RNA–Protein interactions for RNA: ENST00000360540.9

PCMTD1-201, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCMTD1, Length 4,252 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD1-201ENST00000360540 HAND2P61296 217 aa16.7■□□□□ 0.26
PCMTD1-201ENST00000360540 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
PCMTD1-201ENST00000360540 ZMYM4Q5VZL5 1548 aa16.7■□□□□ 0.26
PCMTD1-201ENST00000360540 EIF2AK4Q9P2K8 1649 aaKnown RBP16.7■□□□□ 0.26
PCMTD1-201ENST00000360540 GOLIM4O00461 696 aa16.7■□□□□ 0.26
PCMTD1-201ENST00000360540 NUP62CLQ9H1M0 184 aa16.7■□□□□ 0.26
PCMTD1-201ENST00000360540 BRPF1P55201 1214 aaPredicted RBP16.69■□□□□ 0.26
PCMTD1-201ENST00000360540 METTL24Q5JXM2 366 aa16.69■□□□□ 0.26
PCMTD1-201ENST00000360540 NOL10Q9BSC4 688 aaKnown RBP16.69■□□□□ 0.26
PCMTD1-201ENST00000360540 BLMP54132 1417 aaPredicted RBP16.69■□□□□ 0.26
PCMTD1-201ENST00000360540 IFIT1P09914 478 aaKnown RBP16.69■□□□□ 0.26
PCMTD1-201ENST00000360540 XAGE3Q8WTP9 111 aa16.69■□□□□ 0.26
PCMTD1-201ENST00000360540 ESYT1Q9BSJ8 1104 aa16.68■□□□□ 0.26
PCMTD1-201ENST00000360540 ABCC1P33527 1531 aa16.68■□□□□ 0.26
PCMTD1-201ENST00000360540 ZSCAN31Q96LW9 406 aaPredicted RBP16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 HYPKQ9NX55 129 aa16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 NPC1L1Q9UHC9 1359 aa16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 GJB2P29033 226 aa16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 PIK3R4Q99570 1358 aa16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 ZSCAN30Q86W11 494 aa16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 PPP6R1Q9UPN7 881 aa16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 MAST1Q9Y2H9 1570 aa16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 FAM177A1Q8N128 213 aaPredicted RBP16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 NFATC2IPQ8NCF5 419 aa16.67■□□□□ 0.26
PCMTD1-201ENST00000360540 PLA2R1Q13018 1463 aa16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 ATP7AQ04656 1500 aa16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 ADAMTS2O95450 1211 aa16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 TSR1Q2NL82 804 aaKnown RBP16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 ZMYM3Q14202 1370 aa16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 SART3Q15020 963 aaKnown RBP16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 NCBP3Q53F19 620 aaKnown RBP16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 ANKRD13DQ6ZTN6 518 aa16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 LGR6Q9HBX8 967 aa16.66■□□□□ 0.26
PCMTD1-201ENST00000360540 MSH6P52701 1360 aa16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 STX6O43752 255 aa16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 LETM1O95202 739 aaPredicted RBP16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 KLHDC4Q8TBB5 520 aa16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 PUS7Q96PZ0 661 aaKnown RBP16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 HCLS1P14317 486 aaPredicted RBP16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 AMOTL1Q8IY63 956 aa16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 ZNF396Q96N95 335 aaPredicted RBP16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 TDO2P48775 406 aa16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 PIP4K2BP78356 416 aa16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 NAT10Q9H0A0 1025 aaKnown RBP16.65■□□□□ 0.26
PCMTD1-201ENST00000360540 PNMA6EA0A0J9YXQ4 647 aa16.64■□□□□ 0.25
PCMTD1-201ENST00000360540 TPM1P09493 284 aa16.64■□□□□ 0.25
PCMTD1-201ENST00000360540 GIMAP6Q6P9H5 292 aa16.64■□□□□ 0.25
PCMTD1-201ENST00000360540 TMOD3Q9NYL9 352 aa16.64■□□□□ 0.25
PCMTD1-201ENST00000360540 LRP2BPQ9P2M1 347 aa16.64■□□□□ 0.25
PCMTD1-201ENST00000360540 MAP3K11Q16584 847 aa16.64■□□□□ 0.25
PCMTD1-201ENST00000360540 ZNF830Q96NB3 372 aaPredicted RBP16.64■□□□□ 0.25
PCMTD1-201ENST00000360540 ATP10AO60312 1499 aa16.63■□□□□ 0.25
PCMTD1-201ENST00000360540 KRT32Q14532 448 aa16.63■□□□□ 0.25
PCMTD1-201ENST00000360540 KLHL40Q2TBA0 621 aa16.63■□□□□ 0.25
PCMTD1-201ENST00000360540 ZSCAN23Q3MJ62 389 aa16.63■□□□□ 0.25
PCMTD1-201ENST00000360540 OLFM4Q6UX06 510 aa16.63■□□□□ 0.25
PCMTD1-201ENST00000360540 CCDC144CPQ8IYA2 1237 aa16.63■□□□□ 0.25
PCMTD1-201ENST00000360540 IFNL2Q8IZJ0 200 aa16.63■□□□□ 0.25
PCMTD1-201ENST00000360540 EVI5LQ96CN4 794 aa16.63■□□□□ 0.25
PCMTD1-201ENST00000360540 CNPY2Q9Y2B0 182 aa16.63■□□□□ 0.25
PCMTD1-201ENST00000360540 HOXC9P31274 260 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 LMBR1LQ6UX01 489 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 ORAI2Q96SN7 254 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 RAI14Q9P0K7 980 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 HOOK1Q9UJC3 728 aaKnown RBP16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 UQCRHLA0A096LP55 91 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 GCP02774 474 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 UQCRHP07919 91 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 FLT4P35916 1363 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 KDM5CP41229 1560 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 MINDY4BA8MYZ0 360 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 GRM8O00222 908 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 USP26Q9BXU7 913 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 ZNF521Q96K83 1311 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 NOC3LQ8WTT2 800 aaKnown RBP16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 BRF1Q92994 677 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 CHAMP1Q96JM3 812 aa16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 TRMT112Q9UI30 125 aaKnown RBP16.62■□□□□ 0.25
PCMTD1-201ENST00000360540 CHL1O00533 1208 aa16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 IFIT5Q13325 482 aaKnown RBP16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 AIDAQ96BJ3 306 aa16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 RBM8AQ9Y5S9 174 aaKnown RBP16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 SERPINC1P01008 464 aa16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 STARD3NLO95772 234 aa16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 PRIM1P49642 420 aaKnown RBP16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 CHST3Q7LGC8 479 aa16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 CFAP45Q9UL16 551 aa16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 U3KPZ7 1027 aaPredicted RBP16.61■□□□□ 0.25
PCMTD1-201ENST00000360540 NBPF7P0C2Y1 421 aaPredicted RBP16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 IMMTQ16891 758 aaKnown RBP16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 MEX3CQ5U5Q3 659 aaKnown RBP16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 ISM2Q6H9L7 571 aa16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 NDUFB9Q9Y6M9 179 aa16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 CCDC69A6NI79 296 aa16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 HSP90AB3PQ58FF7 597 aa16.6■□□□□ 0.25
PCMTD1-201ENST00000360540 MNS1Q8NEH6 495 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms