RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 PSME1Q06323 249 aa13.8□□□□□ -0.2
PRKN-206ENST00000366898 FOXO3O43524 673 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 ERLIN1O75477 346 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 PAXBP1Q9Y5B6 917 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 LOC102724159A0A0B4J2E5 919 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 CSB-PGBD3P0DP91 1061 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 MCM6Q14566 821 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 PWP2Q15269 919 aaKnown RBP13.79□□□□□ -0.2
PRKN-206ENST00000366898 AMOTL2Q9Y2J4 779 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 PPIP5K1Q6PFW1 1433 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 E2F4Q16254 413 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 CCDC34Q96HJ3 373 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 CCDC9Q9Y3X0 531 aaKnown RBP13.79□□□□□ -0.2
PRKN-206ENST00000366898 ZNF500O60304 480 aaPredicted RBP13.79□□□□□ -0.2
PRKN-206ENST00000366898 CLIP2Q9UDT6 1046 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 EXOC6BQ9Y2D4 811 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 RIMS2Q9UQ26 1411 aa13.79□□□□□ -0.2
PRKN-206ENST00000366898 SPHKAPQ2M3C7 1700 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 NF2P35240 595 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
PRKN-206ENST00000366898 TEFQ10587 303 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 CKAP2LQ8IYA6 745 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 TET3O43151 1660 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 WDR33Q9C0J8 1336 aaKnown RBP13.78□□□□□ -0.2
PRKN-206ENST00000366898 TSHZ3Q63HK5 1081 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 NEK11Q8NG66 645 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 INSRP06213 1382 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 ABCC11Q96J66 1382 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 VAMP4O75379 141 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 ATP2B3Q16720 1220 aa13.78□□□□□ -0.2
PRKN-206ENST00000366898 RNF187Q5TA31 235 aaPredicted RBP13.77□□□□□ -0.2
PRKN-206ENST00000366898 GIMAP6Q6P9H5 292 aa13.77□□□□□ -0.2
PRKN-206ENST00000366898 GCC1Q96CN9 775 aa13.77□□□□□ -0.2
PRKN-206ENST00000366898 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.2
PRKN-206ENST00000366898 PHACTR2O75167 634 aa13.77□□□□□ -0.21
PRKN-206ENST00000366898 ALDH1L2Q3SY69 923 aa13.77□□□□□ -0.21
PRKN-206ENST00000366898 ESCO1Q5FWF5 840 aa13.77□□□□□ -0.21
PRKN-206ENST00000366898 C16orf71Q8IYS4 520 aaPredicted RBP13.77□□□□□ -0.21
PRKN-206ENST00000366898 MAP2K2P36507 400 aa13.77□□□□□ -0.21
PRKN-206ENST00000366898 CCDC183Q5T5S1 534 aa13.77□□□□□ -0.21
PRKN-206ENST00000366898 NUP62CLQ9H1M0 184 aa13.77□□□□□ -0.21
PRKN-206ENST00000366898 KIF1BO60333 1816 aa13.77□□□□□ -0.21
PRKN-206ENST00000366898 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.21
PRKN-206ENST00000366898 RRP12Q5JTH9 1297 aaKnown RBP13.76□□□□□ -0.21
PRKN-206ENST00000366898 CEP57Q86XR8 500 aa13.76□□□□□ -0.21
PRKN-206ENST00000366898 MYOM2P54296 1465 aa13.76□□□□□ -0.21
PRKN-206ENST00000366898 MPHOSPH10O00566 681 aaKnown RBP13.76□□□□□ -0.21
PRKN-206ENST00000366898 EIF4A2Q14240 407 aaKnown RBP13.76□□□□□ -0.21
PRKN-206ENST00000366898 PPP1R9BQ96SB3 815 aa13.76□□□□□ -0.21
PRKN-206ENST00000366898 ZBTB40Q9NUA8 1239 aa13.76□□□□□ -0.21
PRKN-206ENST00000366898 EFCAB6Q5THR3 1501 aa13.76□□□□□ -0.21
PRKN-206ENST00000366898 MAP3K4Q9Y6R4 1608 aa13.76□□□□□ -0.21
PRKN-206ENST00000366898 RAB3GAP1Q15042 981 aa13.76□□□□□ -0.21
PRKN-206ENST00000366898 PIBF1Q8WXW3 757 aa13.76□□□□□ -0.21
PRKN-206ENST00000366898 ZNF622Q969S3 477 aaKnown RBP eCLIP13.76□□□□□ -0.21
PRKN-206ENST00000366898 LRRCC1Q9C099 1032 aa13.76□□□□□ -0.21
PRKN-206ENST00000366898 TPM1P09493 284 aa13.75□□□□□ -0.21
PRKN-206ENST00000366898 TSR1Q2NL82 804 aaKnown RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 GAS2L2Q8NHY3 880 aa13.75□□□□□ -0.21
PRKN-206ENST00000366898 MAP4K4O95819 1239 aaPredicted RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 DHX8Q14562 1220 aaKnown RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 GBP6Q6ZN66 633 aa13.75□□□□□ -0.21
PRKN-206ENST00000366898 FERMT3Q86UX7 667 aa13.75□□□□□ -0.21
PRKN-206ENST00000366898 UPF3BQ9BZI7 483 aaKnown RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 ZSCAN20P17040 1043 aaPredicted RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 PTGS1P23219 599 aa13.75□□□□□ -0.21
PRKN-206ENST00000366898 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 CAGE1Q8TC20 777 aa13.75□□□□□ -0.21
PRKN-206ENST00000366898 MYCNP04198 464 aaPredicted RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 MAP3K11Q16584 847 aa13.75□□□□□ -0.21
PRKN-206ENST00000366898 ARHGAP29Q52LW3 1261 aa13.75□□□□□ -0.21
PRKN-206ENST00000366898 MRPL50Q8N5N7 158 aaKnown RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 PLEKHF1Q96S99 279 aa13.75□□□□□ -0.21
PRKN-206ENST00000366898 NAT10Q9H0A0 1025 aaKnown RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.75□□□□□ -0.21
PRKN-206ENST00000366898 SHTN1A0MZ66 631 aa13.74□□□□□ -0.21
PRKN-206ENST00000366898 TEX2Q8IWB9 1127 aa13.74□□□□□ -0.21
PRKN-206ENST00000366898 DDX11Q96FC9 970 aa13.74□□□□□ -0.21
PRKN-206ENST00000366898 IL1RAPL2Q9NP60 686 aa13.74□□□□□ -0.21
PRKN-206ENST00000366898 ABCA6Q8N139 1617 aa13.74□□□□□ -0.21
PRKN-206ENST00000366898 IVLP07476 585 aa13.74□□□□□ -0.21
PRKN-206ENST00000366898 KINO60870 393 aaKnown RBP13.74□□□□□ -0.21
PRKN-206ENST00000366898 GBP2P32456 591 aaPredicted RBP13.74□□□□□ -0.21
PRKN-206ENST00000366898 JAKMIP3Q5VZ66 844 aa13.74□□□□□ -0.21
PRKN-206ENST00000366898 MEIS3Q99687 375 aa13.74□□□□□ -0.21
PRKN-206ENST00000366898 RNF17Q9BXT8 1623 aaKnown RBP13.73□□□□□ -0.21
PRKN-206ENST00000366898 SLU7O95391 586 aaKnown RBP13.73□□□□□ -0.21
PRKN-206ENST00000366898 HSPA2P54652 639 aa13.73□□□□□ -0.21
PRKN-206ENST00000366898 HDAC1Q13547 482 aaPredicted RBP13.73□□□□□ -0.21
PRKN-206ENST00000366898 TTC21BQ7Z4L5 1316 aa13.73□□□□□ -0.21
PRKN-206ENST00000366898 KIF2AO00139 706 aaPredicted RBP13.73□□□□□ -0.21
PRKN-206ENST00000366898 LRCH2Q5VUJ6 765 aa13.73□□□□□ -0.21
PRKN-206ENST00000366898 TMEM51Q9NW97 253 aa13.73□□□□□ -0.21
PRKN-206ENST00000366898 CPSF2Q9P2I0 782 aaKnown RBP13.73□□□□□ -0.21
PRKN-206ENST00000366898 SMTNL1A8MU46 457 aa13.73□□□□□ -0.21
PRKN-206ENST00000366898 PPP2R5AQ15172 486 aa13.73□□□□□ -0.21
PRKN-206ENST00000366898 ZSCAN26Q16670 478 aa13.73□□□□□ -0.21
PRKN-206ENST00000366898 TBC1D9Q6ZT07 1266 aa13.73□□□□□ -0.21
PRKN-206ENST00000366898 PUS7Q96PZ0 661 aaKnown RBP13.73□□□□□ -0.21
PRKN-206ENST00000366898 IL16Q14005 1332 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms