311 LRP2BPQ9P2M1 347 aa9.98□□□□□ -0.81
SSR2-202ENST00000368311 SETBP1Q9Y6X0 1596 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 A0A1W2PP64 1363 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 MMP14P50281 582 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 DALRD3Q5D0E6 543 aaKnown RBP9.97□□□□□ -0.81
SSR2-202ENST00000368311 RPAP2Q8IXW5 612 aaPredicted RBP9.97□□□□□ -0.81
SSR2-202ENST00000368311 KIAA0232Q92628 1395 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 IQCA1LA6NCM1 817 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 KIAA2012Q0VF49 1180 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.97□□□□□ -0.81
SSR2-202ENST00000368311 DEPDC5O75140 1603 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 ALKQ9UM73 1620 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 USHBP1Q8N6Y0 703 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 MYD88Q99836 296 aa9.97□□□□□ -0.81
SSR2-202ENST00000368311 RNF41Q9H4P4 317 aaPredicted RBP9.97□□□□□ -0.81
SSR2-202ENST00000368311 CEP152O94986 1710 aa9.96□□□□□ -0.81
SSR2-202ENST00000368311 TBC1D22AQ8WUA7 517 aa9.96□□□□□ -0.81
SSR2-202ENST00000368311 SLC52A2Q9HAB3 445 aa9.96□□□□□ -0.81
SSR2-202ENST00000368311 ROBO2Q9HCK4 1378 aa9.96□□□□□ -0.81
SSR2-202ENST00000368311 HOOK1Q9UJC3 728 aaKnown RBP9.96□□□□□ -0.81
SSR2-202ENST00000368311 ATP6V1DQ9Y5K8 247 aa9.96□□□□□ -0.81
SSR2-202ENST00000368311 PLEKHG2Q9H7P9 1386 aa9.96□□□□□ -0.81
SSR2-202ENST00000368311 APBB1O00213 710 aa9.96□□□□□ -0.82
SSR2-202ENST00000368311 CPLX1O14810 134 aa9.96□□□□□ -0.82
SSR2-202ENST00000368311 TPM2P07951 284 aa9.96□□□□□ -0.82
SSR2-202ENST00000368311 ANKRD13DQ6ZTN6 518 aa9.96□□□□□ -0.82
SSR2-202ENST00000368311 HOMEZQ8IX15 550 aa9.96□□□□□ -0.82
SSR2-202ENST00000368311 NEURL4Q96JN8 1562 aa9.96□□□□□ -0.82
SSR2-202ENST00000368311 USP5P45974 858 aa9.96□□□□□ -0.82
SSR2-202ENST00000368311 VSIG10Q8N0Z9 540 aa9.96□□□□□ -0.82
SSR2-202ENST00000368311 SSFA2P28290 1259 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms