RNA–Protein interactions for RNA: ENST00000286398.11

SMC2-201, Transcript of structural maintenance of chromosomes 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC2, Length 5,992 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-201ENST00000286398 RAB11FIP3O75154 756 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 FGFR1OPO95684 399 aaKnown RBP10.5□□□□□ -0.73
SMC2-201ENST00000286398 PRPF4BQ13523 1007 aaKnown RBP10.5□□□□□ -0.73
SMC2-201ENST00000286398 TMEM57Q8N5G2 664 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 MIPOL1Q8TD10 442 aa10.5□□□□□ -0.73
SMC2-201ENST00000286398 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMC2-201ENST00000286398 CCDC96Q2M329 555 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 LIMCH1Q9UPQ0 1083 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 BAZ1AQ9NRL2 1556 aaPredicted RBP10.49□□□□□ -0.73
SMC2-201ENST00000286398 ANKRD18BA2A2Z9 1011 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 NLRP6P59044 892 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 ZSCAN23Q3MJ62 389 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 PANK2Q9BZ23 570 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 CTAGE15A4D2H0 777 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 SLU7O95391 586 aaKnown RBP10.49□□□□□ -0.73
SMC2-201ENST00000286398 CTAGE8P0CG41 777 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 SKILP12757 684 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 CCDC184Q52MB2 194 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 CTAGE6Q86UF2 777 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 CTAGE4Q8IX94 777 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 DDX54Q8TDD1 881 aaKnown RBP10.49□□□□□ -0.73
SMC2-201ENST00000286398 DRC1Q96MC2 740 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 NSRP1Q9H0G5 558 aaKnown RBP10.49□□□□□ -0.73
SMC2-201ENST00000286398 U3KPZ7 1027 aaPredicted RBP10.49□□□□□ -0.73
SMC2-201ENST00000286398 KIF3CO14782 793 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 LRSAM1Q6UWE0 723 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 CEP126Q9P2H0 1117 aa10.49□□□□□ -0.73
SMC2-201ENST00000286398 NOP2P46087 812 aaKnown RBP10.48□□□□□ -0.73
SMC2-201ENST00000286398 CCDC121Q6ZUS5 278 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 CCDC186Q7Z3E2 898 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 ZNF428Q96B54 188 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.48□□□□□ -0.73
SMC2-201ENST00000286398 V9GYY5 206 aaPredicted RBP10.48□□□□□ -0.73
SMC2-201ENST00000286398 C11orf95C9JLR9 678 aaPredicted RBP10.48□□□□□ -0.73
SMC2-201ENST00000286398 MTIF2P46199 727 aaKnown RBP10.48□□□□□ -0.73
SMC2-201ENST00000286398 UBE2HP62256 183 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 GLRX3O76003 335 aaKnown RBP10.48□□□□□ -0.73
SMC2-201ENST00000286398 CKAP4Q07065 602 aaKnown RBP10.48□□□□□ -0.73
SMC2-201ENST00000286398 KIF6Q6ZMV9 814 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 CCDC155Q8N6L0 562 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 EHBP1Q8NDI1 1231 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 MPHOSPH10O00566 681 aaKnown RBP10.48□□□□□ -0.73
SMC2-201ENST00000286398 MX1P20591 662 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 NUTM2GQ5VZR2 741 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 RSRC1Q96IZ7 334 aaKnown RBP10.48□□□□□ -0.73
SMC2-201ENST00000286398 RRBP1Q9P2E9 1410 aaKnown RBP10.48□□□□□ -0.73
SMC2-201ENST00000286398 SWAP70Q9UH65 585 aa10.48□□□□□ -0.73
SMC2-201ENST00000286398 OPA1O60313 960 aa10.47□□□□□ -0.73
SMC2-201ENST00000286398 ZNF76P36508 570 aa10.47□□□□□ -0.73
SMC2-201ENST00000286398 RAPGEF2Q9Y4G8 1499 aa10.47□□□□□ -0.73
SMC2-201ENST00000286398 CTNNA2P26232 953 aa10.47□□□□□ -0.73
SMC2-201ENST00000286398 PLEKHO1Q53GL0 409 aaPredicted RBP10.47□□□□□ -0.73
SMC2-201ENST00000286398 STX6O43752 255 aa10.47□□□□□ -0.73
SMC2-201ENST00000286398 GIMAP6Q6P9H5 292 aa10.47□□□□□ -0.73
SMC2-201ENST00000286398 SMAP1Q8IYB5 467 aaPredicted RBP10.47□□□□□ -0.73
SMC2-201ENST00000286398 CCDC114Q96M63 670 aa10.47□□□□□ -0.73
SMC2-201ENST00000286398 PHAXQ9H814 394 aaKnown RBP10.47□□□□□ -0.73
SMC2-201ENST00000286398 KIF5BP33176 963 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 UBA5Q9GZZ9 404 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 TTC12Q9H892 705 aaPredicted RBP10.46□□□□□ -0.73
SMC2-201ENST00000286398 A0A1B0GUA9 196 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 MXRA7P84157 204 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 SLFN5Q08AF3 891 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 TMEM132EQ6IEE7 984 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 SULT6B1Q6IMI4 303 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 KIF1BPQ96EK5 621 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 CECR2Q9BXF3 1484 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 A0A1W2PRG0 241 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 MYO1BO43795 1136 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 ANKS4BQ8N8V4 417 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 PPP1R14CQ8TAE6 165 aa10.46□□□□□ -0.73
SMC2-201ENST00000286398 AKR1B10O60218 316 aa10.46□□□□□ -0.74
SMC2-201ENST00000286398 FAM184BQ9ULE4 1060 aa10.46□□□□□ -0.74
SMC2-201ENST00000286398 USP5P45974 858 aa10.46□□□□□ -0.74
SMC2-201ENST00000286398 KIAA0753Q2KHM9 967 aa10.46□□□□□ -0.74
SMC2-201ENST00000286398 FEZ1Q99689 392 aa10.46□□□□□ -0.74
SMC2-201ENST00000286398 CCDC196A0A1B0GTZ2 297 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 IDH1O75874 414 aaKnown RBP10.45□□□□□ -0.74
SMC2-201ENST00000286398 KIF4AO95239 1232 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 DDX46Q7L014 1031 aaKnown RBP10.45□□□□□ -0.74
SMC2-201ENST00000286398 VPS18Q9P253 973 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 SMARCA5O60264 1052 aaPredicted RBP10.45□□□□□ -0.74
SMC2-201ENST00000286398 PHACTR2O75167 634 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 KIF20AO95235 890 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 ISM2Q6H9L7 571 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 NBPF11Q86T75 865 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 DZIP1Q86YF9 867 aaKnown RBP10.45□□□□□ -0.74
SMC2-201ENST00000286398 MPHOSPH8Q99549 860 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 A0A1B0GUL7 405 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 NOL3O60936 208 aaKnown RBP10.45□□□□□ -0.74
SMC2-201ENST00000286398 ZFYP08048 801 aaPredicted RBP10.45□□□□□ -0.74
SMC2-201ENST00000286398 RFC1P35251 1148 aaPredicted RBP10.45□□□□□ -0.74
SMC2-201ENST00000286398 OGFRQ9NZT2 677 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 N4BP3O15049 544 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 C20orf194Q5TEA3 1177 aa10.45□□□□□ -0.74
SMC2-201ENST00000286398 UBASH3AP57075 661 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 APBB1IPQ7Z5R6 666 aaPredicted RBP10.44□□□□□ -0.74
SMC2-201ENST00000286398 AIDAQ96BJ3 306 aa10.44□□□□□ -0.74
SMC2-201ENST00000286398 IKBKGQ9Y6K9 419 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms