RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 CLASRPQ8N2M8 674 aaKnown RBP11.81□□□□□ -0.52
MSL3-202ENST00000337339 DIAPH3Q9NSV4 1193 aa11.81□□□□□ -0.52
MSL3-202ENST00000337339 CHMP3Q9Y3E7 222 aa11.81□□□□□ -0.52
MSL3-202ENST00000337339 SOS1Q07889 1333 aaPredicted RBP11.81□□□□□ -0.52
MSL3-202ENST00000337339 SETD1AO15047 1707 aaKnown RBP11.81□□□□□ -0.52
MSL3-202ENST00000337339 RIMS1Q86UR5 1692 aaKnown RBP11.81□□□□□ -0.52
MSL3-202ENST00000337339 GDPD2Q9HCC8 539 aa11.8□□□□□ -0.52
MSL3-202ENST00000337339 DBF4Q9UBU7 674 aaPredicted RBP11.8□□□□□ -0.52
MSL3-202ENST00000337339 SSH2Q76I76 1423 aa11.8□□□□□ -0.52
MSL3-202ENST00000337339 UBR1Q8IWV7 1749 aa11.8□□□□□ -0.52
MSL3-202ENST00000337339 TULP1O00294 542 aaPredicted RBP11.8□□□□□ -0.52
MSL3-202ENST00000337339 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
MSL3-202ENST00000337339 KIF1BPQ96EK5 621 aa11.8□□□□□ -0.52
MSL3-202ENST00000337339 RBM27Q9P2N5 1060 aaKnown RBP11.8□□□□□ -0.52
MSL3-202ENST00000337339 KLHDC4Q8TBB5 520 aa11.8□□□□□ -0.52
MSL3-202ENST00000337339 CCDC8Q9H0W5 538 aaPredicted RBP11.8□□□□□ -0.52
MSL3-202ENST00000337339 C3P01024 1663 aa11.79□□□□□ -0.52
MSL3-202ENST00000337339 RNMTO43148 476 aaKnown RBP11.79□□□□□ -0.52
MSL3-202ENST00000337339 CPA1P15085 419 aa11.79□□□□□ -0.52
MSL3-202ENST00000337339 ATF3P18847 181 aa11.79□□□□□ -0.52
MSL3-202ENST00000337339 AACSQ86V21 672 aa11.79□□□□□ -0.52
MSL3-202ENST00000337339 NFATC2IPQ8NCF5 419 aa11.79□□□□□ -0.52
MSL3-202ENST00000337339 NAP1L5Q96NT1 182 aaPredicted RBP11.79□□□□□ -0.52
MSL3-202ENST00000337339 DIP2AQ14689 1571 aa11.79□□□□□ -0.52
MSL3-202ENST00000337339 CNTROBQ8N137 903 aa11.79□□□□□ -0.52
MSL3-202ENST00000337339 IL25Q9H293 177 aa11.79□□□□□ -0.52
MSL3-202ENST00000337339 RRAGDQ9NQL2 400 aaPredicted RBP11.79□□□□□ -0.52
MSL3-202ENST00000337339 DDIT3P35638 169 aa11.78□□□□□ -0.52
MSL3-202ENST00000337339 PEAK1Q9H792 1746 aa11.78□□□□□ -0.52
MSL3-202ENST00000337339 G3BP1Q13283 466 aaKnown RBP eCLIP11.78□□□□□ -0.52
MSL3-202ENST00000337339 AMOTQ4VCS5 1084 aa11.78□□□□□ -0.52
MSL3-202ENST00000337339 BEND3Q5T5X7 828 aa11.78□□□□□ -0.52
MSL3-202ENST00000337339 RNF214Q8ND24 703 aa11.78□□□□□ -0.52
MSL3-202ENST00000337339 MON2Q7Z3U7 1717 aa11.78□□□□□ -0.52
MSL3-202ENST00000337339 VIRMAQ69YN4 1812 aaKnown RBP11.78□□□□□ -0.52
MSL3-202ENST00000337339 TTC5Q8N0Z6 440 aa11.77□□□□□ -0.52
MSL3-202ENST00000337339 IBTKQ9P2D0 1353 aaPredicted RBP11.77□□□□□ -0.52
MSL3-202ENST00000337339 FAM43AQ8N2R8 423 aa11.77□□□□□ -0.53
MSL3-202ENST00000337339 SSH3Q8TE77 659 aa11.77□□□□□ -0.53
MSL3-202ENST00000337339 A0A0G2JS52 829 aa11.77□□□□□ -0.53
MSL3-202ENST00000337339 NASPP49321 788 aaPredicted RBP11.77□□□□□ -0.53
MSL3-202ENST00000337339 OSBPL3Q9H4L5 887 aa11.77□□□□□ -0.53
MSL3-202ENST00000337339 CWC22Q9HCG8 908 aaKnown RBP11.77□□□□□ -0.53
MSL3-202ENST00000337339 DDX58O95786 925 aaKnown RBP11.76□□□□□ -0.53
MSL3-202ENST00000337339 NEXNQ0ZGT2 675 aa11.76□□□□□ -0.53
MSL3-202ENST00000337339 ARHGEF25Q86VW2 580 aa11.76□□□□□ -0.53
MSL3-202ENST00000337339 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
MSL3-202ENST00000337339 FSD2A1L4K1 749 aa11.76□□□□□ -0.53
MSL3-202ENST00000337339 ATP5J2-PTCD1G3V325 749 aa11.76□□□□□ -0.53
MSL3-202ENST00000337339 PTCD1O75127 700 aaKnown RBP11.76□□□□□ -0.53
MSL3-202ENST00000337339 RAB11FIP3O75154 756 aa11.76□□□□□ -0.53
MSL3-202ENST00000337339 GIGYF1O75420 1035 aaPredicted RBP11.76□□□□□ -0.53
MSL3-202ENST00000337339 CHMP4AQ9BY43 222 aa11.76□□□□□ -0.53
MSL3-202ENST00000337339 PTMSP20962 102 aa11.76□□□□□ -0.53
MSL3-202ENST00000337339 KIF13AQ9H1H9 1805 aa11.75□□□□□ -0.53
MSL3-202ENST00000337339 HSP90AB4PQ58FF6 505 aa11.75□□□□□ -0.53
MSL3-202ENST00000337339 GPATCH3Q96I76 525 aa11.75□□□□□ -0.53
MSL3-202ENST00000337339 MYD88Q99836 296 aa11.75□□□□□ -0.53
MSL3-202ENST00000337339 TATP17735 454 aaPredicted RBP11.75□□□□□ -0.53
MSL3-202ENST00000337339 PRPF40BQ6NWY9 871 aaKnown RBP11.75□□□□□ -0.53
MSL3-202ENST00000337339 KSR2Q6VAB6 950 aa11.75□□□□□ -0.53
MSL3-202ENST00000337339 COPS6Q7L5N1 327 aa11.75□□□□□ -0.53
MSL3-202ENST00000337339 CASTP20810 708 aaKnown RBP11.74□□□□□ -0.53
MSL3-202ENST00000337339 PLCB2Q00722 1185 aa11.74□□□□□ -0.53
MSL3-202ENST00000337339 TCEANC2Q96MN5 208 aa11.74□□□□□ -0.53
MSL3-202ENST00000337339 SYCE3A1L190 88 aa11.74□□□□□ -0.53
MSL3-202ENST00000337339 KLHL40Q2TBA0 621 aa11.74□□□□□ -0.53
MSL3-202ENST00000337339 XAGE3Q8WTP9 111 aa11.74□□□□□ -0.53
MSL3-202ENST00000337339 TAOK2Q9UL54 1235 aa11.74□□□□□ -0.53
MSL3-202ENST00000337339 KNDC1Q76NI1 1749 aa11.74□□□□□ -0.53
MSL3-202ENST00000337339 RGPD8O14715 1765 aaPredicted RBP11.74□□□□□ -0.53
MSL3-202ENST00000337339 MPNDQ8N594 471 aa11.74□□□□□ -0.53
MSL3-202ENST00000337339 BICC1Q9H694 974 aaKnown RBP11.74□□□□□ -0.53
MSL3-202ENST00000337339 NDUFB9Q9Y6M9 179 aa11.74□□□□□ -0.53
MSL3-202ENST00000337339 FSD1Q9BTV5 496 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 AKAP12Q02952 1782 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 GRM8O00222 908 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 GLRX3O76003 335 aaKnown RBP11.73□□□□□ -0.53
MSL3-202ENST00000337339 RASEFQ8IZ41 740 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 SUCLG2Q96I99 432 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 JAKMIP1Q96N16 626 aaKnown RBP11.73□□□□□ -0.53
MSL3-202ENST00000337339 NCOA3Q9Y6Q9 1424 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 HSPA2P54652 639 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 ECHDC1Q9NTX5 307 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 LMBRD1Q9NUN5 540 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 BABAM1Q9NWV8 329 aa11.73□□□□□ -0.53
MSL3-202ENST00000337339 ANKARQ7Z5J8 1434 aa11.72□□□□□ -0.53
MSL3-202ENST00000337339 ZSCAN23Q3MJ62 389 aa11.72□□□□□ -0.53
MSL3-202ENST00000337339 HYPKQ9NX55 129 aa11.72□□□□□ -0.53
MSL3-202ENST00000337339 ZDHHC9Q9Y397 364 aa11.72□□□□□ -0.53
MSL3-202ENST00000337339 MCM2P49736 904 aa11.72□□□□□ -0.53
MSL3-202ENST00000337339 ZNF790Q6PG37 636 aa11.72□□□□□ -0.53
MSL3-202ENST00000337339 EDC3Q96F86 508 aaKnown RBP11.72□□□□□ -0.53
MSL3-202ENST00000337339 ZNF496Q96IT1 587 aaPredicted RBP11.72□□□□□ -0.53
MSL3-202ENST00000337339 DNAJC2Q99543 621 aaKnown RBP11.72□□□□□ -0.53
MSL3-202ENST00000337339 STAP2Q9UGK3 403 aa11.72□□□□□ -0.53
MSL3-202ENST00000337339 NAP1L2Q9ULW6 460 aaPredicted RBP11.72□□□□□ -0.53
MSL3-202ENST00000337339 NSFL1CQ9UNZ2 370 aaKnown RBP11.72□□□□□ -0.53
MSL3-202ENST00000337339 USP16Q9Y5T5 823 aa11.72□□□□□ -0.53
MSL3-202ENST00000337339 VPS37CA5D8V6 355 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms