RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.9■□□□□ 0.14
LIG1-206ENST00000594067 CPTPQ5TA50 214 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 GAREM2Q75VX8 874 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 METTL3Q86U44 580 aaKnown RBP15.9■□□□□ 0.14
LIG1-206ENST00000594067 P3H2Q8IVL5 708 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 C1orf52Q8N6N3 182 aaKnown RBP15.9■□□□□ 0.14
LIG1-206ENST00000594067 Q8N9G6 341 aaPredicted RBP15.9■□□□□ 0.14
LIG1-206ENST00000594067 GPR156Q8NFN8 814 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 CD99L2Q8TCZ2 262 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 TPK1Q9H3S4 243 aa15.9■□□□□ 0.14
LIG1-206ENST00000594067 SPATA6Q9NWH7 488 aaPredicted RBP15.9■□□□□ 0.14
LIG1-206ENST00000594067 ARHGEF33A8MVX0 844 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 E9PQ18 207 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 OPN1SWP03999 348 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 INHAP05111 366 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 TCEA1P23193 301 aaKnown RBP15.89■□□□□ 0.13
LIG1-206ENST00000594067 C21orf33P30042 268 aaPredicted RBP15.89■□□□□ 0.13
LIG1-206ENST00000594067 RAE1P78406 368 aaKnown RBP15.89■□□□□ 0.13
LIG1-206ENST00000594067 ANGPTL8Q6UXH0 198 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 HTR3DQ70Z44 454 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 TMCO2Q7Z6W1 182 aaPredicted RBP15.89■□□□□ 0.13
LIG1-206ENST00000594067 NAGSQ8N159 534 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 SPPL2AQ8TCT8 520 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 MYLIPQ8WY64 445 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 PROX1Q92786 737 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 TMEM169Q96HH4 297 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 COPS4Q9BT78 406 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 C6orf62Q9GZU0 229 aaPredicted RBP15.89■□□□□ 0.13
LIG1-206ENST00000594067 RMI1Q9H9A7 625 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 SGK2Q9HBY8 427 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 DSCR3O14972 297 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 PQBP1O60828 265 aaKnown RBP15.89■□□□□ 0.13
LIG1-206ENST00000594067 ANXA4P09525 319 aaPredicted RBP15.89■□□□□ 0.13
LIG1-206ENST00000594067 MAGP20916 626 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 GADD45AP24522 165 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 GTF2E2P29084 291 aaKnown RBP15.89■□□□□ 0.13
LIG1-206ENST00000594067 BMPR1AP36894 532 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 NR4A2P43354 598 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 RGNQ15493 299 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 C6orf183Q5T699 404 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 DESI1Q6ICB0 168 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 Q6ZVU0 165 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 FAM124AQ86V42 546 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 CPA6Q8N4T0 437 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 MIR1-1HGQ9H1L0 117 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 CHST8Q9H2A9 424 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 ADPRHL2Q9NX46 363 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 QPCTLQ9NXS2 382 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 RAPGEFL1Q9UHV5 662 aa15.89■□□□□ 0.13
LIG1-206ENST00000594067 TMEM229AB2RXF0 380 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 ASNA1O43681 348 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 SGTAO43765 313 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 PCSK2P16519 638 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 TSEN54Q7Z6J9 526 aaKnown RBP15.88■□□□□ 0.13
LIG1-206ENST00000594067 TCEAL8Q8IYN2 117 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 CLIP4Q8N3C7 705 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 CPXM2Q8N436 756 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 LILRA3Q8N6C8 439 aaPredicted RBP15.88■□□□□ 0.13
LIG1-206ENST00000594067 MRPS31Q92665 395 aaKnown RBP15.88■□□□□ 0.13
LIG1-206ENST00000594067 HRASLS5Q96KN8 279 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 EPYCQ99645 322 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 CDADC1Q9BWV3 514 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 SH3BP4Q9P0V3 963 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 SCN5AQ14524 2016 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 C1orf226A1L170 272 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 GCM2O75603 506 aaPredicted RBP15.88■□□□□ 0.13
LIG1-206ENST00000594067 DBTP11182 482 aaKnown RBP15.88■□□□□ 0.13
LIG1-206ENST00000594067 MPP7Q5T2T1 576 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 AGTRAPQ6RW13 159 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 HSD11B1LQ7Z5J1 315 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 OR52J3Q8NH60 311 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 ASZ1Q8WWH4 475 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 MAGEB10Q96LZ2 347 aaPredicted RBP15.88■□□□□ 0.13
LIG1-206ENST00000594067 OR4K3Q96R72 315 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 FEVQ99581 238 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 NXF2Q9GZY0 626 aaKnown RBP15.88■□□□□ 0.13
LIG1-206ENST00000594067 PCDHGB3Q9Y5G1 929 aa15.88■□□□□ 0.13
LIG1-206ENST00000594067 TNFRSF11BO00300 401 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 DYRK3O43781 588 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 PCDH7O60245 1069 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 POP4O95707 220 aaKnown RBP15.87■□□□□ 0.13
LIG1-206ENST00000594067 PTTG1O95997 202 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 GRK5P34947 590 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 SLC19A1P41440 591 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 CTSKP43235 329 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 BDKRB1P46663 353 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 PREPP48147 710 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 NDUFA5Q16718 116 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 TPRG1LQ5T0D9 272 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 ASTLQ6HA08 431 aaPredicted RBP15.87■□□□□ 0.13
LIG1-206ENST00000594067 PNCKQ6P2M8 343 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 Q6ZVL8 140 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 NPAS3Q8IXF0 933 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 METTL4Q8N3J2 472 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 PARP16Q8N5Y8 322 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 FCGR1BQ92637 280 aa15.87■□□□□ 0.13
LIG1-206ENST00000594067 CLP1Q92989 425 aaKnown RBP15.87■□□□□ 0.13
LIG1-206ENST00000594067 C11orf24Q96F05 449 aaPredicted RBP15.87■□□□□ 0.13
LIG1-206ENST00000594067 ZNF486Q96H40 463 aaPredicted RBP15.87■□□□□ 0.13
LIG1-206ENST00000594067 DOHHQ9BU89 302 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms