RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 GSE1Q14687 1217 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 SKIDA1Q1XH10 827 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 PCF11O94913 1555 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 LMOD1P29536 600 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 CA8P35219 290 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 KRT85P78386 507 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 TEX35Q5T0J7 233 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 ATP5J2-PTCD1G3V325 749 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 ZNF213O14771 459 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 PRPF40AO75400 957 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 NEFHP12036 1026 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 ANKRD18AQ8IVF6 992 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 CCDC150Q8NCX0 1101 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 ABCC5O15440 1437 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 BAG4O95429 457 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 SSR1P43307 286 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 TMEM266Q2M3C6 531 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 TMEM57Q8N5G2 664 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 JDP2Q8WYK2 163 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 CCDC97Q96F63 343 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 NYXQ9GZU5 481 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 CCDC8Q9H0W5 538 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 TSPY26PQ9H489 355 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 STK32BQ9NY57 414 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 WDR33Q9C0J8 1336 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 LIG1P18858 919 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 TNMDQ9H2S6 317 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 CCDC39Q9UFE4 941 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 WWC3Q9ULE0 1092 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 RTCBQ9Y3I0 505 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 SLC12A7Q9Y666 1083 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 CASTP20810 708 aaKnown RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 CATIPQ7Z7H3 387 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 NLRP3Q96P20 1036 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 RAB34Q9BZG1 259 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 CFAP45Q9UL16 551 aa8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 ZNF608Q9ULD9 1512 aaPredicted RBP8.1□□□□□ -1.11
GAPVD1-202ENST00000297933 MX1P20591 662 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 PDE4BQ07343 736 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 ERCC4Q92889 916 aaPredicted RBP8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 ABCC11Q96J66 1382 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 TTC21AQ8NDW8 1320 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 HSP90B2PQ58FF3 399 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 VSIG10Q8N0Z9 540 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 RNF214Q8ND24 703 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 SPATA32Q96LK8 384 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 UBA5Q9GZZ9 404 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 F8W031 263 aaPredicted RBP8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 IL2RBP14784 551 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 KDM5BQ9UGL1 1544 aa8.09□□□□□ -1.11
GAPVD1-202ENST00000297933 F6X3S4 739 aa8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 SEPT7Q16181 437 aaKnown RBP8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 SLC4A8Q2Y0W8 1093 aa8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 ALDH1L2Q3SY69 923 aa8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 CCDC181Q5TID7 509 aa8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 CAVIN1Q6NZI2 390 aaKnown RBP8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 ZGPATQ8N5A5 531 aaKnown RBP8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 DDX11Q96FC9 970 aa8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 TSG101Q99816 390 aa8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 C14orf93Q9H972 538 aaKnown RBP8.09□□□□□ -1.12
GAPVD1-202ENST00000297933 NLRP5P59047 1200 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 DHX8Q14562 1220 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 LRRFIP2Q9Y608 721 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 URB2Q14146 1524 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 IFIT3O14879 490 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 CBFA2T2O43439 604 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 SSRP1Q08945 709 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 CRNKL1Q9BZJ0 848 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 C19orf44Q9H6X5 657 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 KAT14Q9H8E8 782 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 NIP7Q9Y221 180 aaKnown RBP eCLIP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 WDR7Q9Y4E6 1490 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 TSPY2A6NKD2 308 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 ZNF804AQ7Z570 1209 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 CCDC12Q8WUD4 166 aaPredicted RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 ZRSR2Q15696 482 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 CABLES1Q8TDN4 633 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 PHAXQ9H814 394 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 VAT1LQ9HCJ6 419 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 RIMS2Q9UQ26 1411 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 CCDC194A0A1B0GVG4 234 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 ANKRD62A6NC57 917 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 SMARCA5O60264 1052 aaPredicted RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 UQCRFS1P1P0C7P4 283 aa8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 PRPF40BQ6NWY9 871 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 UTP14AQ9BVJ6 771 aaKnown RBP8.08□□□□□ -1.12
GAPVD1-202ENST00000297933 VEZTQ9HBM0 779 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 KIF5BP33176 963 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 SAMM50Q9Y512 469 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 GOLGA8AA7E2F4 631 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 GOLGA8BA8MQT2 603 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 HMGB1P09429 215 aaKnown RBP8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 CCDC192P0DO97 292 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 EIF5P55010 431 aaKnown RBP8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 FLIIQ13045 1269 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 UBE3BQ7Z3V4 1068 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 NSD2O96028 1365 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 PTPRCP08575 1304 aa8.07□□□□□ -1.12
GAPVD1-202ENST00000297933 K7ELQ4 463 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms