RNA–Protein interactions for RNA: ENST00000588410.1

TPM4-208, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-208ENST00000588410 DNAJB14Q8TBM8 379 aa18.49■□□□□ 0.55
TPM4-208ENST00000588410 NT5CQ8TCD5 201 aa18.49■□□□□ 0.55
TPM4-208ENST00000588410 PPP4R1Q8TF05 950 aa18.49■□□□□ 0.55
TPM4-208ENST00000588410 RHBDF1Q96CC6 855 aa18.49■□□□□ 0.55
TPM4-208ENST00000588410 MOCOSQ96EN8 888 aa18.49■□□□□ 0.55
TPM4-208ENST00000588410 CNDP1Q96KN2 507 aa18.49■□□□□ 0.55
TPM4-208ENST00000588410 CAPS2Q9BXY5 557 aa18.49■□□□□ 0.55
TPM4-208ENST00000588410 ZNF700Q9H0M5 742 aa18.49■□□□□ 0.55
TPM4-208ENST00000588410 SPNS1Q9H2V7 528 aa18.49■□□□□ 0.55
TPM4-208ENST00000588410 TENM4Q6N022 2769 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 FER1L5A0AVI2 2057 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 A0A1W2PQ72 361 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 ZNF860A6NHJ4 632 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 WISP3O95389 354 aaPredicted RBP18.48■□□□□ 0.55
TPM4-208ENST00000588410 PRR35P0CG20 571 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 CD1DP15813 335 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 IL10P22301 178 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 GNLYP22749 145 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 GDF5P43026 501 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 MFAP5Q13361 173 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 UBAP2LQ14157 1087 aaKnown RBP18.48■□□□□ 0.55
TPM4-208ENST00000588410 ZKSCAN8Q15776 578 aaPredicted RBP18.48■□□□□ 0.55
TPM4-208ENST00000588410 C18orf21Q32NC0 220 aaPredicted RBP18.48■□□□□ 0.55
TPM4-208ENST00000588410 DEFB134Q4QY38 66 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 CRB2Q5IJ48 1285 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 IGFL2Q6UWQ7 119 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 CISD2Q8N5K1 135 aaKnown RBP18.48■□□□□ 0.55
TPM4-208ENST00000588410 MNS1Q8NEH6 495 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 LMF1Q96S06 567 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 CYTH2Q99418 400 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 TUBB6Q9BUF5 446 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 CD274Q9NZQ7 290 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 RNF112Q9ULX5 631 aa18.48■□□□□ 0.55
TPM4-208ENST00000588410 GALR3O60755 368 aaPredicted RBP18.47■□□□□ 0.55
TPM4-208ENST00000588410 FAM155BO75949 473 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 C1QAP02745 245 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 ZNF888P0CJ79 500 aaPredicted RBP18.47■□□□□ 0.55
TPM4-208ENST00000588410 C1GALT1C1LP0DN25 315 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 CRABP2P29373 138 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 HNF4AP41235 474 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 SLC6A12P48065 614 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 CDC16Q13042 620 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 PCOLCEQ15113 449 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 CDKL4Q5MAI5 379 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 SULT1C3Q6IMI6 304 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 RIPOR1Q6ZS17 1223 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 CEP128Q6ZU80 1094 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 CPEB2Q7Z5Q1 589 aaKnown RBP18.47■□□□□ 0.55
TPM4-208ENST00000588410 TBC1D1Q86TI0 1168 aaPredicted RBP18.47■□□□□ 0.55
TPM4-208ENST00000588410 KLHDC8AQ8IYD2 350 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 KRT78Q8N1N4 520 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 AFAP1L2Q8N4X5 818 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 BRIX1Q8TDN6 353 aaKnown RBP18.47■□□□□ 0.55
TPM4-208ENST00000588410 SNRNP40Q96DI7 357 aaKnown RBP18.47■□□□□ 0.55
TPM4-208ENST00000588410 PEX11GQ96HA9 241 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 OR1F2PQ96R84 312 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 DNAJC11Q9NVH1 559 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 PTGFRNQ9P2B2 879 aa18.47■□□□□ 0.55
TPM4-208ENST00000588410 MTRF1LQ9UGC7 380 aaKnown RBP18.47■□□□□ 0.55
TPM4-208ENST00000588410 COPG1Q9Y678 874 aaKnown RBP18.47■□□□□ 0.55
TPM4-208ENST00000588410 CLGNO14967 610 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 PHBP35232 272 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 UQCRFS1P47985 274 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 AGTR2P50052 363 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 ARG2P78540 354 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 TLR1Q15399 786 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 OR4D1Q15615 310 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 SLCO4C1Q6ZQN7 724 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 CUZD1Q86UP6 607 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 FAM26EQ8N5C1 309 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 SIRT6Q8N6T7 355 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 SNX31Q8N9S9 440 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 ANKRD53Q8N9V6 530 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 TTLQ8NG68 377 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 OR5T3Q8NGG3 340 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 EXT2Q93063 718 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 KIAA1191Q96A73 305 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 MRRFQ96E11 262 aaKnown RBP18.46■□□□□ 0.55
TPM4-208ENST00000588410 C19orf60Q96EN9 201 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 RBCK1Q9BYM8 510 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 NMRAL1Q9HBL8 299 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 ZDHHC18Q9NUE0 388 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 GPRC5BQ9NZH0 403 aa18.46■□□□□ 0.55
TPM4-208ENST00000588410 DYTNA2CJ06 578 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 TAPBPO15533 448 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 CHST10O43529 356 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 STK16O75716 305 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 CDC123O75794 336 aaPredicted RBP18.45■□□□□ 0.54
TPM4-208ENST00000588410 SEC24DO94855 1032 aaPredicted RBP18.45■□□□□ 0.54
TPM4-208ENST00000588410 TUBB4AP04350 444 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 FHP07954 510 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 SERPINA6P08185 405 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 JAK1P23458 1154 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 HSPA7P48741 367 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 RAB8AP61006 207 aa18.45■□□□□ 0.54
TPM4-208ENST00000588410 ACTN3Q08043 901 aaPredicted RBP18.45■□□□□ 0.54
TPM4-208ENST00000588410 SLBPQ14493 270 aaKnown RBP eCLIP18.45■□□□□ 0.54
TPM4-208ENST00000588410 ZNF169Q14929 603 aaPredicted RBP18.45■□□□□ 0.54
TPM4-208ENST00000588410 EFTUD2Q15029 972 aaKnown RBP eCLIP18.45■□□□□ 0.541e-7■■■□□ 17.1
TPM4-208ENST00000588410 NSDHLQ15738 373 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms