RNA–Protein interactions for RNA: ENST00000594387.1

IRF3-208, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-208ENST00000594387 RIC8BQ9NVN3 520 aa16.44■□□□□ 0.22
IRF3-208ENST00000594387 GPRC5BQ9NZH0 403 aa16.44■□□□□ 0.22
IRF3-208ENST00000594387 MRPS2Q9Y399 296 aaKnown RBP16.44■□□□□ 0.22
IRF3-208ENST00000594387 NAALAD2Q9Y3Q0 740 aa16.44■□□□□ 0.22
IRF3-208ENST00000594387 A0A087X1B8 175 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 VPS4BO75351 444 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 WFS1O76024 890 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 KLHL18O94889 574 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 BMP10O95393 424 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 C8orf89P0DMQ9 161 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 ALOX12P18054 663 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 GDF5P43026 501 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 REEP5Q00765 189 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 HIST2H2ACQ16777 129 aaPredicted RBP16.43■□□□□ 0.22
IRF3-208ENST00000594387 FAM83EQ2M2I3 478 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 MROH9Q5TGP6 573 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 HIST2H2AA3Q6FI13 130 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 KLC3Q6P597 504 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 IGFL3Q6UXB1 125 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 TMEM151BQ8IW70 566 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 ZC3H7AQ8IWR0 971 aaKnown RBP16.43■□□□□ 0.22
IRF3-208ENST00000594387 NT5CQ8TCD5 201 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 CPT1CQ8TCG5 803 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 CCT6BQ92526 530 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 C8orf44Q96CB5 159 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 FAR2Q96K12 515 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 UBXN10Q96LJ8 280 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 PITHD1Q9GZP4 211 aaPredicted RBP16.43■□□□□ 0.22
IRF3-208ENST00000594387 ILKAPQ9H0C8 392 aaPredicted RBP16.43■□□□□ 0.22
IRF3-208ENST00000594387 HCN3Q9P1Z3 774 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 DMGDHQ9UI17 866 aaKnown RBP16.43■□□□□ 0.22
IRF3-208ENST00000594387 VPS4AQ9UN37 437 aa16.43■□□□□ 0.22
IRF3-208ENST00000594387 KALRNO60229 2985 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 ANKDD1BA6NHY2 528 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 SYCE1LA8MT33 242 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 SUPT3HB4E1H0 165 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 MASP2O00187 686 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 RDH16O75452 317 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 SUPT3HO75486 399 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 WISP3O95389 354 aaPredicted RBP16.42■□□□□ 0.22
IRF3-208ENST00000594387 TFEBP19484 476 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 JAK1P23458 1154 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 GSTM2P28161 218 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 TYK2P29597 1187 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 SLC6A12P48065 614 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 STXBP1P61764 594 aaKnown RBP16.42■□□□□ 0.22
IRF3-208ENST00000594387 FOXK1P85037 733 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 EEF1A2Q05639 463 aaKnown RBP16.42■□□□□ 0.22
IRF3-208ENST00000594387 LAPTM5Q13571 262 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 TMIGD1Q6UXZ0 262 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 PRSS41Q7RTY9 318 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 CMC1Q7Z7K0 106 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 RELL1Q8IUW5 271 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 NOA1Q8NC60 698 aaKnown RBP16.42■□□□□ 0.22
IRF3-208ENST00000594387 ZNF740Q8NDX6 193 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 OR1F2PQ96R84 312 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 TUBB6Q9BUF5 446 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 ACSS3Q9H6R3 686 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 ALG9Q9H6U8 611 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 CLK4Q9HAZ1 481 aaKnown RBP16.42■□□□□ 0.22
IRF3-208ENST00000594387 NINJ2Q9NZG7 142 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 NUDT4Q9NZJ9 180 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 B3GNT3Q9Y2A9 372 aa16.42■□□□□ 0.22
IRF3-208ENST00000594387 A0A088AWK7 358 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 PSMD12O00232 456 aaPredicted RBP16.41■□□□□ 0.22
IRF3-208ENST00000594387 CCNT2O60583 730 aaKnown RBP16.41■□□□□ 0.22
IRF3-208ENST00000594387 ACSL3O95573 720 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 C1QAP02745 245 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 SERPINA6P08185 405 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 INHBAP08476 426 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 ZNF10P21506 573 aaPredicted RBP16.41■□□□□ 0.22
IRF3-208ENST00000594387 GGT5P36269 586 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 HNF4AP41235 474 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 HSPA7P48741 367 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 AGTR2P50052 363 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 ACTN3Q08043 901 aaPredicted RBP16.41■□□□□ 0.22
IRF3-208ENST00000594387 EFTUD2Q15029 972 aaKnown RBP eCLIP16.41■□□□□ 0.222e-8■■■■□ 21.9
IRF3-208ENST00000594387 OR4D1Q15615 310 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 IGFBP7Q16270 282 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 PDK4Q16654 411 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 DEFB134Q4QY38 66 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 XKR6Q5GH73 641 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 PAGE2BQ5JRK9 111 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 SLC6A19Q695T7 634 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 ISLR2Q6UXK2 745 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 RIPOR1Q6ZS17 1223 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 IFT20Q8IY31 132 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 KLHDC8AQ8IYD2 350 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 IQCKQ8N0W5 287 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 RBMXL3Q8N7X1 1067 aaKnown RBP16.41■□□□□ 0.22
IRF3-208ENST00000594387 PDPRQ8NCN5 879 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 MOCOSQ96EN8 888 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 PEX11GQ96HA9 241 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 SEC16BQ96JE7 1060 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 LMF1Q96S06 567 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 SLC29A3Q9BZD2 475 aa16.41■□□□□ 0.22
IRF3-208ENST00000594387 CDC42EP4Q9H3Q1 356 aaKnown RBP16.41■□□□□ 0.22
IRF3-208ENST00000594387 IGHV1-45A0A0A0MS14 117 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 CCDC189A1A4V9 331 aa16.4■□□□□ 0.22
IRF3-208ENST00000594387 GALR3O60755 368 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms