RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-231	ENST00000641939	H2AFY	O75367	372 aa	Known RBP	14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	STK16	O75716	305 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	KLHL18	O94889	574 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	S100B	P04271	92 aa	Predicted RBP	14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	C1GALT1C1L	P0DN25	315 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	CXCR2	P25025	360 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	VARS	P26640	1264 aa	Known RBP	14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	HSPA7	P48741	367 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	RBBP5	Q15291	538 aa	Known RBP	14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	FBXO48	Q5FWF7	155 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	SLCO4C1	Q6ZQN7	724 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	ISCA2	Q86U28	154 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	PDSS2	Q86YH6	399 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	AFAP1L2	Q8N4X5	818 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	ANKRD53	Q8N9V6	530 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	TRPV3	Q8NET8	790 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	OR51Q1	Q8NH59	317 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	NT5C	Q8TCD5	201 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	EXT2	Q93063	718 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	C8orf44	Q96CB5	159 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	MESP1	Q9BRJ9	268 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	ZNF552	Q9H707	407 aa	Predicted RBP	14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	SNX15	Q9NRS6	342 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	HCN3	Q9P1Z3	774 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	PTBP2	Q9UKA9	531 aa	Known RBP	14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	MKL2	Q9ULH7	1088 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	RELN	P78509	3460 aa		14.23	□□□□□ -0.13
PHGDH-231	ENST00000641939	URAD	A6NGE7	173 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	KERA	O60938	352 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	RDH16	O75452	317 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	WISP1	O95388	367 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	HP	P00738	406 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	C2	P06681	752 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	ALOX12	P18054	663 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	XCR1	P46094	333 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	KCNC1	P48547	511 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	CSRP3	P50461	194 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	SKP1	P63208	163 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	SLBP	Q14493	270 aa	Known RBP eCLIP	14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	FAM83E	Q2M2I3	478 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	NADK2	Q4G0N4	442 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	IRAK1BP1	Q5VVH5	260 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	FAAH2	Q6GMR7	532 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	NIPAL1	Q6NVV3	410 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	ABHD13	Q7L211	337 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	NDUFAF7	Q7L592	441 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	PARP9	Q8IXQ6	854 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	IFT20	Q8IY31	132 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	CENPL	Q8N0S6	344 aa	Predicted RBP	14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	SNX31	Q8N9S9	440 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	SLC44A1	Q8WWI5	657 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	NXNL1	Q96CM4	212 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	ATOH8	Q96SQ7	321 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	EHD1	Q9H4M9	534 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	ZNF160	Q9HCG1	818 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	NUDT4	Q9NZJ9	180 aa		14.22	□□□□□ -0.13
PHGDH-231	ENST00000641939	LOC102723996	A0A087X1L8	192 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939		A0A096LPK6	155 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939		A0A1W2PQ72	361 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	SUPT3H	B4E1H0	165 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	CLGN	O14967	610 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	GALR3	O60755	368 aa	Predicted RBP	14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	SUPT3H	O75486	399 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	JRK	O75564	520 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	SERPINA6	P08185	405 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	INHBA	P08476	426 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	CYC1	P08574	325 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	ZNF888	P0CJ79	500 aa	Predicted RBP	14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	COX6A1	P12074	109 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	TYK2	P29597	1187 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	SERPINB8	P50452	374 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	IRF9	Q00978	393 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	EEF1A2	Q05639	463 aa	Known RBP	14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	PDK4	Q16654	411 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	MINDY4	Q4G0A6	757 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	DEFB134	Q4QY38	66 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	MFSD4B	Q5TF39	518 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	JMJD6	Q6NYC1	403 aa	Predicted RBP	14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	TMEM205	Q6UW68	189 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	IGFL3	Q6UXB1	125 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	TMIGD1	Q6UXZ0	262 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	KRT78	Q8N1N4	520 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	RBMXL3	Q8N7X1	1067 aa	Known RBP	14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	TTL	Q8NG68	377 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	RHEBL1	Q8TAI7	183 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	UTP15	Q8TED0	518 aa	Known RBP	14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	CREB3L4	Q8TEY5	395 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	KCTD4	Q8WVF5	259 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	ESAM	Q96AP7	390 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	MFRP	Q9BY79	579 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	CD244	Q9BZW8	370 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	SLC6A16	Q9GZN6	736 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	PITHD1	Q9GZP4	211 aa	Predicted RBP	14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	VN1R1	Q9GZP7	353 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	LHPP	Q9H008	270 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	COPG2	Q9UBF2	871 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	NFU1	Q9UMS0	254 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	IKBKG	Q9Y6K9	419 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	SHANK1	Q9Y566	2161 aa		14.21	□□□□□ -0.13
PHGDH-231	ENST00000641939	IGHV1-45	A0A0A0MS14	117 aa		14.2	□□□□□ -0.14

Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms