RNA–Protein interactions for RNA: ENST00000570676.1

RAB40B-203, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40B, Length 1,104 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-203ENST00000570676 TRIM54Q9BYV2 358 aa14.39□□□□□ -0.11
RAB40B-203ENST00000570676 PARVBQ9HBI1 364 aa14.39□□□□□ -0.11
RAB40B-203ENST00000570676 MRPS30Q9NP92 439 aaKnown RBP14.39□□□□□ -0.11
RAB40B-203ENST00000570676 UTP6Q9NYH9 597 aaKnown RBP14.39□□□□□ -0.11
RAB40B-203ENST00000570676 G3BP2Q9UN86 482 aaKnown RBP14.39□□□□□ -0.11
RAB40B-203ENST00000570676 OARD1Q9Y530 152 aa14.39□□□□□ -0.11
RAB40B-203ENST00000570676 HYKKA2RU49 373 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 VSTM2BA6NLU5 285 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 SYCE1LA8MT33 242 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 SUPT3HB4E1H0 165 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 PEX12O00623 359 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 SOCS6O14544 535 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 SUPT3HO75486 399 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 IGHEP01854 428 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 ENO2P09104 434 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-203ENST00000570676 PIM1P11309 404 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-203ENST00000570676 IMPA1P29218 277 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 HSD17B2P37059 387 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 UQCRFS1P47985 274 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 SOX8P57073 446 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 TSTA3Q13630 321 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-203ENST00000570676 MYBPC3Q14896 1274 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 PPP1R3AQ16821 1122 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 FAM214AQ32MH5 1076 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 PRR30Q53SZ7 412 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-203ENST00000570676 FBXO42Q6P3S6 717 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 TMEM151AQ8N4L1 468 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 CLEC1AQ8NC01 280 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 CPT1CQ8TCG5 803 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 MGARPQ8TDB4 240 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 MCOLN3Q8TDD5 553 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 ATOH8Q96SQ7 321 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 SOX17Q9H6I2 414 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-203ENST00000570676 ZNF552Q9H707 407 aaPredicted RBP14.38□□□□□ -0.11
RAB40B-203ENST00000570676 CD274Q9NZQ7 290 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 LUZP4Q9P127 313 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 C5AR2Q9P296 337 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 MID2Q9UJV3 735 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 NXT1Q9UKK6 140 aaKnown RBP14.38□□□□□ -0.11
RAB40B-203ENST00000570676 PDE10AQ9Y233 779 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 MAP4K5Q9Y4K4 846 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 HS3ST3B1Q9Y662 390 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 MAU2Q9Y6X3 613 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 RELNP78509 3460 aa14.38□□□□□ -0.11
RAB40B-203ENST00000570676 TTLL8A6PVC2 850 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 ZNF839A8K0R7 811 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 CYSRT1A8MQ03 144 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 H0YGG7 62 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 UBXN8O00124 270 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 SMIM24O75264 130 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 ALOX12BO75342 701 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 CCNDBP1O95273 360 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 GUCA1CO95843 209 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 HIST1H2AGP0C0S8 130 aaPredicted RBP14.37□□□□□ -0.11
RAB40B-203ENST00000570676 SBK3P0C264 359 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 MYL2P10916 166 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 CPA3P15088 417 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 TAC1P20366 129 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 HIST1H2ADP20671 130 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 ARF3P61204 181 aaPredicted RBP14.37□□□□□ -0.11
RAB40B-203ENST00000570676 PRDX1Q06830 199 aaKnown RBP14.37□□□□□ -0.11
RAB40B-203ENST00000570676 TGFBIQ15582 683 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 HHATQ5VTY9 493 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 ZYG11AQ6WRX3 759 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 SHISA6Q6ZSJ9 500 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 ATCAYQ86WG3 371 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 ARHGEF39Q8N4T4 335 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 ARFGAP2Q8N6H7 521 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 RDH11Q8TC12 318 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 PNPLA2Q96AD5 504 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 NACC2Q96BF6 587 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 HIST1H2AHQ96KK5 128 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 OR2A5Q96R48 311 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 HIST1H2AJQ99878 128 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 PAIP2Q9BPZ3 127 aaKnown RBP14.37□□□□□ -0.11
RAB40B-203ENST00000570676 MESP1Q9BRJ9 268 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 H2AFJQ9BTM1 129 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 MFRPQ9BY79 579 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 CUEDC1Q9NWM3 386 aaPredicted RBP14.37□□□□□ -0.11
RAB40B-203ENST00000570676 ARL15Q9NXU5 204 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 FAM53CQ9NYF3 392 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 NUDT4Q9NZJ9 180 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 STOX2Q9P2F5 926 aaPredicted RBP14.37□□□□□ -0.11
RAB40B-203ENST00000570676 FBXL4Q9UKA2 621 aa14.37□□□□□ -0.11
RAB40B-203ENST00000570676 RUVBL1Q9Y265 456 aaKnown RBP14.37□□□□□ -0.11
RAB40B-203ENST00000570676 IGLV3-12A0A075B6K2 115 aa14.36□□□□□ -0.11
RAB40B-203ENST00000570676 NCF1BA6NI72 391 aaPredicted RBP14.36□□□□□ -0.11
RAB40B-203ENST00000570676 NCF1CA8MVU1 366 aaPredicted RBP14.36□□□□□ -0.11
RAB40B-203ENST00000570676 G3V2L1 256 aa14.36□□□□□ -0.11
RAB40B-203ENST00000570676 P2RX6O15547 441 aa14.36□□□□□ -0.11
RAB40B-203ENST00000570676 S100BP04271 92 aaPredicted RBP14.36□□□□□ -0.11
RAB40B-203ENST00000570676 EIF2S1P05198 315 aaKnown RBP14.36□□□□□ -0.11
RAB40B-203ENST00000570676 GFAPP14136 432 aa14.36□□□□□ -0.11
RAB40B-203ENST00000570676 NCF1P14598 390 aaPredicted RBP14.36□□□□□ -0.11
RAB40B-203ENST00000570676 EZRP15311 586 aaKnown RBP14.36□□□□□ -0.11
RAB40B-203ENST00000570676 ETV4P43268 484 aa14.36□□□□□ -0.11
RAB40B-203ENST00000570676 EMP3P54852 163 aa14.36□□□□□ -0.11
RAB40B-203ENST00000570676 AP1S2P56377 157 aa14.36□□□□□ -0.11
RAB40B-203ENST00000570676 WDR4P57081 412 aaKnown RBP14.36□□□□□ -0.11
RAB40B-203ENST00000570676 UBAP2LQ14157 1087 aaKnown RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms