RNA–Protein interactions for RNA: ENST00000353278.8

SLC6A20-201, Transcript of solute carrier family 6 member 20, humanhuman

TSL 1 (best) BASIC

Gene SLC6A20, Length 5,247 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-201ENST00000353278 PRPF40AO75400 957 aaKnown RBP13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 RNF214Q8ND24 703 aa13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 NLRP3Q96P20 1036 aa13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 DEF6Q9H4E7 631 aa13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 MAP3K2Q9Y2U5 619 aa13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 ZNF518AQ6AHZ1 1483 aa13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 ATP5J2-PTCD1G3V325 749 aa13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 SERPINC1P01008 464 aa13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 UBE3BQ7Z3V4 1068 aa13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 CEP57L1Q8IYX8 460 aa13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 CCDC8Q9H0W5 538 aaPredicted RBP13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 LRRFIP2Q9Y608 721 aaKnown RBP13.17□□□□□ -0.3
SLC6A20-201ENST00000353278 PPP1R12BO60237 982 aaPredicted RBP13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 DHX8Q14562 1220 aaKnown RBP13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 OGFOD1Q8N543 542 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 RAB34Q9BZG1 259 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 RIMS2Q9UQ26 1411 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 ZNF213O14771 459 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 PPFIBP1Q86W92 1011 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 ANKRD36BQ8N2N9 1353 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 CCP110O43303 1012 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 IL2RBP14784 551 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 CAVIN1Q6NZI2 390 aaKnown RBP13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 TMEM87AQ8NBN3 555 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 ANKRD13DQ6ZTN6 518 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 TFCP2L1Q9NZI6 479 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 PIK3R4Q99570 1358 aa13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 K7ELQ4 463 aaPredicted RBP13.16□□□□□ -0.3
SLC6A20-201ENST00000353278 GSTO1P78417 241 aa13.15□□□□□ -0.3
SLC6A20-201ENST00000353278 ANKRD18AQ8IVF6 992 aa13.15□□□□□ -0.3
SLC6A20-201ENST00000353278 TNMDQ9H2S6 317 aa13.15□□□□□ -0.3
SLC6A20-201ENST00000353278 CLEC11AQ9Y240 323 aa13.15□□□□□ -0.3
SLC6A20-201ENST00000353278 HMGB1P09429 215 aaKnown RBP13.15□□□□□ -0.3
SLC6A20-201ENST00000353278 CASTP20810 708 aaKnown RBP13.15□□□□□ -0.3
SLC6A20-201ENST00000353278 SPATA32Q96LK8 384 aa13.15□□□□□ -0.3
SLC6A20-201ENST00000353278 HSP90B2PQ58FF3 399 aa13.15□□□□□ -0.31
SLC6A20-201ENST00000353278 WDR7Q9Y4E6 1490 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 UQCRFS1P1P0C7P4 283 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 CCDC192P0DO97 292 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 SETQ01105 290 aaPredicted RBP13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 MPHOSPH6Q99547 160 aaKnown RBP13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 TSPY26PQ9H489 355 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 PDE4BQ07343 736 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 NOM1Q5C9Z4 860 aaKnown RBP13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 RTCBQ9Y3I0 505 aaKnown RBP13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 SLC12A7Q9Y666 1083 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 NEBLO76041 1014 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 CATIPQ7Z7H3 387 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 PARP3Q9Y6F1 533 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
SLC6A20-201ENST00000353278 PI4KAP2A4QPH2 592 aa13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 POTEJP0CG39 1038 aa13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 NF2P35240 595 aa13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 C16orf71Q8IYS4 520 aaPredicted RBP13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 PI4KAP1Q8N8J0 262 aa13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 IFIT3O14879 490 aaKnown RBP13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 NASPP49321 788 aaPredicted RBP13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 TMEM266Q2M3C6 531 aa13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 DDX11Q96FC9 970 aa13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 NYXQ9GZU5 481 aa13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 RARSP54136 660 aaKnown RBP13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 PRPF40BQ6NWY9 871 aaKnown RBP13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 ZGPATQ8N5A5 531 aaKnown RBP13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 PHAXQ9H814 394 aaKnown RBP13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 CCDC12Q8WUD4 166 aaPredicted RBP13.13□□□□□ -0.31
SLC6A20-201ENST00000353278 JDP2Q8WYK2 163 aa13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 CCDC39Q9UFE4 941 aa13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 CCDC194A0A1B0GVG4 234 aa13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 TPTE2Q6XPS3 522 aa13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 SEPT11Q9NVA2 429 aaKnown RBP13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 KIF5BP33176 963 aa13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 TEX35Q5T0J7 233 aa13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 ECHDC1Q9NTX5 307 aa13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 NIP7Q9Y221 180 aaKnown RBP eCLIP13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 MAP3K1Q13233 1512 aa13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 CABLES1Q8TDN4 633 aa13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 ERCC4Q92889 916 aaPredicted RBP13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 CRNKL1Q9BZJ0 848 aaKnown RBP13.12□□□□□ -0.31
SLC6A20-201ENST00000353278 TSPY2A6NKD2 308 aa13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 AKAP4Q5JQC9 854 aa13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 GPATCH8Q9UKJ3 1502 aaKnown RBP13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 CBFA2T2O43439 604 aa13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 TRAK2O60296 914 aa13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 SMARCA5O60264 1052 aaPredicted RBP13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 ERLIN2O94905 339 aa13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 TRAF1Q13077 416 aa13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 PPP4R3BQ5MIZ7 849 aa13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 ATP10BO94823 1461 aa13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 MRE11P49959 708 aa13.11□□□□□ -0.31
SLC6A20-201ENST00000353278 CDCA7Q9BWT1 371 aaPredicted RBP13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 GOLIM4O00461 696 aa13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 BAG4O95429 457 aaKnown RBP13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 SNRKQ9NRH2 765 aa13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 GOLGA8AA7E2F4 631 aa13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 GOLGA8BA8MQT2 603 aa13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 PATL2C9JE40 543 aaKnown RBP13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 PPIP5K1Q6PFW1 1433 aa13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 GRM1Q13255 1194 aa13.1□□□□□ -0.31
SLC6A20-201ENST00000353278 EVI5LQ96CN4 794 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 234.1 ms