RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 WFS1O76024 890 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 GSTA2P09210 222 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 SOX11P35716 441 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 AHRP35869 848 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 TSFMP43897 325 aaKnown RBP17.11■□□□□ 0.33
CCDC12-208ENST00000603885 SCTRP47872 440 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 ARG2P78540 354 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 REEP5Q00765 189 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 CDC16Q13042 620 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 NR6A1Q15406 480 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 NIPAL1Q6NVV3 410 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 C3orf62Q6ZUJ4 267 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 CYS1Q717R9 158 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 TMPRSS11BQ86T26 416 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 SIRT6Q8N6T7 355 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 ZNF740Q8NDX6 193 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 NT5CQ8TCD5 201 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 PSMF1Q92530 271 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 MOCOSQ96EN8 888 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 CYTH2Q99418 400 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 CPNE1Q99829 537 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 AIF1LQ9BQI0 150 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 PHACTR1Q9C0D0 580 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 DERL2Q9GZP9 239 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 SPNS1Q9H2V7 528 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 MTO1Q9Y2Z2 717 aaKnown RBP17.11■□□□□ 0.33
CCDC12-208ENST00000603885 ZNF860A6NHJ4 632 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 CELA2AP08217 269 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 ALOX12P18054 663 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 IL10P22301 178 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 GP5P40197 560 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 AGTR2P50052 363 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 PLTPP55058 493 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 USP10Q14694 798 aaKnown RBP17.1■□□□□ 0.33
CCDC12-208ENST00000603885 EIF2S3LQ2VIR3 472 aaKnown RBP17.1■□□□□ 0.33
CCDC12-208ENST00000603885 NXPE4Q6UWF7 544 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 LANCL3Q6ZV70 420 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 ABHD13Q7L211 337 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 CPEB2Q7Z5Q1 589 aaKnown RBP17.1■□□□□ 0.33
CCDC12-208ENST00000603885 AFAP1L2Q8N4X5 818 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 IMMP1LQ96LU5 166 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 OR1F2PQ96R84 312 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 RBBP8Q99708 897 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 BARD1Q99728 777 aaKnown RBP17.1■□□□□ 0.33
CCDC12-208ENST00000603885 CAB39LQ9H9S4 337 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 NTNG1Q9Y2I2 539 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 SPTBN1Q01082 2364 aaKnown RBP17.1■□□□□ 0.33
CCDC12-208ENST00000603885 MAST4O15021 2626 aa17.1■□□□□ 0.33
CCDC12-208ENST00000603885 BLACEA4D250 179 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 URADA6NGE7 173 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 FAM159BA6NKW6 160 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 GALR3O60755 368 aaPredicted RBP17.09■□□□□ 0.33
CCDC12-208ENST00000603885 SEC24DO94855 1032 aaPredicted RBP17.09■□□□□ 0.33
CCDC12-208ENST00000603885 WISP3O95389 354 aaPredicted RBP17.09■□□□□ 0.33
CCDC12-208ENST00000603885 CBX6O95503 412 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 ITGAMP11215 1152 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 STMN1P16949 149 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 ELOAQ14241 798 aaKnown RBP17.09■□□□□ 0.33
CCDC12-208ENST00000603885 DEFB134Q4QY38 66 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 ZNF572Q7Z3I7 529 aaPredicted RBP17.09■□□□□ 0.33
CCDC12-208ENST00000603885 CCDC25Q86WR0 208 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 CTAGE3PQ8IX95 158 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 SHISA5Q8N114 240 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 TRPV3Q8NET8 790 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 PRR7Q8TB68 274 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 FBXO25Q8TCJ0 367 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 PEX11GQ96HA9 241 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 GPR22Q99680 433 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 LRRC4CQ9HCJ2 640 aa17.09■□□□□ 0.33
CCDC12-208ENST00000603885 HIVEP3Q5T1R4 2406 aa17.08■□□□□ 0.33
CCDC12-208ENST00000603885 IGHV3-20A0A0C4DH32 117 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 ANKUB1A6NFN9 424 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 NCF1BA6NI72 391 aaPredicted RBP17.08■□□□□ 0.32
CCDC12-208ENST00000603885 NCF1CA8MVU1 366 aaPredicted RBP17.08■□□□□ 0.32
CCDC12-208ENST00000603885 PHGDHO43175 533 aaKnown RBP17.08■□□□□ 0.32
CCDC12-208ENST00000603885 WDR47O94967 919 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 ZNF888P0CJ79 500 aaPredicted RBP17.08■□□□□ 0.32
CCDC12-208ENST00000603885 CCDC166P0CW27 439 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 NCF1P14598 390 aaPredicted RBP17.08■□□□□ 0.32
CCDC12-208ENST00000603885 GNAZP19086 355 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 SLC6A12P48065 614 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 GPX6P59796 221 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 RBBP5Q15291 538 aaKnown RBP17.08■□□□□ 0.32
CCDC12-208ENST00000603885 TGFBIQ15582 683 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 PLAG1Q6DJT9 500 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 ANKRD37Q7Z713 158 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 KLHDC8AQ8IYD2 350 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 TCAIMQ8N3R3 496 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 ANKRD53Q8N9V6 530 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 CATSPER1Q8NEC5 780 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 OR5T3Q8NGG3 340 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 SSC4DQ8WTU2 575 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 RHBDF1Q96CC6 855 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 PSMG3-AS1Q96PY0 264 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 RBCK1Q9BYM8 510 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 UNKQ9C0B0 810 aaKnown RBP17.08■□□□□ 0.32
CCDC12-208ENST00000603885 TEKT2Q9UIF3 430 aa17.08■□□□□ 0.32
CCDC12-208ENST00000603885 UTP20O75691 2785 aaKnown RBP17.07■□□□□ 0.32
CCDC12-208ENST00000603885 TRAV17A0A0B4J275 112 aa17.07■□□□□ 0.32
CCDC12-208ENST00000603885 OR2W5A6NFC9 320 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms