RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 CDKN2DP55273 166 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 ACTN3Q08043 901 aaPredicted RBP22.51■■□□□ 1.19
LSM4-202ENST00000593564 USP10Q14694 798 aaKnown RBP22.51■■□□□ 1.19
LSM4-202ENST00000593564 OR1C1Q15619 314 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 RNASEH2BQ5TBB1 312 aaKnown RBP22.51■■□□□ 1.19
LSM4-202ENST00000593564 SLC5A8Q8N695 610 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 GRK7Q8WTQ7 553 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 THAP3Q8WTV1 239 aaPredicted RBP22.51■■□□□ 1.19
LSM4-202ENST00000593564 LINGO1Q96FE5 620 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 SCMH1Q96GD3 660 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 HIST1H2AHQ96KK5 128 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 HIST1H2AJQ99878 128 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 H2AFJQ9BTM1 129 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 RBCK1Q9BYM8 510 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 CHST11Q9NPF2 352 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 SH3BGRL2Q9UJC5 107 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 FBN2P35556 2912 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 OTOGQ6ZRI0 2925 aa22.51■■□□□ 1.19
LSM4-202ENST00000593564 SCN3AQ9NY46 2000 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 ZNF860A6NHJ4 632 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 PGRMC1O00264 195 aaKnown RBP22.5■■□□□ 1.19
LSM4-202ENST00000593564 CDC123O75794 336 aaPredicted RBP22.5■■□□□ 1.19
LSM4-202ENST00000593564 TTC4O95801 387 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 HTR1EP28566 365 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 FNTAP49354 379 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 CCR8P51685 355 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 ZNF630Q2M218 657 aaPredicted RBP22.5■■□□□ 1.19
LSM4-202ENST00000593564 ZXDCQ2QGD7 858 aaPredicted RBP22.5■■□□□ 1.19
LSM4-202ENST00000593564 RBM20Q5T481 1227 aaKnown RBP22.5■■□□□ 1.19
LSM4-202ENST00000593564 DUPD1Q68J44 220 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 KIAA0408Q6ZU52 694 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 CNTN4Q8IWV2 1026 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 LGI4Q8N135 537 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 ZNF740Q8NDX6 193 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 OR4K1Q8NGD4 311 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 OR5T3Q8NGG3 340 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 OR56A3Q8NH54 315 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 TSLPQ969D9 159 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 GPR137Q96N19 417 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 KLHL1Q9NR64 748 aa22.5■■□□□ 1.19
LSM4-202ENST00000593564 ASPDHA6ND91 283 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 GABRR3A8MPY1 467 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 NDUFS4O43181 175 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 MAN1A2O60476 641 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 GALR3O60755 368 aaPredicted RBP22.49■■□□□ 1.19
LSM4-202ENST00000593564 MLYCDO95822 493 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 TSPAN12O95859 305 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 FHP07954 510 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 CD46P15529 392 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 ELAVL4P26378 380 aaKnown RBP22.49■■□□□ 1.19
LSM4-202ENST00000593564 EEF1DP29692 281 aaKnown RBP22.49■■□□□ 1.19
LSM4-202ENST00000593564 PTGER4P35408 488 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 AP1S2P56377 157 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 TAS2R50P59544 299 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 PWP1Q13610 501 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 C3AR1Q16581 482 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 KRTCAP3Q53RY4 240 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 XKRXQ6PP77 449 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 STRA8Q7Z7C7 330 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 GALNT7Q86SF2 657 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 TBC1D20Q96BZ9 403 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 SNF8Q96H20 258 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 MAGED4Q96JG8 741 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 HES7Q9BYE0 225 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 ANKRD10Q9NXR5 420 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 ARL15Q9NXU5 204 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 ZNF835Q9Y2P0 537 aa22.49■■□□□ 1.19
LSM4-202ENST00000593564 PCNX1Q96RV3 2341 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 TRBC2A0A5B9 178 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 PABPN1LA6NDY0 278 aaKnown RBP22.48■■□□□ 1.19
LSM4-202ENST00000593564 CDK2AP1O14519 115 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 OR1F1O43749 312 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 AHSGP02765 367 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 OR4D2P58180 307 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 SLC26A5P58743 744 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 IL2P60568 153 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 SKP1P63208 163 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 ALDH6A1Q02252 535 aaKnown RBP22.48■■□□□ 1.19
LSM4-202ENST00000593564 SPANXN3Q5MJ09 141 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 SPINK14Q6IE38 97 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 NIPAL1Q6NVV3 410 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 HORMAD2Q8N7B1 307 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 TMEM178AQ8NBL3 297 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 PYCR2Q96C36 320 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 OR4K3Q96R72 315 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 PKDREJQ9NTG1 2253 aa22.48■■□□□ 1.19
LSM4-202ENST00000593564 FAM227AF5H4B4 570 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 ALOX12P18054 663 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 AGAP20933 346 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 JAK1P23458 1154 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 ADORA2A-AS1P86434 159 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 MEF2AQ02078 507 aaPredicted RBP22.47■■□□□ 1.19
LSM4-202ENST00000593564 Q6ZPB1 254 aaPredicted RBP22.47■■□□□ 1.19
LSM4-202ENST00000593564 TBC1D19Q8N5T2 526 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 ACTRT1Q8TDG2 376 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 FBXL8Q96CD0 374 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 FRMD6Q96NE9 622 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 NAT9Q9BTE0 207 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 TINAGQ9UJW2 476 aa22.47■■□□□ 1.19
LSM4-202ENST00000593564 GOLGA6L10A0A0M3HER8 536 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms