RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 Q6ZS92 163 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 ABHD13Q7L211 337 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 PDSS2Q86YH6 399 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 GPSM1Q86YR5 675 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 TCAIMQ8N3R3 496 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 TRPV3Q8NET8 790 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 FBF1Q8TES7 1133 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 PPP4R1Q8TF05 950 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 ZNF592Q92610 1267 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 MOCOSQ96EN8 888 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 LRRC1Q9BTT6 524 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 ZNF700Q9H0M5 742 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 CNOT10Q9H9A5 744 aaKnown RBP14.44□□□□□ -0.1
TRIM28-203ENST00000593582 C19orf25Q9UFG5 118 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-203ENST00000593582 NUP210LQ5VU65 1888 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 URADA6NGE7 173 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 H2AFYO75367 372 aaKnown RBP14.43□□□□□ -0.1
TRIM28-203ENST00000593582 JRKO75564 520 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 SERPINA7P05543 415 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 UQCRHP07919 91 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 CD1DP15813 335 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 ALOX12P18054 663 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 IL10P22301 178 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 GDF5P43026 501 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 SLC6A12P48065 614 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 GUCY2DQ02846 1103 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 SLMAPQ14BN4 828 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 RBBP5Q15291 538 aaKnown RBP14.43□□□□□ -0.1
TRIM28-203ENST00000593582 DEFB134Q4QY38 66 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 CRB2Q5IJ48 1285 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 CDKL4Q5MAI5 379 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 LINC00696Q6ZRV3 163 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 RIPOR1Q6ZS17 1223 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 RAPH1Q70E73 1250 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 AFAP1L2Q8N4X5 818 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 DNAJB14Q8TBM8 379 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 NT5CQ8TCD5 201 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 UBXN10Q96LJ8 280 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 LMF1Q96S06 567 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 CYTH2Q99418 400 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 TUBB6Q9BUF5 446 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 CAPS2Q9BXY5 557 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 SLC29A3Q9BZD2 475 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 SPNS1Q9H2V7 528 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 WWOXQ9NZC7 414 aa14.43□□□□□ -0.1
TRIM28-203ENST00000593582 ZNF860A6NHJ4 632 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 GALR3O60755 368 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-203ENST00000593582 FAM155BO75949 473 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 WFS1O76024 890 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 S100BP04271 92 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-203ENST00000593582 ZNF888P0CJ79 500 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-203ENST00000593582 CRABP2P29373 138 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 CDC16Q13042 620 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 MFAP5Q13361 173 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 UBAP2LQ14157 1087 aaKnown RBP14.42□□□□□ -0.1
TRIM28-203ENST00000593582 PCOLCEQ15113 449 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 OR4D1Q15615 310 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 C18orf21Q32NC0 220 aaPredicted RBP14.42□□□□□ -0.1
TRIM28-203ENST00000593582 SULT1C3Q6IMI6 304 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 CEP128Q6ZU80 1094 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 CUZD1Q86UP6 607 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 KLHDC8AQ8IYD2 350 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 CISD2Q8N5K1 135 aaKnown RBP14.42□□□□□ -0.1
TRIM28-203ENST00000593582 ANKRD53Q8N9V6 530 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 MNS1Q8NEH6 495 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 BRIX1Q8TDN6 353 aaKnown RBP14.42□□□□□ -0.1
TRIM28-203ENST00000593582 KIAA1191Q96A73 305 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 SNRNP40Q96DI7 357 aaKnown RBP14.42□□□□□ -0.1
TRIM28-203ENST00000593582 PEX11GQ96HA9 241 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 OR1F2PQ96R84 312 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 ZDHHC18Q9NUE0 388 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 CD274Q9NZQ7 290 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 MTRF1LQ9UGC7 380 aaKnown RBP14.42□□□□□ -0.1
TRIM28-203ENST00000593582 RNF112Q9ULX5 631 aa14.42□□□□□ -0.1
TRIM28-203ENST00000593582 SERPINA6P08185 405 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 C1GALT1C1LP0DN25 315 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 GNLYP22749 145 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 PHBP35232 272 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 GGT5P36269 586 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 HNF4AP41235 474 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 GLRBP48167 497 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 AGTR2P50052 363 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 EFNA3P52797 238 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 EFTUD2Q15029 972 aaKnown RBP eCLIP14.41□□□□□ -0.18e-15■■■■■ 42.5
TRIM28-203ENST00000593582 TLR1Q15399 786 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 TMIGD1Q6UXZ0 262 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 SLCO4C1Q6ZQN7 724 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 CPEB2Q7Z5Q1 589 aaKnown RBP14.41□□□□□ -0.1
TRIM28-203ENST00000593582 TBC1D1Q86TI0 1168 aaPredicted RBP14.41□□□□□ -0.1
TRIM28-203ENST00000593582 SHISA5Q8N114 240 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 KRT78Q8N1N4 520 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 FAM26EQ8N5C1 309 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 TTLQ8NG68 377 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 OR5T3Q8NGG3 340 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 UTP15Q8TED0 518 aaKnown RBP14.41□□□□□ -0.1
TRIM28-203ENST00000593582 TBC1D20Q96BZ9 403 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 C19orf60Q96EN9 201 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 CNDP1Q96KN2 507 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 SLC6A16Q9GZN6 736 aa14.41□□□□□ -0.1
TRIM28-203ENST00000593582 DNAJC11Q9NVH1 559 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms