RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 MAP4K4O95819 1239 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-202ENST00000356435 MAP3K12Q12852 859 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 CCDC148Q8NFR7 591 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 PIBF1Q8WXW3 757 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 ZNF644Q9H582 1327 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-202ENST00000356435 CCDC141Q6ZP82 1450 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 BAG4O95429 457 aaKnown RBP6.44□□□□□ -1.38
PTPRD-202ENST00000356435 AMOTQ4VCS5 1084 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 UBA5Q9GZZ9 404 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 GRPEL1Q9HAV7 217 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 HLA-DOAP06340 250 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 U3KPZ7 1027 aaPredicted RBP6.44□□□□□ -1.38
PTPRD-202ENST00000356435 TRAK2O60296 914 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 PRPF40AO75400 957 aaKnown RBP6.44□□□□□ -1.38
PTPRD-202ENST00000356435 STXBP4Q6ZWJ1 553 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 SSX2IPQ9Y2D8 614 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 PIK3C2GO75747 1445 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 GOLGA6L10A0A0M3HER8 536 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 GSTO1P78417 241 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 CETN1Q12798 172 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 NGLY1Q96IV0 654 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 ADAMTS8Q9UP79 889 aa6.44□□□□□ -1.38
PTPRD-202ENST00000356435 LRRC45Q96CN5 670 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 BCL11BQ9C0K0 894 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 CABP5Q9NP86 173 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 NKTRP30414 1462 aaKnown RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 KIF21AQ7Z4S6 1674 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 JAKMIP1Q96N16 626 aaKnown RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 UPF3BQ9BZI7 483 aaKnown RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 IBTKQ9P2D0 1353 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 SLFN5Q08AF3 891 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 TBC1D32Q96NH3 1257 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 FAM135AQ9P2D6 1515 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 SPTY2D1Q68D10 685 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 HOOK3Q86VS8 718 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 ANKRD18BA2A2Z9 1011 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 IFIT5Q13325 482 aaKnown RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 ARHGAP29Q52LW3 1261 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 PPP4R3BQ5MIZ7 849 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 NAPBQ9H115 298 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 CCDC194A0A1B0GVG4 234 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 LARP1Q6PKG0 1096 aaKnown RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 TSR2Q969E8 191 aaKnown RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 CCDC85AQ96PX6 553 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 NF2P35240 595 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 WDR63Q8IWG1 891 aa6.43□□□□□ -1.38
PTPRD-202ENST00000356435 ZNF444Q8N0Y2 327 aaPredicted RBP6.43□□□□□ -1.38
PTPRD-202ENST00000356435 FAM193AP78312 1265 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 MRPS9P82933 396 aaKnown RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 TSNARE1Q96NA8 513 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 PDZRN3Q9UPQ7 1066 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 DENND4BO75064 1496 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 TRMT112Q9UI30 125 aaKnown RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 RAB11FIP3O75154 756 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 CWC27Q6UX04 472 aaKnown RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 ADAMTS2O95450 1211 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 LIG1P18858 919 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 CTNNA2P26232 953 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 DUSP27Q5VZP5 1158 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 CDCA7LQ96GN5 454 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 SLC12A7Q9Y666 1083 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 TTF1Q15361 905 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 ZNF428Q96B54 188 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 TEX13AQ9BXU3 409 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 HDAC9Q9UKV0 1011 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 FCHSD2O94868 740 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 LDHCP07864 332 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 KIF5BP33176 963 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 NUP62CLQ9H1M0 184 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 LRRFIP2Q9Y608 721 aaKnown RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 PZPP20742 1482 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 COL17A1Q9UMD9 1497 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 PER1O15534 1290 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 ZC3H6P61129 1189 aaKnown RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 IQCA1Q86XH1 822 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 SPC24Q8NBT2 197 aa6.42□□□□□ -1.38
PTPRD-202ENST00000356435 ZNF219Q9P2Y4 722 aaPredicted RBP6.42□□□□□ -1.38
PTPRD-202ENST00000356435 GCOM1H8Y6P7 765 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 MYZAPP0CAP1 466 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 FERP16591 822 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 PPM1EQ8WY54 764 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 BAG3O95817 575 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 CASTP20810 708 aaKnown RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 CDC5LQ99459 802 aaKnown RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 MINDY4BA8MYZ0 360 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 GSTTP1A0A1W2PQM5 241 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 RRS1Q15050 365 aaKnown RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 CATIPQ7Z7H3 387 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 CTNNBL1Q8WYA6 563 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 K7ELQ4 463 aaPredicted RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 HMGB1P09429 215 aaKnown RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 DDX46Q7L014 1031 aaKnown RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 CACNA2D4Q7Z3S7 1137 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 B4DLN1 442 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 C6orf229H3BNL8 230 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 RANBP6O60518 1105 aaKnown RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 MRPL12P52815 198 aaKnown RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 PDE4BQ07343 736 aa6.41□□□□□ -1.38
PTPRD-202ENST00000356435 SMC1AQ14683 1233 aaKnown RBP6.41□□□□□ -1.38
PTPRD-202ENST00000356435 ERMNQ8TAM6 284 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms