RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 SMTNL1A8MU46 457 aa22.13■■□□□ 1.13
SMPD3-201ENST00000219334 SMARCA5O60264 1052 aaPredicted RBP22.13■■□□□ 1.13
SMPD3-201ENST00000219334 BAG3O95817 575 aa22.13■■□□□ 1.13
SMPD3-201ENST00000219334 PHAXQ9H814 394 aaKnown RBP22.12■■□□□ 1.13
SMPD3-201ENST00000219334 CABP5Q9NP86 173 aa22.12■■□□□ 1.13
SMPD3-201ENST00000219334 GRIN2AQ12879 1464 aa22.12■■□□□ 1.13
SMPD3-201ENST00000219334 FLIIQ13045 1269 aa22.12■■□□□ 1.13
SMPD3-201ENST00000219334 TTF1Q15361 905 aaPredicted RBP22.12■■□□□ 1.13
SMPD3-201ENST00000219334 TNRQ92752 1358 aa22.11■■□□□ 1.13
SMPD3-201ENST00000219334 GOLGA6L10A6NI86 522 aa22.11■■□□□ 1.13
SMPD3-201ENST00000219334 AXDND1Q5T1B0 1012 aaPredicted RBP22.11■■□□□ 1.13
SMPD3-201ENST00000219334 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
SMPD3-201ENST00000219334 TMEM266Q2M3C6 531 aa22.11■■□□□ 1.13
SMPD3-201ENST00000219334 SPTY2D1Q68D10 685 aaPredicted RBP22.11■■□□□ 1.13
SMPD3-201ENST00000219334 SNRPA1P09661 255 aaKnown RBP22.11■■□□□ 1.13
SMPD3-201ENST00000219334 ACEP12821 1306 aa22.11■■□□□ 1.13
SMPD3-201ENST00000219334 MAP3K2Q9Y2U5 619 aa22.1■■□□□ 1.13
SMPD3-201ENST00000219334 FAM135AQ9P2D6 1515 aa22.1■■□□□ 1.13
SMPD3-201ENST00000219334 NBPF6Q5VWK0 638 aa22.1■■□□□ 1.13
SMPD3-201ENST00000219334 NBPF5PQ86XG9 351 aaPredicted RBP22.1■■□□□ 1.13
SMPD3-201ENST00000219334 NBPF4Q96M43 638 aa22.1■■□□□ 1.13
SMPD3-201ENST00000219334 IFIT3O14879 490 aaKnown RBP22.1■■□□□ 1.13
SMPD3-201ENST00000219334 MYO1BO43795 1136 aa22.1■■□□□ 1.13
SMPD3-201ENST00000219334 SSR1P43307 286 aaKnown RBP22.1■■□□□ 1.13
SMPD3-201ENST00000219334 CIZ1Q9ULV3 898 aaPredicted RBP22.1■■□□□ 1.13
SMPD3-201ENST00000219334 FANCAO15360 1455 aa22.1■■□□□ 1.13
SMPD3-201ENST00000219334 HLA-DOAP06340 250 aa22.1■■□□□ 1.13
SMPD3-201ENST00000219334 RARSP54136 660 aaKnown RBP22.09■■□□□ 1.13
SMPD3-201ENST00000219334 CATIPQ7Z7H3 387 aa22.09■■□□□ 1.13
SMPD3-201ENST00000219334 CCDC83Q8IWF9 413 aa22.09■■□□□ 1.13
SMPD3-201ENST00000219334 PTPRCP08575 1304 aa22.09■■□□□ 1.13
SMPD3-201ENST00000219334 CCDC194A0A1B0GVG4 234 aa22.09■■□□□ 1.13
SMPD3-201ENST00000219334 ANKRD62A6NC57 917 aa22.09■■□□□ 1.13
SMPD3-201ENST00000219334 NOS1P29475 1434 aa22.09■■□□□ 1.13
SMPD3-201ENST00000219334 C8orf76Q96K31 380 aa22.09■■□□□ 1.13
SMPD3-201ENST00000219334 CETN2P41208 172 aa22.09■■□□□ 1.13
SMPD3-201ENST00000219334 CCDC82Q8N4S0 544 aa22.09■■□□□ 1.13
SMPD3-201ENST00000219334 C14orf93Q9H972 538 aaKnown RBP22.09■■□□□ 1.13
SMPD3-201ENST00000219334 NPHP3Q7Z494 1330 aa22.08■■□□□ 1.13
SMPD3-201ENST00000219334 ATP5J2-PTCD1G3V325 749 aa22.08■■□□□ 1.13
SMPD3-201ENST00000219334 BACH2Q9BYV9 841 aa22.08■■□□□ 1.13
SMPD3-201ENST00000219334 ABCC5O15440 1437 aa22.08■■□□□ 1.13
SMPD3-201ENST00000219334 CCDC191Q8NCU4 936 aa22.08■■□□□ 1.13
SMPD3-201ENST00000219334 ZNF397Q8NF99 534 aaPredicted RBP22.08■■□□□ 1.12
SMPD3-201ENST00000219334 TSG101Q99816 390 aa22.08■■□□□ 1.12
SMPD3-201ENST00000219334 TMEM87AQ8NBN3 555 aa22.07■■□□□ 1.12
SMPD3-201ENST00000219334 FERMT3Q86UX7 667 aa22.07■■□□□ 1.12
SMPD3-201ENST00000219334 NCOA1Q15788 1441 aa22.07■■□□□ 1.12
SMPD3-201ENST00000219334 NLRP5P59047 1200 aa22.07■■□□□ 1.12
SMPD3-201ENST00000219334 UBE3BQ7Z3V4 1068 aa22.07■■□□□ 1.12
SMPD3-201ENST00000219334 TAF4BQ92750 862 aa22.07■■□□□ 1.12
SMPD3-201ENST00000219334 UBA5Q9GZZ9 404 aa22.07■■□□□ 1.12
SMPD3-201ENST00000219334 SH2B1Q9NRF2 756 aaPredicted RBP22.07■■□□□ 1.12
SMPD3-201ENST00000219334 NSD2O96028 1365 aa22.06■■□□□ 1.12
SMPD3-201ENST00000219334 GOLGA8AA7E2F4 631 aa22.06■■□□□ 1.12
SMPD3-201ENST00000219334 GOLGA8BA8MQT2 603 aa22.06■■□□□ 1.12
SMPD3-201ENST00000219334 H0YHG0 523 aa22.06■■□□□ 1.12
SMPD3-201ENST00000219334 PDE4BQ07343 736 aa22.06■■□□□ 1.12
SMPD3-201ENST00000219334 HMGN5P82970 282 aaKnown RBP22.06■■□□□ 1.12
SMPD3-201ENST00000219334 ZCRB1Q8TBF4 217 aaKnown RBP22.06■■□□□ 1.12
SMPD3-201ENST00000219334 SSRP1Q08945 709 aaKnown RBP22.06■■□□□ 1.12
SMPD3-201ENST00000219334 CCDC12Q8WUD4 166 aaPredicted RBP22.06■■□□□ 1.12
SMPD3-201ENST00000219334 EPB41L2O43491 1005 aaKnown RBP22.05■■□□□ 1.12
SMPD3-201ENST00000219334 CCDC152Q4G0S7 254 aa22.05■■□□□ 1.12
SMPD3-201ENST00000219334 DHX29Q7Z478 1369 aaKnown RBP22.05■■□□□ 1.12
SMPD3-201ENST00000219334 BAG4O95429 457 aaKnown RBP22.05■■□□□ 1.12
SMPD3-201ENST00000219334 FAM177A1Q8N128 213 aaPredicted RBP22.05■■□□□ 1.12
SMPD3-201ENST00000219334 DNAJC5BQ9UF47 199 aa22.05■■□□□ 1.12
SMPD3-201ENST00000219334 KIF20AO95235 890 aa22.05■■□□□ 1.12
SMPD3-201ENST00000219334 JAKMIP3Q5VZ66 844 aa22.05■■□□□ 1.12
SMPD3-201ENST00000219334 IQCEQ6IPM2 695 aa22.05■■□□□ 1.12
SMPD3-201ENST00000219334 KIF5BP33176 963 aa22.04■■□□□ 1.12
SMPD3-201ENST00000219334 KIAA1328Q86T90 577 aa22.04■■□□□ 1.12
SMPD3-201ENST00000219334 SMARCC1Q92922 1105 aaPredicted RBP22.04■■□□□ 1.12
SMPD3-201ENST00000219334 ECHDC1Q9NTX5 307 aa22.04■■□□□ 1.12
SMPD3-201ENST00000219334 CCDC184Q52MB2 194 aa22.04■■□□□ 1.12
SMPD3-201ENST00000219334 EVI5LQ96CN4 794 aa22.04■■□□□ 1.12
SMPD3-201ENST00000219334 MAP3K11Q16584 847 aa22.04■■□□□ 1.12
SMPD3-201ENST00000219334 GOLIM4O00461 696 aa22.03■■□□□ 1.12
SMPD3-201ENST00000219334 CFAP100Q494V2 611 aa22.03■■□□□ 1.12
SMPD3-201ENST00000219334 TSPY2A6NKD2 308 aa22.03■■□□□ 1.12
SMPD3-201ENST00000219334 FKBP15Q5T1M5 1219 aa22.03■■□□□ 1.12
SMPD3-201ENST00000219334 GSTO1P78417 241 aa22.03■■□□□ 1.12
SMPD3-201ENST00000219334 SETDB2Q96T68 719 aa22.03■■□□□ 1.12
SMPD3-201ENST00000219334 FILIP1Q7Z7B0 1213 aa22.02■■□□□ 1.12
SMPD3-201ENST00000219334 MAP7D2Q96T17 732 aa22.02■■□□□ 1.12
SMPD3-201ENST00000219334 PIK3R4Q99570 1358 aa22.02■■□□□ 1.12
SMPD3-201ENST00000219334 PI4KAP2A4QPH2 592 aa22.02■■□□□ 1.12
SMPD3-201ENST00000219334 ANKRD13DQ6ZTN6 518 aa22.02■■□□□ 1.12
SMPD3-201ENST00000219334 PI4KAP1Q8N8J0 262 aa22.02■■□□□ 1.12
SMPD3-201ENST00000219334 UQCRFS1P1P0C7P4 283 aa22.02■■□□□ 1.12
SMPD3-201ENST00000219334 CCDC150Q8NCX0 1101 aa22.02■■□□□ 1.12
SMPD3-201ENST00000219334 SCAND2PQ9GZW5 306 aaPredicted RBP22.02■■□□□ 1.12
SMPD3-201ENST00000219334 SNRKQ9NRH2 765 aa22.02■■□□□ 1.12
SMPD3-201ENST00000219334 FGFR1OPO95684 399 aaKnown RBP22.01■■□□□ 1.11
SMPD3-201ENST00000219334 C8orf37Q96NL8 207 aa22.01■■□□□ 1.11
SMPD3-201ENST00000219334 ERLIN1O75477 346 aa22.01■■□□□ 1.11
SMPD3-201ENST00000219334 ATP6V1AP38606 617 aa22.01■■□□□ 1.11
SMPD3-201ENST00000219334 SCAF11Q99590 1463 aaKnown RBP22.01■■□□□ 1.11
SMPD3-201ENST00000219334 TTC21AQ8NDW8 1320 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms