RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 CCNYL2Q5T2Q4 361 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 ZNF776Q68DI1 518 aaPredicted RBP18.91■□□□□ 0.62
CLIP3-206ENST00000593074 B3GNT6Q6ZMB0 384 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 TMEM179BQ7Z7N9 219 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 PNPT1Q8TCS8 783 aaKnown RBP18.91■□□□□ 0.62
CLIP3-206ENST00000593074 MBOAT4Q96T53 435 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 DPH2Q9BQC3 489 aaPredicted RBP18.91■□□□□ 0.62
CLIP3-206ENST00000593074 TEX101Q9BY14 249 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 OR51B5Q9H339 312 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 VCX3AQ9NNX9 186 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 ZNF282Q9UDV7 671 aaPredicted RBP18.91■□□□□ 0.62
CLIP3-206ENST00000593074 SERGEFQ9UGK8 458 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 RPS6KA6Q9UK32 745 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 PLAGL1Q9UM63 463 aa18.91■□□□□ 0.62
CLIP3-206ENST00000593074 CCDC160A6NGH7 325 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 GPR89AB7ZAQ6 455 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 RPN2P04844 631 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 GPR89BP0CG08 455 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 TEAD1P28347 426 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 VN1R5Q7Z5H4 357 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 ZNF740Q8NDX6 193 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 OR10Q1Q8NGQ4 319 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 GOT1L1Q8NHS2 421 aaPredicted RBP18.9■□□□□ 0.62
CLIP3-206ENST00000593074 TMIGD2Q96BF3 282 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 SH3BP4Q9P0V3 963 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 FZD4Q9ULV1 537 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 VPS4AQ9UN37 437 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 MYO9BQ13459 2157 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 REV3LO60673 3130 aa18.9■□□□□ 0.62
CLIP3-206ENST00000593074 H3BSA7 217 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 KLHL18O94889 574 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 FURINP09958 794 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 SHMT2P34897 504 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 PLCL1Q15111 1095 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 TTC23Q5W5X9 447 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 CWF19L1Q69YN2 538 aaKnown RBP18.89■□□□□ 0.62
CLIP3-206ENST00000593074 FAM71E1Q6IPT2 247 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 SDE2Q6IQ49 451 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 TMIGD1Q6UXZ0 262 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 R3HCC1LQ7Z5L2 792 aaKnown RBP18.89■□□□□ 0.62
CLIP3-206ENST00000593074 HIPK1Q86Z02 1210 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 WDR48Q8TAF3 677 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 GANCQ8TET4 914 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 EZH1Q92800 747 aaPredicted RBP18.89■□□□□ 0.62
CLIP3-206ENST00000593074 MBNL1Q9NR56 388 aaKnown RBP18.89■□□□□ 0.62
CLIP3-206ENST00000593074 TM7SF3Q9NS93 570 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 ATAD3AQ9NVI7 634 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 FAM118AQ9NWS6 357 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 CLDND1Q9NY35 253 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 AP1M2Q9Y6Q5 423 aa18.89■□□□□ 0.62
CLIP3-206ENST00000593074 TRPM6Q9BX84 2022 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 NUP214P35658 2090 aaPredicted RBP18.89■□□□□ 0.61
CLIP3-206ENST00000593074 KLHL33A6NCF5 533 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 E2F6O75461 281 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 HSD17B2P37059 387 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 RPL3P39023 403 aaKnown RBP18.89■□□□□ 0.61
CLIP3-206ENST00000593074 SPIDRQ14159 915 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 C16orf72Q14CZ0 275 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 RGNQ15493 299 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 CYP2A13Q16696 494 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 SHQ1Q6PI26 577 aaKnown RBP18.89■□□□□ 0.61
CLIP3-206ENST00000593074 CBLL1Q75N03 491 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 EIF3MQ7L2H7 374 aaKnown RBP18.89■□□□□ 0.61
CLIP3-206ENST00000593074 OR4A15Q8NGL6 344 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 C16orf78Q8WTQ4 265 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 MENTQ9BUN1 341 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 VNN3Q9NY84 501 aa18.89■□□□□ 0.61
CLIP3-206ENST00000593074 IFT80Q9P2H3 777 aaPredicted RBP18.89■□□□□ 0.61
CLIP3-206ENST00000593074 TDRKHQ9Y2W6 561 aaKnown RBP18.89■□□□□ 0.61
CLIP3-206ENST00000593074 SAP18O00422 153 aaKnown RBP18.88■□□□□ 0.61
CLIP3-206ENST00000593074 KMOO15229 486 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 NOBOXO60393 691 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 PAK4O96013 591 aaPredicted RBP18.88■□□□□ 0.61
CLIP3-206ENST00000593074 GBAP04062 536 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 NTSR1P30989 418 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 TRIM23P36406 574 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 KRT78Q8N1N4 520 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 AMBRA1Q9C0C7 1298 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 GABARAPL1Q9H0R8 117 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 WDR26Q9H7D7 661 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 FBXL12Q9NXK8 326 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 ABCG2Q9UNQ0 655 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 PTX3P26022 381 aaPredicted RBP18.88■□□□□ 0.61
CLIP3-206ENST00000593074 HLCSP50747 726 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 IRF4Q15306 451 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 KIAA1211LQ6NV74 962 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 GALNT10Q86SR1 603 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 MTERF3Q96E29 417 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 PELI2Q9HAT8 420 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 TM9SF3Q9HD45 589 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 RSL24D1Q9UHA3 163 aaKnown RBP18.88■□□□□ 0.61
CLIP3-206ENST00000593074 TMEFF2Q9UIK5 374 aaPredicted RBP18.88■□□□□ 0.61
CLIP3-206ENST00000593074 C3orf18Q9UK00 162 aa18.88■□□□□ 0.61
CLIP3-206ENST00000593074 ZFR2Q9UPR6 939 aaKnown RBP18.88■□□□□ 0.61
CLIP3-206ENST00000593074 NUDT7P0C024 238 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 PCGF2P35227 344 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 PIGAP37287 484 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 CDK9P50750 372 aaKnown RBP18.87■□□□□ 0.61
CLIP3-206ENST00000593074 HBA1P69905 142 aa18.87■□□□□ 0.61
CLIP3-206ENST00000593074 DMPKQ09013 629 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms