RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 KSR2Q6VAB6 950 aa17.5■□□□□ 0.39
CDK5RAP1-202ENST00000346416 TBC1D9Q6ZT07 1266 aa17.5■□□□□ 0.39
CDK5RAP1-202ENST00000346416 ZNF496Q96IT1 587 aaPredicted RBP17.5■□□□□ 0.39
CDK5RAP1-202ENST00000346416 MAP3K2Q9Y2U5 619 aa17.5■□□□□ 0.39
CDK5RAP1-202ENST00000346416 BECN1Q14457 450 aa17.5■□□□□ 0.39
CDK5RAP1-202ENST00000346416 PDIA6Q15084 440 aa17.5■□□□□ 0.39
CDK5RAP1-202ENST00000346416 TTC5Q8N0Z6 440 aa17.5■□□□□ 0.39
CDK5RAP1-202ENST00000346416 PARP4Q9UKK3 1724 aaKnown RBP17.5■□□□□ 0.39
CDK5RAP1-202ENST00000346416 CABP4P57796 275 aa17.49■□□□□ 0.39
CDK5RAP1-202ENST00000346416 ZCRB1Q8TBF4 217 aaKnown RBP17.49■□□□□ 0.39
CDK5RAP1-202ENST00000346416 CARD10Q9BWT7 1032 aa17.49■□□□□ 0.39
CDK5RAP1-202ENST00000346416 STRN4Q9NRL3 753 aa17.49■□□□□ 0.39
CDK5RAP1-202ENST00000346416 C5P01031 1676 aa17.49■□□□□ 0.39
CDK5RAP1-202ENST00000346416 CDC45O75419 566 aa17.48■□□□□ 0.39
CDK5RAP1-202ENST00000346416 PCDH11XQ9BZA7 1347 aa17.48■□□□□ 0.39
CDK5RAP1-202ENST00000346416 PCDH11YQ9BZA8 1340 aa17.48■□□□□ 0.39
CDK5RAP1-202ENST00000346416 EVA1CP58658 441 aa17.48■□□□□ 0.39
CDK5RAP1-202ENST00000346416 LARP1Q6PKG0 1096 aaKnown RBP17.48■□□□□ 0.39
CDK5RAP1-202ENST00000346416 SSH3Q8TE77 659 aa17.48■□□□□ 0.39
CDK5RAP1-202ENST00000346416 LRRCC1Q9C099 1032 aa17.48■□□□□ 0.39
CDK5RAP1-202ENST00000346416 IBTKQ9P2D0 1353 aaPredicted RBP17.48■□□□□ 0.39
CDK5RAP1-202ENST00000346416 IL2RBP14784 551 aa17.47■□□□□ 0.39
CDK5RAP1-202ENST00000346416 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
CDK5RAP1-202ENST00000346416 DDX58O95786 925 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP1-202ENST00000346416 SNRPA1P09661 255 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP1-202ENST00000346416 AIMP1Q12904 312 aaKnown RBP17.47■□□□□ 0.39
CDK5RAP1-202ENST00000346416 ALDH1L1O75891 902 aa17.46■□□□□ 0.39
CDK5RAP1-202ENST00000346416 RBM25P49756 843 aaKnown RBP17.46■□□□□ 0.39
CDK5RAP1-202ENST00000346416 FMNL2Q96PY5 1086 aa17.46■□□□□ 0.39
CDK5RAP1-202ENST00000346416 MYL6BP14649 208 aa17.45■□□□□ 0.38
CDK5RAP1-202ENST00000346416 OSBPL3Q9H4L5 887 aa17.45■□□□□ 0.38
CDK5RAP1-202ENST00000346416 USP16Q9Y5T5 823 aa17.45■□□□□ 0.38
CDK5RAP1-202ENST00000346416 SRGAP3O43295 1099 aa17.45■□□□□ 0.38
CDK5RAP1-202ENST00000346416 PDE1AP54750 535 aa17.45■□□□□ 0.38
CDK5RAP1-202ENST00000346416 POLA2Q14181 598 aa17.45■□□□□ 0.38
CDK5RAP1-202ENST00000346416 CWF19L2Q2TBE0 894 aaKnown RBP17.45■□□□□ 0.38
CDK5RAP1-202ENST00000346416 SDSP20132 328 aa17.44■□□□□ 0.38
CDK5RAP1-202ENST00000346416 TBC1D2Q9BYX2 928 aa17.44■□□□□ 0.38
CDK5RAP1-202ENST00000346416 C9orf78Q9NZ63 289 aaPredicted RBP17.44■□□□□ 0.38
CDK5RAP1-202ENST00000346416 LINS1Q8NG48 757 aa17.44■□□□□ 0.38
CDK5RAP1-202ENST00000346416 SALL3Q9BXA9 1300 aa17.43■□□□□ 0.38
CDK5RAP1-202ENST00000346416 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
CDK5RAP1-202ENST00000346416 SURF6O75683 361 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP1-202ENST00000346416 NKX1-1Q15270 411 aaPredicted RBP17.42■□□□□ 0.38
CDK5RAP1-202ENST00000346416 RIC3Q7Z5B4 369 aa17.42■□□□□ 0.38
CDK5RAP1-202ENST00000346416 DDX54Q8TDD1 881 aaKnown RBP17.42■□□□□ 0.38
CDK5RAP1-202ENST00000346416 XAGE3Q8WTP9 111 aa17.42■□□□□ 0.38
CDK5RAP1-202ENST00000346416 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
CDK5RAP1-202ENST00000346416 USP35Q9P2H5 1018 aa17.42■□□□□ 0.38
CDK5RAP1-202ENST00000346416 BTG4Q9NY30 223 aa17.41■□□□□ 0.38
CDK5RAP1-202ENST00000346416 ROBO1Q9Y6N7 1651 aa17.41■□□□□ 0.38
CDK5RAP1-202ENST00000346416 RAB11FIP3O75154 756 aa17.41■□□□□ 0.38
CDK5RAP1-202ENST00000346416 MX1P20591 662 aa17.41■□□□□ 0.38
CDK5RAP1-202ENST00000346416 LRP10Q7Z4F1 713 aa17.41■□□□□ 0.38
CDK5RAP1-202ENST00000346416 PIP4K2AP48426 406 aaPredicted RBP17.4■□□□□ 0.38
CDK5RAP1-202ENST00000346416 MTX1Q13505 466 aa17.4■□□□□ 0.38
CDK5RAP1-202ENST00000346416 TSHZ3Q63HK5 1081 aa17.4■□□□□ 0.38
CDK5RAP1-202ENST00000346416 HDAC5Q9UQL6 1122 aa17.4■□□□□ 0.38
CDK5RAP1-202ENST00000346416 SHANK3Q9BYB0 1731 aa17.4■□□□□ 0.38
CDK5RAP1-202ENST00000346416 GRM8O00222 908 aa17.39■□□□□ 0.38
CDK5RAP1-202ENST00000346416 EIF5BO60841 1220 aaKnown RBP17.39■□□□□ 0.38
CDK5RAP1-202ENST00000346416 IGKV5-2P06315 115 aa17.39■□□□□ 0.38
CDK5RAP1-202ENST00000346416 IL1RAPL2Q9NP60 686 aa17.39■□□□□ 0.38
CDK5RAP1-202ENST00000346416 GLI3P10071 1580 aa17.39■□□□□ 0.37
CDK5RAP1-202ENST00000346416 NEXNQ0ZGT2 675 aa17.39■□□□□ 0.37
CDK5RAP1-202ENST00000346416 UTYO14607 1347 aa17.38■□□□□ 0.37
CDK5RAP1-202ENST00000346416 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
CDK5RAP1-202ENST00000346416 CASC1Q6TDU7 716 aa17.38■□□□□ 0.37
CDK5RAP1-202ENST00000346416 ANKRD13DQ6ZTN6 518 aa17.38■□□□□ 0.37
CDK5RAP1-202ENST00000346416 RHPN1Q8TCX5 695 aa17.38■□□□□ 0.37
CDK5RAP1-202ENST00000346416 STAP2Q9UGK3 403 aa17.38■□□□□ 0.37
CDK5RAP1-202ENST00000346416 KIF1BPQ96EK5 621 aa17.37■□□□□ 0.37
CDK5RAP1-202ENST00000346416 KIF2CQ99661 725 aa17.37■□□□□ 0.37
CDK5RAP1-202ENST00000346416 METTL22Q9BUU2 404 aaPredicted RBP17.37■□□□□ 0.37
CDK5RAP1-202ENST00000346416 LAMB4A4D0S4 1761 aa17.36■□□□□ 0.37
CDK5RAP1-202ENST00000346416 NEURL1BA8MQ27 555 aa17.36■□□□□ 0.37
CDK5RAP1-202ENST00000346416 HSP90AB4PQ58FF6 505 aa17.36■□□□□ 0.37
CDK5RAP1-202ENST00000346416 MYD88Q99836 296 aa17.36■□□□□ 0.37
CDK5RAP1-202ENST00000346416 SLKQ9H2G2 1235 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP1-202ENST00000346416 AHDC1Q5TGY3 1603 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP1-202ENST00000346416 KAZALD1Q96I82 304 aa17.36■□□□□ 0.37
CDK5RAP1-202ENST00000346416 SUCLG2Q96I99 432 aa17.36■□□□□ 0.37
CDK5RAP1-202ENST00000346416 UBR2Q8IWV8 1755 aa17.36■□□□□ 0.37
CDK5RAP1-202ENST00000346416 GCKRQ14397 625 aa17.35■□□□□ 0.37
CDK5RAP1-202ENST00000346416 COL14A1Q05707 1796 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP1-202ENST00000346416 PTCD1O75127 700 aaKnown RBP17.35■□□□□ 0.37
CDK5RAP1-202ENST00000346416 NUTM1Q86Y26 1132 aa17.35■□□□□ 0.37
CDK5RAP1-202ENST00000346416 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
CDK5RAP1-202ENST00000346416 KCPQ6ZWJ8 1503 aa17.34■□□□□ 0.37
CDK5RAP1-202ENST00000346416 NFKBIBQ15653 356 aa17.34■□□□□ 0.37
CDK5RAP1-202ENST00000346416 HSCBQ8IWL3 235 aa17.34■□□□□ 0.37
CDK5RAP1-202ENST00000346416 BICC1Q9H694 974 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP1-202ENST00000346416 LTBP4Q8N2S1 1624 aa17.34■□□□□ 0.37
CDK5RAP1-202ENST00000346416 AOX1Q06278 1338 aa17.34■□□□□ 0.37
CDK5RAP1-202ENST00000346416 ERBB4Q15303 1308 aa17.34■□□□□ 0.37
CDK5RAP1-202ENST00000346416 NBPF26B4DH59 902 aa17.33■□□□□ 0.37
CDK5RAP1-202ENST00000346416 OS9Q13438 667 aaPredicted RBP17.33■□□□□ 0.37
CDK5RAP1-202ENST00000346416 NBPF14Q5TI25 921 aa17.33■□□□□ 0.37
CDK5RAP1-202ENST00000346416 NBPF10Q6P3W6 841 aaKnown RBP17.33■□□□□ 0.37
CDK5RAP1-202ENST00000346416 NBPF15Q8N660 670 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms