RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 CCDC68Q9H2F9 335 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 GSTO2Q9H4Y5 243 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 COG4Q9H9E3 785 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 SLC23A2Q9UGH3 650 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 TAGLN3Q9UI15 199 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 TMCO1Q9UM00 188 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 ACANP16112 2415 aa12.3□□□□□ -0.44
SCAF1-202ENST00000595242 H3BMM5 538 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 KLK8O60259 260 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 KERAO60938 352 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 SMIM24O75264 130 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 WFS1O76024 890 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 TSPAN12O95859 305 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 SLC4A1P02730 911 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 ESRRAP11474 423 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-202ENST00000595242 MTHFD2P13995 350 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 ADSLP30566 484 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-202ENST00000595242 FMO4P31512 558 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 RORAP35398 523 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 PPARGP37231 505 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-202ENST00000595242 SPAM1P38567 509 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 CDKN1CP49918 316 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-202ENST00000595242 CDC16Q13042 620 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 PLA2G4EQ3MJ16 856 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 GPR33Q49SQ1 333 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 CFAP157Q5JU67 520 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 SH2D4BQ5SQS7 431 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 ZNF678Q5SXM1 525 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 ZNF648Q5T619 568 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-202ENST00000595242 CRTC3Q6UUV7 619 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 ABRAXAS1Q6UWZ7 409 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 MRGPREQ86SM8 312 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 KIF2BQ8N4N8 673 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 ZNF808Q8N4W9 903 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-202ENST00000595242 CD200R1Q8TD46 325 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 PDLIM5Q96HC4 596 aaKnown RBP12.29□□□□□ -0.44
SCAF1-202ENST00000595242 IP6K3Q96PC2 410 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 SLX1AQ9BQ83 275 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 WDR77Q9BQA1 342 aaPredicted RBP12.29□□□□□ -0.44
SCAF1-202ENST00000595242 BTBD10Q9BSF8 475 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 C1QTNF3Q9BXJ4 246 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 OR2AG1Q9H205 316 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 C1orf21Q9H246 121 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 ZNF385DQ9H6B1 395 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 ALG9Q9H6U8 611 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 ZDHHC2Q9UIJ5 367 aa12.29□□□□□ -0.44
SCAF1-202ENST00000595242 C1orf232A0A0U1RR37 186 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 TLCD2A6NGC4 264 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 MASP2O00187 686 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 PEX12O00623 359 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 PRMT5O14744 637 aaPredicted RBP12.28□□□□□ -0.44
SCAF1-202ENST00000595242 JRKO75564 520 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 CLDN7O95471 211 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 TPBGLP0DKB5 382 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 CD1EP15812 388 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 ZNF7P17097 686 aaPredicted RBP12.28□□□□□ -0.44
SCAF1-202ENST00000595242 ITGALP20701 1170 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 TSFMP43897 325 aaKnown RBP12.28□□□□□ -0.44
SCAF1-202ENST00000595242 KCNC1P48547 511 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 HERVK_113P63132 956 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 NCF4Q15080 339 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 OR4D1Q15615 310 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 SLC9B1Q4ZJI4 515 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 TMTC4Q5T4D3 741 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 HENMT1Q5T8I9 393 aaKnown RBP12.28□□□□□ -0.44
SCAF1-202ENST00000595242 ZDHHC20Q5W0Z9 365 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 UGT3A1Q6NUS8 523 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 PAQR3Q6TCH7 311 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 RAVER1Q8IY67 606 aaKnown RBP12.28□□□□□ -0.44
SCAF1-202ENST00000595242 SYTL1Q8IYJ3 562 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 GIMAP7Q8NHV1 300 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 STAG3L4Q8TBR4 150 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 DTX3LQ8TDB6 740 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 CCDC120Q96HB5 630 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 TTC1Q99614 292 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 GPR21Q99679 349 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 MIPEPQ99797 713 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 ERVK-6Q9BXR3 956 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 MMADHCQ9H3L0 296 aaPredicted RBP12.28□□□□□ -0.44
SCAF1-202ENST00000595242 EML4Q9HC35 981 aaKnown RBP12.28□□□□□ -0.44
SCAF1-202ENST00000595242 BPIFA1Q9NP55 256 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 TCF7L2Q9NQB0 619 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 ARMCX1Q9P291 453 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 NFKBIL1Q9UBC1 381 aaPredicted RBP12.28□□□□□ -0.44
SCAF1-202ENST00000595242 SUCOQ9UBS9 1254 aaKnown RBP12.28□□□□□ -0.44
SCAF1-202ENST00000595242 PADI2Q9Y2J8 665 aa12.28□□□□□ -0.44
SCAF1-202ENST00000595242 GLYATL1P3A0A0U1RQE8 302 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 TRPC5OSA6NMA1 111 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 SYCE1LA8MT33 242 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 STX16-NPEPL1H3BU86 382 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 STX16O14662 325 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 NIPSNAP2O75323 286 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 PRAMEF1O95521 474 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 ZBTB11O95625 1053 aaPredicted RBP12.27□□□□□ -0.45
SCAF1-202ENST00000595242 ACRV1P26436 265 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 HNRNPH1P31943 449 aaKnown RBP12.27□□□□□ -0.45
SCAF1-202ENST00000595242 CLCN7P51798 805 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 ALDH18A1P54886 795 aaKnown RBP12.27□□□□□ -0.45
SCAF1-202ENST00000595242 SOX8P57073 446 aa12.27□□□□□ -0.45
SCAF1-202ENST00000595242 ABRQ12979 859 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms